Dlut014575.1
Basic Information
- Insect
- Dyspetes luteomarginatus
- Gene Symbol
- lola
- Assembly
- GCA_963669185.1
- Location
- OY769910.1:21228642-21235524[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-16 2.5e-13 49.6 0.0 2 42 437 478 436 481 0.94 2 2 4 3.5e+03 -2.1 0.0 30 42 481 494 480 495 0.77
Sequence Information
- Coding Sequence
- atgtctatgcaACAGTTCTGTTTACGATGGAATAATCACCAGCCAAATTTCATATCCGTCTTCTCGTCGCTGCTGAACAATGAGACTCTGGTGGACGTAACTTTGGCCGCTGAGGGTCGTCATCTTCAAGCTCACAAAGTCGTACTATCGGCGTGCAGCACATACTTTCAGTCCCTCTTCACCGTCAATCCCTGTCAGCATCCTATCGTCATTCTCAAAGATGTCAAATTCTCCGATCTCAAGATTATGGTTGATTTCATGTATTACGGCGAAGTGAATGTTTCACAGGATCAATTGCCCTCGATAATCAAGACAGCAGAGAGCTTGAAGATTAAGGGCCTTGCGGAGATGCACACAGCCTCTCTGACAAAGTGGCCAAGTGGAAATAGCGAAGCTGGTGGTGGAGATCGCGGCGAGTCGTGTTCACCAAGTCCCTCGCCCTTGTCCCCATCATTTCGTAGGAAACGTTTGCGAAAAACATCGACAGGTTCGACGTCCGGTGGTTCGGCCGAAAAAACTGAGGAAATAAACGAGATAACTCTCGTTGCAACAAATATTGTTAAACCGGAGCCGCACATTGTGCCGCAAGAGGGCGGTGAAAATTTGAGGCGTCCTATGAACGCAACGACCGATACACAAGGCAGCATTGACGAGGATCAAATATCGATTATGAGCAACATGGAAAGCAGCACGACGACGACACCAGCCCAGAGTGAAGGTTCTTTGCAGGACGTGAGTCACCACCCTGGTGGAAATATAGGCCACAGTTCGGTGTCTTCTCAGCCACCAGCACACCAAGGATTGCAATGGACAATAATGGAGCATACGTATCCTCGTTTCGCTCTGTCATCGTGTCAAACGAATCTGTCGGTCCAAGCCACATCGGCATTCACATCACCCGAAATAACAGCGACATCGAGCATCAGCGAGCATCAATATCAATCTGGAGGTGGTGGTACGGGAACAACATCGGGCTCAAGTTGTGCATTAACGAATTATGGAAATTCATCATCGCACGGATCGATGCAGCACGGTGGTTCGAATTCAAACGGTGGTAATGGCGGCGGCGGTGGCgtcggtggtggtggtggtgggggtgggggtggttCTGGTGGAAATGGCAGCGGAAACAGCGGAGCTGGTAACGGAAACGGCACCGGAAATGGCGGTGGTAATAatgggggaggaggaggaggaggaaatgGCGGTCCATCACCAGGACCAACAAATTGTCCCTCAAATTGTCAAAGTCCATGCGCCAGTCCACAAGCaacgataaagagaaaaagatcgaCAAATCCTCAggctgatgaaaatttcattcgtgcTCTTGAGGCTGTGCGCTATGGCGGGATAGGATTTTGCAAAGCTGCTCGTATGTTTGGCGTCAATAATCGAACCCTCTGGCTCGAGTATAAAAAACGCGGCTATCCAAATAATCGCCCGAGTCTCAAGTCACGGGTTAAGCAAGAAACAACATCGTCACCACCGCCAGCATCCTCGTCGACGCAATCTGTTAATTCGCAAAGTCCAACGCCAATGGGACCACCAACGACACCACACAGTACACACAATACACATCCGACTCATACAATGCTGACTGCTCACACACCCCACACTATGCTATCCGGTTATATCGACAGTAGACACACCGATTATACATTACCGAGCTCTACAATGCCAATTAATCTTCATGGCGTTAATTACAATTCTATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSSLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGNSEAGGGDRGESCSPSPSPLSPSFRRKRLRKTSTGSTSGGSAEKTEEINEITLVATNIVKPEPHIVPQEGGENLRRPMNATTDTQGSIDEDQISIMSNMESSTTTTPAQSEGSLQDVSHHPGGNIGHSSVSSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSVQATSAFTSPEITATSSISEHQYQSGGGGTGTTSGSSCALTNYGNSSSHGSMQHGGSNSNGGNGGGGGVGGGGGGGGGGSGGNGSGNSGAGNGNGTGNGGGNNGGGGGGGNGGPSPGPTNCPSNCQSPCASPQATIKRKRSTNPQADENFIRALEAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQETTSSPPPASSSTQSVNSQSPTPMGPPTTPHSTHNTHPTHTMLTAHTPHTMLSGYIDSRHTDYTLPSSTMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629212;
- 90% Identity
- iTF_01057005;
- 80% Identity
- iTF_00629212;