Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963669185.1
Location
OY769904.1:6793190-6806356[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-17 9.9e-15 54.1 0.1 1 45 608 653 608 653 0.96
2 2 2.1e-17 1.8e-14 53.3 0.0 1 43 1102 1145 1102 1147 0.94

Sequence Information

Coding Sequence
atgcataCTCGCCCGAGCTGTCCGCTAGATGGGTTAAGCGCGCTCATCATCGCGTTTGATGTCAGTTGCGGTGGTGTCGCAGGTCTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCGAATCAGCCCCATCATCGGCTGTATCCGGGTACTGCAATCTCGGGCTCTTGCAGCATTGGTACTGTGGGAGGGGGAAGTCTCGGTCACGTGACGGCGCAACGTCCCCCTTGTGTGATCGGCGAGCTGTCTCTGGGCCAGGGAGCATCGACGATCGAGTCACTGACGTTAACATCCTCGTCAGCAGCGATAATCTcctcctcgtcatcatcgagtacaacgacgacgacgacgacgacgacgacctcCTCGTGTGTGGCAACGGAAACGACAACGGCAACAACGACGGGCTCGTCACTTGTCGAttcgacaacgacgacggcAACAGCGGCAACGACGACgccaacgacgacgacgacgccatTGACGCCATTAAACAAGCTAAATCAGCTTCATCAACGAAATTCTACGTCACAATTGTCGAATCATCGTGGAAACgccaacgacgacgacgacgacgacgacgacgacgacgacaaacACGTTGTCAGTGCCAACGAAAATTCCGATATTCAGACCCGTTTAAGGCCCCAAGATATCAAACTCGAGATCGAGGAAAACGAGACAGTTGCGTTGTTACAAAGACAAGTACTTGGCACTTGTCTTGTTGCCAGACaaacaaacaacaacaacaacaacaacagcagcagcaacaacaacaacaacagccaAATACAACAAACTCAACGTGGCAGATCGATAAAGGAAGAGGAACGAGAATTCGAGGAGAACGAGAACGGGGAACGAGAGGATATCGAAGATATcgcgacagagggacaaaaGAGATTGAAAATTACCGAGGAATCGTCTCATCATACTGGTGGACAAATTACCACGAGATTATCGGCAAGTCCCCTCAGGGAAAACGAGACGAGACGAACGTCCATCAGGGAACGAGAGACGAACGATCTCGTCGATACGATAGGGACCAAGACAGAGGAACGGATAGACTTGCCGACGAGCGGTCTGTTGAGGGTAAAGAAAGAGGAGGAATTACAGGAAGTTCCACGTACATTGAGCTGTGGCGTCGATGCATCGACGATCGTGAGATTATCAAATATTGCCGATGCGAGCAATTcggaaatttgcaaaatttcggAAATAGCCGGAGGGGATACGAGCTTGCCATATCTCGTAAATCGTCGTACGAGCCCACCACCCGAGGACTGGAAACCACTCGACAAGTGTTTCTTCTGTCTCGATGGAAAACTACCCCACGACGAGCAGCCACCCCTTaGTCCTCAGAGCGAGAGTAGCAGCAGTTCGCGATCGGCAGAATCACCGATGTCAGTCCAAGTCGATCCAATGGCGGCATCGGTCGTTGCTGCTGCCCTCAGCGGAACTTATCCGACTTTGCTGCCACAGTGGTGTTTGCCACCGAGGGAATCACCCCTTGTCGCTGTCCAGAGCCATCAGGATGGCTCATCAGGACTCGATCAACCCCTTGACCTCTCGGCAAAGCCGAAAAATTCTCAGGACAACAACATTGTAACGATGTcgaagcaacaaaaaataccTCTGAGGATGCCGGCGGGCCTCGATCCCAAGAGCATCTTCACCTCGTCGTATCGCGGAAAGCCGCGAATGACTGGGCCAGTTGGTGTCGGCGGTGTTGCCGTAGTCGGTGCTGGGGGCAGTAGAAGGACCTACACCGAGGAGGAATTACAGGCTGCACTGAGAGACATACAGAGTGGAAAGCTTGGAACTCGCAGGGCAGCTGTTATCTATGGAATACCAAGGAGCACACTGAGAAATAAGGTGTACAAGCTGGCAATGGAGCGTGAGAGGGACGCAACCCTAAATAGCACCCATTCACACCCCCACGAGTCCGGTCTCCAAGCCTCAACCACCACCAtgacaacaacaacatcaacATCAATATcaacatcaacaacaacaacaacaacaacaacagcaacaacaacaacaacaacagcaagaacaacatcaacaacaacacCAAATACCATCCAAAATGCCTCCGCTACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACTTGGCCACTTGACGTCCGCGAGGTTGCGAGACTCGAGgCTGACGATAAGGATCTTTCGGGTGCCGAGGAAGAGAAGGAAGTTGAAAAAGCATTGCTGAGGCCTCTTTTGTCACTGGAGGATCTCGTGAGATTTTCCGCCCTCGAAGGTAGCGGCAGTGATTCCTTAAGGACTTTGTTACAACGAGGTCAAGAGACTGGAACAGAATGGCCGGGTTTCGAGCATGCAAACATTGGGCCTTACATTCAAAAAATGCTCGCAGCCGCTGCACCATTTAAGGGCTTGGAGACTCCGGATTATAGAATACCGGAAGTGATGAGACGATTGATGAGCGAAGACAAGAGGCTGAACAGGGATGTGAATGGTGATAATTTGCagcagcatcatcatcatcatcatcatatgCAACATtcacatcatcatcatcatcatcagcaggCCCAGCAGGCCCAACAGGCCCAgcaaaaattgagagaaaaatcgcAGCATCAACAGCACAGAGGAGCGATAACGAATGATGATTTTAATCCCAGCATCGAGGAGGAAGCTAGTGACAGTGGACAGGGAAGAgcgatattaaaaattccgTCCTACAAGCCAGCAAGCTCGAGCACACAAGGCTCGAGTAAAAACAATGGCGAGCCAACATCAGCTGCTTTTGCCCAAAGTTTTGCCCAAAGTGGCGGTGGGGGTGGTGGGGGTGGTGGAGGGATAAGCGCAGCCGGAAGtccaaatttaattgaacGCGCAAGTCCAGCATATTCTGGAACGAGCAGCCCGACAAATTCTCTCGTTGGCAAATCAGCAGCTTCCGGTGGTGTTAATTTTCGCGATGTCATTGCCAAAAGTATAAGCGTTAAATTTCAAGAGGGTCAAAGTGTCATTGGGAGCAGCAGCGGCCAAGGGGGTGGAATAGTTCAAAGTTCAGCCTCGATGATGACTGACGGGGTCATCAATCCATTTAAAAGAGGAAGATACACCCCGCCACAAacccaacaacaacaacaacaacaacaatcacACCAGCAAAAACAACAATCTCATGATAAATCAAAACAAAATTCTGGTGGTGGCAAAGGGACTCGACctaaaagaggaaaatatcGTAATTACGACAGGGATAGCCTAGTCGAGGCTGTAAGGGCTGTCCAAAGGGGTGAAATGAGCGTTCACAGAGCTGGTAGCTTTTACGGCGTGCCACATTCTACCCTCGAGTACAAAGTCAAAGAGAGACATCTCATGAGACCGAGAAAGAGgGATCAGAAACAGCCCGATGACAAATCGAAAGAATCGGCAGGTGGAGGAGGCTCGATGCGTTCCAGCTTAACCGATAAAAAGCCATCACAGTTGAAGCCACAAAAGCCATTtgcatcgtcatcatcgtcaccaggtggaggaggaggaggaggaggaggaggaggaattCCTGGTGGTCCAAACGGTCTCAAAATGCCACAATTTCTCGATGGTATGACACCTCTGCCATTTCCTcatccatttaatttttgggGACCTACGGCATTCATGCCAGCGCCATTTATGACTGGTGGCCCGAGCGTCCCGTCCATTATGCCTGAGCAATATTTCGCTACACAGCGAATGCGAGGACTTCAAGAACAGCAGAGAAGTGCAATTGTCCAGCAAGCTCAGCGTGAACGCGATGGTGGAAATGGGCCTGAGGCTGGTACATCAAATTCAAGGGGATCCTCAATGGTTAAATCAACGAGGGAAATTGCTGAAAGTCTTTACGATGGTACAGGAGCAAATGGAAGTTTTCTCGACAATCTCATAAGATCGAGTCTCGAGACTGGAATACCGAGAGATCAAAGGGCAATGGCTGAAGCACGAAAtaatcaacaacaacaattacaactccaacaacaacaaatgcAACGTGAAAGAGATCAAAGAGATCATTTGCCTGAAGCAATGAGCAGCAAAGCATTGATCGATCAATTGTGTAGAAATTCAAGACGCACCCCATTGCCACGTATGACACATGACAGTAGCGAGGATGAGAGTTATCGAAATCCAACAAATTTACGTACTTCGATACCTGAGAGACCCGAGAGAGTACCAACTGTCGATCTCAGCCAATCGCCAACTGAAAGAACTACGAGAACACTCGATGATCAGTCCAATGATCGTTTGACCTCACCCCCGACCCCTTTGTCAATAACACGAACTGGCAGCAGGGATGATGACACGAGAGACTCGATCAGAATTGATCGTGGCAGCAGAGAACGTGAAATTCATAATGGCggacagcagcagcaacagcagcagcaacaacaacaactacAGGATGATCGAGAACATAGAAAAACAATTGGCAGTATGCAAACTCAACAGATCAATCATTATTCTGATATGAATAATCTCTACGTCCTgtcaagtgagaaaaaaagtgcCTGTGATAATAAGCTTATAGTCGATCATTCGAGCCAAAAGActcaacagcagcagcagcagcaacagcagcagcaacagcagcagcagcagcaacagcagcagcagcagcaacagcagcaacagcagcagcagcaaaaagaattttctgcAGTTGGTGGTCTCGTTGTCCAACTCCAGAGAGGCTACAATACTGGCCCAAGTCGAACGACCAATGACCAAATGagccaaaataataattctcaatcAAATCCAACCGTTCAACAAAATATTGGAAGCCAGGAACAACGAGGATCGACTCTTCTCACCATGGACGATTCCGTAGAGCagtaa
Protein Sequence
MHTRPSCPLDGLSALIIAFDVSCGGVAGLERVAEELMGRRRWKQYQDTLYSSTRSESANQPHHRLYPGTAISGSCSIGTVGGGSLGHVTAQRPPCVIGELSLGQGASTIESLTLTSSSAAIISSSSSSSTTTTTTTTTTSSCVATETTTATTTGSSLVDSTTTTATAATTTPTTTTTPLTPLNKLNQLHQRNSTSQLSNHRGNANDDDDDDDDDDDKHVVSANENSDIQTRLRPQDIKLEIEENETVALLQRQVLGTCLVARQTNNNNNNNSSSNNNNNSQIQQTQRGRSIKEEEREFEENENGEREDIEDIATEGQKRLKITEESSHHTGGQITTRLSASPLRENETRRTSIRERETNDLVDTIGTKTEERIDLPTSGLLRVKKEEELQEVPRTLSCGVDASTIVRLSNIADASNSEICKISEIAGGDTSLPYLVNRRTSPPPEDWKPLDKCFFCLDGKLPHDEQPPLSPQSESSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPRESPLVAVQSHQDGSSGLDQPLDLSAKPKNSQDNNIVTMSKQQKIPLRMPAGLDPKSIFTSSYRGKPRMTGPVGVGGVAVVGAGGSRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDATLNSTHSHPHESGLQASTTTMTTTTSTSISTSTTTTTTTTATTTTTTARTTSTTTPNTIQNASATTPPPQVDEFNTWPLDVREVARLEADDKDLSGAEEEKEVEKALLRPLLSLEDLVRFSALEGSGSDSLRTLLQRGQETGTEWPGFEHANIGPYIQKMLAAAAPFKGLETPDYRIPEVMRRLMSEDKRLNRDVNGDNLQQHHHHHHHMQHSHHHHHHQQAQQAQQAQQKLREKSQHQQHRGAITNDDFNPSIEEEASDSGQGRAILKIPSYKPASSSTQGSSKNNGEPTSAAFAQSFAQSGGGGGGGGGGISAAGSPNLIERASPAYSGTSSPTNSLVGKSAASGGVNFRDVIAKSISVKFQEGQSVIGSSSGQGGGIVQSSASMMTDGVINPFKRGRYTPPQTQQQQQQQQSHQQKQQSHDKSKQNSGGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKESAGGGGSMRSSLTDKKPSQLKPQKPFASSSSSPGGGGGGGGGGGIPGGPNGLKMPQFLDGMTPLPFPHPFNFWGPTAFMPAPFMTGGPSVPSIMPEQYFATQRMRGLQEQQRSAIVQQAQRERDGGNGPEAGTSNSRGSSMVKSTREIAESLYDGTGANGSFLDNLIRSSLETGIPRDQRAMAEARNNQQQQLQLQQQQMQRERDQRDHLPEAMSSKALIDQLCRNSRRTPLPRMTHDSSEDESYRNPTNLRTSIPERPERVPTVDLSQSPTERTTRTLDDQSNDRLTSPPTPLSITRTGSRDDDTRDSIRIDRGSREREIHNGGQQQQQQQQQQQLQDDREHRKTIGSMQTQQINHYSDMNNLYVLSSEKKSACDNKLIVDHSSQKTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKEFSAVGGLVVQLQRGYNTGPSRTTNDQMSQNNNSQSNPTVQQNIGSQEQRGSTLLTMDDSVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-