Basic Information

Insect: Dyspetes luteomarginatus
Gene Symbol: klhl36
Assembly: GCA_963669185.1
Location: OY769912.1:11627125-11630826[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 5.7 5e+03 -2.6 0.0 28 42 13 27 13 29 0.82

2 6 0.62 5.4e+02 0.5 0.3 31 45 226 240 225 240 0.90

3 6 1.5e-07 0.00013 21.7 0.0 20 37 261 279 244 286 0.84

4 6 2e-09 1.7e-06 27.7 0.0 5 38 297 329 294 335 0.92

5 6 0.015 13 5.7 0.0 20 34 363 377 350 383 0.80

6 6 1.5e-10 1.3e-07 31.2 0.1 4 39 408 443 405 449 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	5.7	5e+03	-2.6	0.0	28	42	13	27	13	29	0.82
2	6	0.62	5.4e+02	0.5	0.3	31	45	226	240	225	240	0.90
3	6	1.5e-07	0.00013	21.7	0.0	20	37	261	279	244	286	0.84
4	6	2e-09	1.7e-06	27.7	0.0	5	38	297	329	294	335	0.92
5	6	0.015	13	5.7	0.0	20	34	363	377	350	383	0.80
6	6	1.5e-10	1.3e-07	31.2	0.1	4	39	408	443	405	449	0.92

Sequence Information

Coding Sequence: ATGAACCTCCGTTTTCGTCTTCGCGTAACTAGTCCCGTTCCAAATTCCGTTGTGCATTTTCGTGTTCGtcgtaaaaatgaaataaaaattgaacaagaaactgaaactgaaacggCCATGTCCGCAACAATAATAGAGATCGAGAGTCAACCTCAAGTTGAGGAGAGCTGCTCTTTTAAATGGACGGATTATCAGAATTACTTGTCGGACGTTGTTCGGCAGCTTCTCGCGGAGGAATGCATGGTCGACGTGACTCTCGTTGCGGAAGGCGAGCGCATACACGCTCATCGTATTGTACTGTGCTCTTGCAGTACTTTGTTTCAAGAAATACTTAGCGAGACGAATGACGAACATTCGACGATAATACTGAGCGATATTTCAGCACAGGATGTCCGCTCAATTGTAGAATTCAGCTATCATGGGGAAGTTAGAATTCCAGTTGAAAATATCACCCATTTACTCGAGGCTGCTCATTCGCTCAAAATTTGCGGTCTTATGGAGatcGACGGATTGGATGAAAATGATGCGATTATAACGACGAAAGACGAGGTGGGTGTGGATAATATTGATCCACTCGCCGATTGTGAGGAATCTTGTGATAATACGACAGAGTTTGTGGACGAGGAACTTTCGTACACAGAAGTAAGAGATATTTGCGAAGGAACGGAGCAGCCATCGACCgttaaaaagagaaaacgtCGGAAAGAGAGCGCAAAACGAGAATACACCGATGATATGTTGGAATCGGCGATAATCGATCTCAAAGCTGGTCGTACTCTCGTGAAAGCGGCaacgaaatataatattccacGTTCAACCCTTTACATGAGAGCCAAAGCGATGGGAATACAATTGAACGCTTCCAGAAATGAATATCCGGCTGAATGCATGAAAGCCGCCATTGATGCAGTTATCGCTGGTTGGAGTCTTCAGCACGCATCagaaaaatttttcataccaaAAACTGTGCTTTGGCGACGCATACAAAAAGACGGATATCAGATATTACGCTCAGAGGTGAAACGAGCTTATGGGGCTGAGAAGAGAGAGGCAGCAGTTAAGGCCCTCGAGAGAGGCGAAAATCTCACCAAAGTTGCACAAGAATTTCAGATACCAAAAACTACCCTCTTTCGTGACAAAGCGAGACTGGTTGACGAGGGTAAATTACCCGAGTCTTTTTggaagaaacgaaaaacaGGCGACGAGGTGGTGAAACGTTTGCGTCTGGAAGAGGCTGTGGCAGCCTGCAAAGGTGGCAGAATGTCTCAAGCTGCAGCATCGATGGCATACAGAATACCAAAAACTACGATATGGCGGCGATTGCAACAAGATGGAAAAACATCCGAGCGTGGTGCAGTCTCGAGAGAGATAACGGACGAAATCcgtgatgaggaaaaaaacgtaCAGGAAACTACAGAATTTTCACTCTGTGAGgtAACCTCGGAAATTCCAATAACGTACATAGACCAAAATTTACCGACTGATTCGGTAATAATTTTGACGACGGAAGACGTTGATGGCCTCAATCTCGAGGAGGGCAgacaaataattgtaaatcaAgattctGAACAGGATTATGTTGAATGCTCGCTGGACATAACTGGGAATAGCGTCGATTATCAGGCAGCCGAGAGCTAA
Protein Sequence: MNLRFRLRVTSPVPNSVVHFRVRRKNEIKIEQETETETAMSATIIEIESQPQVEESCSFKWTDYQNYLSDVVRQLLAEECMVDVTLVAEGERIHAHRIVLCSCSTLFQEILSETNDEHSTIILSDISAQDVRSIVEFSYHGEVRIPVENITHLLEAAHSLKICGLMEIDGLDENDAIITTKDEVGVDNIDPLADCEESCDNTTEFVDEELSYTEVRDICEGTEQPSTVKKRKRRKESAKREYTDDMLESAIIDLKAGRTLVKAATKYNIPRSTLYMRAKAMGIQLNASRNEYPAECMKAAIDAVIAGWSLQHASEKFFIPKTVLWRRIQKDGYQILRSEVKRAYGAEKREAAVKALERGENLTKVAQEFQIPKTTLFRDKARLVDEGKLPESFWKKRKTGDEVVKRLRLEEAVAACKGGRMSQAAASMAYRIPKTTIWRRLQQDGKTSERGAVSREITDEIRDEEKNVQETTEFSLCEVTSEIPITYIDQNLPTDSVIILTTEDVDGLNLEEGRQIIVNQDSEQDYVECSLDITGNSVDYQAAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00629227;
90% Identity: iTF_00629227;
80% Identity: iTF_00629227;