Basic Information

Gene Symbol
kn
Assembly
GCA_963669185.1
Location
OY769905.1:15795109-15806227[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.8e-111 6.4e-107 358.3 9.8 205 530 1 312 1 318 0.84
2 2 0.21 2e+03 -3.2 11.0 441 500 273 330 268 368 0.53

Sequence Information

Coding Sequence
ATGAGACGATTTCAGGTGATAATATCGACGCAGGTCTGCGTCGAAGGGCCTCATCTCGCGATCTCGGACAACATGTTCGTTCACAACAACAGTAAACACGGTCGAAGAGCAAAGCGACTGGACCCGAGTGATCACGGCGAGTACAACAGTCTTTATCCAGCACTACCTCTCCAAACACCTTGTATAAAAGCGATATCACCGAGCGAGGGTTGGACGTCCGGTGGCTCGACCGTAATTATCATCGGCGAACACTTCTTCGATGGGCTACAAGTAGTTTTCGGAACGCACCTTGTGTGGGGTGAGttaataacggaTCACGCCATCAGAGTTCAAACACCACGTCGACAGATACCAGGGGTTGTCGAGATTACGTTATCTTACAAGAACAAACAATTTTGCAAAGGTTCACCTGGAAGATTCGTCTATGTCTCCTTGAACGAGCCAACGATTGATTATGGCTTCCAGAGGTTACAAAAACTTGTTCCCCGGCATCCGGGTGATCCGGATAAATTACCAAAGgaaataatactaaaaagaGCTGCTGATCTTGCAGAGGTATTGTACAGTATGCCGAGAAGCGGTAACACGTCAATTTCAGGAGCTCCGGGTAGTCCTGGCTCGGGTCATCCAACGGCACCACCGACGTCGAGTTCGACGACGGCATTCGATTCGTACACCGGTCAGCTTGCGGTGACCGTGCAGGAGAACGGTAGCGCGGCCAAGTGGACCGACGACGGGAGTTCCGTGACAACGGGCGGAGGTGGTGGAGGCAGTGGCGGAGGAAATGGCGGTGGCGGTGGAAGTGGCGGTAACGGTAGCGTTGGTGGTAACAATGACGTCTACAGGCAAAGCAGTAGCGCGAGTCCACGTGGTGTCGTAACCAATGGTGGTTATTGCGGAAGTTCGGCAAGCACGCCTCACAGTCACAGCACGAGCGGAAGTTACTCGACAGCAAATCCCTACACAGGAAGCCCGACACTTTACACATCACGGCTAGGAGACGTCGTCAGCAGCAGCACGCCGTTCAACATGAACCCGTTTATGTTGCCAGCATGCAGTCAGGGCTATACAGCCGTTTCAAGCCCTCTACTGTCGTTTACCGGTAAATAA
Protein Sequence
MRRFQVIISTQVCVEGPHLAISDNMFVHNNSKHGRRAKRLDPSDHGEYNSLYPALPLQTPCIKAISPSEGWTSGGSTVIIIGEHFFDGLQVVFGTHLVWGELITDHAIRVQTPRRQIPGVVEITLSYKNKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLVPRHPGDPDKLPKEIILKRAADLAEVLYSMPRSGNTSISGAPGSPGSGHPTAPPTSSSTTAFDSYTGQLAVTVQENGSAAKWTDDGSSVTTGGGGGGSGGGNGGGGGSGGNGSVGGNNDVYRQSSSASPRGVVTNGGYCGSSASTPHSHSTSGSYSTANPYTGSPTLYTSRLGDVVSSSTPFNMNPFMLPACSQGYTAVSSPLLSFTGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2