Basic Information

Gene Symbol
ct
Assembly
GCA_963669185.1
Location
OY769907.1:4298202-4321082[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5e-27 5.6e-24 84.0 0.0 2 72 511 582 510 587 0.95
2 3 2.6e-32 1e-28 99.3 0.0 2 77 920 996 919 998 0.96
3 3 1.6e-30 6e-27 93.6 0.0 3 76 1173 1247 1171 1250 0.95

Sequence Information

Coding Sequence
ATGATCAGCCAATTGGTCGATGAGGTCTCCAGGTTACGGCAAAGCTTGCAGCGTCTTCAAGAAACGAGCTCGCAGGAGACTTCGCGCCTTGAGGAGGAGCTCGAGGCACGACGACAGCACATCAGCCGTTTGGAGAGCAAACTCGAGCGTCAGCGTGACTACGATGATATCAAGCGTGAGATAAGCGTTTTGAGATCCGTCGATTTGTCACAAATACCGACCGGTGAGCCCGGCAAGAGCCTCGAACATCTCCTAATGGAACGGTCGAAGGCTCTACAGCAAGCCGAGACACTTAAACCACCTAGCACTCCCGATGCACTTGGTGGACTAGCCTCACCCCTTCAGCGCGCCGCGACCGCTTCACCCCAGCATGCTGTTGGTGGTGTAGGTGGTGCTGCTGGTGTCGTTACTGGTGGGAGTGCTGCGCCGCCACCCGTCTCCCTCGTCTCCTGTTCACAACAACCGATCCCGACTCGCTCGACCCCGACACCCTCGTCGGCTACCTCGAATGCCTCGAGTCTCCTATTCCCGCCACCTCTCCAAAACGTCGAGACCTTTGGCTCTTTCCTCGGCGAGGAGATTGTCGCCAACTGGAGGCGGTCCCTGGAGAGATCGATCATGAGccagcagcatcagcagcagcagcagcagcaacagcagcaacagcagcagcagcaacaacagcaacagcaccAAGCCCAACAGCTACATCCCTCGCAACAATTGCACCAACAGCAACAAGCATTATTACCATCACAATCACAAACCCAAGCTCTCTCCCATCTCCAGCAGTCACAGCCTgttgctgctactgctgcttcCTTTCACCAAGCAttgcagcagcaacaacaacaacaacaacaacaatcaaTGCACTCGTTGCATCCACCAACGACAACGAACCTAAATCACCTTCCATCGCCAACAGATAATCCATCGTCATCGGCCTCGTTAACAAACACACCGGCAAAATCCATCACACCGCAATTGGGTGGCAGCGGTATAATGGGAGTCGGATGCCTGGAAGCGACGGAAAAAGCACCAACGCCGATACCGGGACACGAAACACCAGCACCACCGACACCATCATCAACCGTTGCTCTAACATCACCCTCAGCCCCGATGATCGTCAGTGCACTTCAACCCCCTCAATCGGCAACGACAACGACCAACACCATTCTCGAATCTCTGCAGACGGGTAACAGCAGCAACATGAATGGCTCCAGTATAGGAATGTTGCCAGGTGTTGTGCCCGCGTCACTTCCACCAAAGAGTCCGCAGGAGGAATCTTGccataacaacaacaacaacagccaTCATCTGGCAAACAACAATATCGGGGGTCTCAGTGTACTCGATACCCTAAAGAGTCCTTTTCGCTTTGACGACAGAACGCATCCGTTCAGATTTGGCGATGAATTTGGCGCTGCCGGTATGGCCGGTAGACTCGGTGAGTCACTCATTCCAAAAGGCGACCCAATGGAGGCGAGACTTCAAGAGATGTTGCGCTACAACATGGATAAATACGCCTCGCAAAATCTGGACACCCTTCACATAGCGAGAAGAGTCAGGGAATTACTGTCGATACACAATATTGGACAGAGGCTCTTCGCTAAATACGTACTGGGACTTAGCCAGGGTACCGTTAGTGAACTTCTGAGCAAACCCAAGCCGTGGGACAAACTTACGGAGAAGGGACGTGACAGCTACAGAAAGATGCACGGATGGGCTTGCGACGAAAACGCCGTGATGCTACTCAAATCACTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATACCGACATTTGGACGTGGTCCACAGGACGGTGGTCCGCCTGATATGAGCGACGAGAGACTGGCTCACATACTCTCAGAATCGGGACATCTGCAGATGAGCCGGGGCGAGCACGACACGTCGAACGACGCCGACAGCAAAAGCCCAAGCAGACTCGGCTGTCCGAGTCCATTTGGCAAGGATAGAATGGACAGTCAGAACAGAAGACTGAAAAAGTACGAGAACGACGACATTCCCCAGGAAAAAGTTGTGCGAATTTATCATGAAGAATTGGCCAAATTAATGGGCAGACGAGTCGATGATCTTCGGGGCCCTCGTGATTTTCCACCGAGCGCGATGTTTCCTCACTTTTTCAGCGGTGCCCAGGGTCTCCAGGGTATGGAACGTACGCAGGAGGAGATACGATTGGCACTTGACGCTTATCATCGTGAATTACAAAAGCTCAACGTGACACCCGGACAAAATGCTGCATTGGCAGGTCTGCCCGGTTTACCGAGCATACCGGGTTTATTAGCGCTACAGCAGCAAGCACTTCAACAACATCACATGGCAGCTAATGGTGGTGGAGTTCAAGATCTCAGTTTGGGAAAAATTGATCCGCGCAATAAAATGATGAACGGGGTGACGGACGAGGATAAGGACAAAATGGAGGAAGCTATGAGACACGCTGGTAGTGCATTCTCACTGGTGAGACCAAAGCAAGAACCAAGTGGGCCTCAATCGACACCAGGTGGCTCAAGTGCGAGTTCGCCATTGGGTAATTCCATACTACCACCGGCAATGACGCCGAACGAAGAATTTTCGGGTGCTGCAGCGGCGAGTCCATTACAAAGAATGGCATCGATAACAAACAGTCTGATAAGCCAACCGTCGACACCGACGCATCATTCGGCAAATCAGCGTCCCCTCAAAGCCGTTTTACCCCCAATAACCCAACAACAATTCGATATGTACAACAATCTAAATACCGAAGACATCGTGAAAAGGGTGAAGGAACAATTGTCTCAGTACTCGATCTCTCAGCGTCTCTTTGGCGAATCCGTGTTGGGTCTTTCTCAAGGCTCAGTCTCGGATCTTCTGGCACGACCGAAACCCTGGCACATGCTGACGCAAAAGGGTCGGGAACCTTTCATCAGAATGAAAATGTTCCTCGAGGATGACAATGCTGTCCACAAATTGGTCGCTAGCCAGTACAAAATAGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACCCCAATGAAGCCAATGCCACCGACAAAATTGGTCCAGGAGCAATTACAAAATGCCGCAAAAGCACAAGCAGCGGCACAGGTAGCGGCccaagcagcagcagcggcggCAGCGGTGGCGCAGCATCAGCAGGAAAGTCAGATGCAGCTCGGTCCACCACAGCAAAATCCGCAGCATCCGTCACATCCACAGCCACCGCCTCCCTTGATGCTAACGCCACCTGGACCTCATCATCCTCATGCGCAACTGAGCATACAAGAGTTGCAGAAgaaacaacagcaacagcaacaacaacagcaacaacaacagcaacagcaacaacaacagcagcagcaacaacagatGGGTCTCCACTCGCCCCATCATCAAATGGCACCATCACCACTTCGCAGTCTTCATCAGCACATCTCACCGAGTGTCTACGAGATGGCGGCACTCACGCAGGATCTCGACACGCAAACGATAACGACTAAGATCAAGGAAGCCCTTTTGGCCAACAATATTGGCCAAAAGATCTTTGGCGAGGCTGTTCTCGGTTTATCGCAGGGTTCGGTGAGTGAATTGCTCAGTAAACCGAAACCCTGGCACATGCTCAGTATCAAGGGACGTGAGCCATTCATAAGAATGCAATTATGGCTCTCGGACGCGCACAACATCGACAGACTGCAGTTACTGAAGAACGAGAGACGCGAGGCCAACAAGAGACGACGCAGCAGCGGCCCCGGACACGACAACAGTTCCGACACATCGAGCAATGATACAGCGGAATTTTATCACGCCTCGTCGCCTGGTCCAGGACCACCATCGGCCAAGAAACAGCGTGTACTCTTCTCCGAGGAACAGAAGGAAGCTCTCAGGCTCGCCTTCGCTCTTGATCCCTATCCAAATGTCGCTACCATCGAATTTCTCGCCAGTGAGCTCGCCCTCTCGTCCAGAACCATCACAAACTGGTTTCACAATCATCGCATGAGACTGAAGCAACAAACGCCTCATGGTCAGCCAGAACCCCAGTCACCACGTGAACCTGGACAACCCTTTGACCCTGTGCAATTCAGGCTCTTGCTGAATCAACGATTGCTCGAAATACACAAGGAACGTCTGGGTCTTGGCAATGTGCCGATTCCATACGCACCCTACTTTAATCCAAATATCGCGACATTGATGAACAATGCCCTCAAAGAGCAGTGCTCAGGTCTCGATCTTTCGATGGGCACGTTGAAACGAGAACCTAATCAGGAGTTTGAGGATGACGATAACGATGATGCCATGAGCAATCTTGGTAGTGAGGATTCCGAGGGTTCCGCGGGTAGTATGAAACGAGGGGATACGACAGATACGAGCCAACAGCCATCATCGGCACCCACGACCGCACGATCTAACAGAAGAAAACCAGCTGCCCCGCAATGGGTCAATCCCGAGTGGCAGGAACCACCAAGAACTGGCGACGAAGTTATCATAAATGGCGTTTGCGTCATGCAGACTGATGACTATGGCgtcaagagagaaaatgaggaaaCTGTGCGCGTCGAACCGACCCCAGTTCAGGACAGATACGAGGAGGACGCCGCGAGTGACGTGTCATCTGTATCGGCGAACAATGGACAGGATCGGGAGAGTCCATTGCCAAGCCTGAAATCGGCGCAAAATAGCCCGTCAACGTCACCAAGACCGCCATCGGCCTCACAACAACAAACGCcacaacaacaagaacaacaaaaTGACGAGGAAATTCCAGCAAAGGACATTGTGAAGAACGAGCCCGAAGAAACATGGGACTATTGA
Protein Sequence
MISQLVDEVSRLRQSLQRLQETSSQETSRLEEELEARRQHISRLESKLERQRDYDDIKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAETLKPPSTPDALGGLASPLQRAATASPQHAVGGVGGAAGVVTGGSAAPPPVSLVSCSQQPIPTRSTPTPSSATSNASSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQHQQQQQQQQQQQQQQQQQQQHQAQQLHPSQQLHQQQQALLPSQSQTQALSHLQQSQPVAATAASFHQALQQQQQQQQQQSMHSLHPPTTTNLNHLPSPTDNPSSSASLTNTPAKSITPQLGGSGIMGVGCLEATEKAPTPIPGHETPAPPTPSSTVALTSPSAPMIVSALQPPQSATTTTNTILESLQTGNSSNMNGSSIGMLPGVVPASLPPKSPQEESCHNNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGIPTFGRGPQDGGPPDMSDERLAHILSESGHLQMSRGEHDTSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKVVRIYHEELAKLMGRRVDDLRGPRDFPPSAMFPHFFSGAQGLQGMERTQEEIRLALDAYHRELQKLNVTPGQNAALAGLPGLPSIPGLLALQQQALQQHHMAANGGGVQDLSLGKIDPRNKMMNGVTDEDKDKMEEAMRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPNEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQVAAQAAAAAAAVAQHQQESQMQLGPPQQNPQHPSHPQPPPPLMLTPPGPHHPHAQLSIQELQKKQQQQQQQQQQQQQQQQQQQQQQQMGLHSPHHQMAPSPLRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQLLKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIHKERLGLGNVPIPYAPYFNPNIATLMNNALKEQCSGLDLSMGTLKREPNQEFEDDDNDDAMSNLGSEDSEGSAGSMKRGDTTDTSQQPSSAPTTARSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRYEEDAASDVSSVSANNGQDRESPLPSLKSAQNSPSTSPRPPSASQQQTPQQQEQQNDEEIPAKDIVKNEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00628992;
80% Identity
iTF_00628992;