Dlut000399.1
Basic Information
- Insect
- Dyspetes luteomarginatus
- Gene Symbol
- -
- Assembly
- GCA_963669185.1
- Location
- OY769903.1:4064064-4067745[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-11 2.1e-08 33.8 0.0 5 37 21 52 17 54 0.93 2 2 7.8 6.7e+03 -3.0 0.1 30 36 333 339 333 341 0.87
Sequence Information
- Coding Sequence
- ATGCCAGTTTGGCCAGGTCAGCGAGTCAGACATGGAAGTTATGCGGACGATCCTAATCTCATGAGACGAGCGATAGAGGCTGTGAGGAATGGATTATCATTGAGAAAAGCAGCCGCAATGTTTTCCGTGACAAAATCGAGTCTTCATCGTCATCTTCACATGGATGCAAGAATGGCGGGACTGTTGAGCTCCCAGAGGGTCACGTATCCTTGCAAGAATTGCGGCAAGATTTACAACTACTACTCGAGCTTGGCGAGACACTTGAAACACGAGTGCGGAGTTGAGCccaaatttcattgtccattGTGCTCTTACAGAACAAAGCACAAATCGAGTCTGAATACGCATCTTAATGGTAGACACATGAAGCTGGTGAATGATTATTACGTCATGCCTAATGGCAATGGATCATCGTCAAATCACAATGTACCGGAGATGTATGGAATCGGATCGATGATGGGTCCAAGAAGATTACGAGGACAGGGACGTATGATTTGCGAAAATTGCGGCAGACGTTATCATCAAGCGAAAAATCTCAGAAGACACATGATGAACGAGTGTGGCAAAACGCCGAGTCTTCAATGCTCTTATTGTCCCTACAAAGCTACGTACAAATCATATCTCGAGATTCACATGACGAAACACACGAGAAATCAACAATTCGAACGTAAGTACAGCGCGTCAAATTGGACAGTGCCAACATTGCCATCGACATCGACGGATTATTTTGGAAGGCGTCTACGCTCGACGACTCATAGCGCCGAAGGAACGGAACTTCTTAATCCGGGATATCGTCGTCttggaacgaaaaaatatctttgccTCGATTGTGGCAGTACTTTTGCTCTGAAAGCATCGTTAATGCGTCATCAATATCTCGAGTGTACAAAGACACCACCCCCGAAGAAACGTCGAACCGAGCCGTGCAAACCAACCACTGATAAGAAACCACCGAAAAAGCACGATTGCGCAAATTGCGGTCGCACTTATGCATTTTACACCTCATTATGGCGACATCAGAATTACGAGTGCGGAATGGAGCCAAAATTTGATTGCACCAtttgtcaaattaaatttgcccAAAAGAGCAATCTCGATCGTCACATGCGCAATCGACACAGCTCGACAATGATCACTCcgcaaatttaa
- Protein Sequence
- MPVWPGQRVRHGSYADDPNLMRRAIEAVRNGLSLRKAAAMFSVTKSSLHRHLHMDARMAGLLSSQRVTYPCKNCGKIYNYYSSLARHLKHECGVEPKFHCPLCSYRTKHKSSLNTHLNGRHMKLVNDYYVMPNGNGSSSNHNVPEMYGIGSMMGPRRLRGQGRMICENCGRRYHQAKNLRRHMMNECGKTPSLQCSYCPYKATYKSYLEIHMTKHTRNQQFERKYSASNWTVPTLPSTSTDYFGRRLRSTTHSAEGTELLNPGYRRLGTKKYLCLDCGSTFALKASLMRHQYLECTKTPPPKKRRTEPCKPTTDKKPPKKHDCANCGRTYAFYTSLWRHQNYECGMEPKFDCTICQIKFAQKSNLDRHMRNRHSSTMITPQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629357;
- 90% Identity
- iTF_00629357;
- 80% Identity
- iTF_00629357;