Dtri000998.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- -
- Assembly
- GCA_949715965.1
- Location
- OX454319.1:9134182-9153123[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0019 0.36 12.7 0.6 2 23 1098 1120 1097 1120 0.96 2 10 0.29 55 5.8 1.8 6 23 1129 1146 1129 1146 0.99 3 10 0.00034 0.065 15.0 1.8 1 23 1152 1175 1152 1175 0.96 4 10 0.0022 0.42 12.5 3.9 1 23 1183 1205 1183 1205 0.97 5 10 3.6e-07 6.9e-05 24.4 0.2 1 23 1213 1236 1213 1236 0.97 6 10 0.23 44 6.1 0.5 2 23 1243 1264 1242 1264 0.95 7 10 0.023 4.5 9.3 1.1 2 23 1273 1294 1272 1294 0.96 8 10 0.0074 1.4 10.8 0.0 2 23 1308 1330 1308 1330 0.95 9 10 0.0016 0.3 13.0 2.7 1 23 1336 1358 1336 1358 0.98 10 10 3.5e-05 0.0067 18.1 4.0 1 23 1364 1387 1364 1387 0.97
Sequence Information
- Coding Sequence
- ATGATTTGCCGAATGTGCTTGGTGCATTGCCAGGAGCATATCAGGATATTCGATTACGAGGGACTTCAGCTGAGCATCGCTGCGATCATTGCGAAGTATTTCTGGTTCGAGCCAAAGGCTGATGATTTGGTTTCGAATTGCATTTGTAAGCCGTGCTGGGCACAGATCAGCAATTTCCATTCCTACTATTCGCATGTTGAAGAGGCTCACAGGAAATTGTCAGAAACCTGCTTCGTCAAAGAGGAAGTCACATTTGACTATGAGAGTGAGGAAGGGAGGGCGGAAAATTTGCAAGATATGGATACATTACCTTCCACCTCCAATATTTGGTATGATGAGTTAATTGATGAGAAAGGAACATCTTCATCGTCTTCAACACCGAAAACAGTTGCTGATGTAAAGGTGAATGATGGTCCGGCAACTCGTGGTAGACCAAGTGGAAAACGTCTTTTCGAGGAGCCTTTTTTTACCGAGGTGCCTACTCGAGACGAACCAGGCCAACACAATAGTATGAGAACAATCAGTGCAAGGtgtttaatttgcaaaaataaaattattaaaggcCAAAGGAATGTTtcatcaaattttattaaacatttaaaagttATGCATCCAGACATGTATGAGTTGTACCGAAGCAATAAGATAATTAGAAATGAAAATTGCAATTCATCTTTTGAACCATATCAAGATAATAAGAATTCGAAACGAGAAAAATATAATGAACCTTATGAACCCCAAACCAAACCTGAGAATTATGTCACacctttaacaaaattaaatgataatatTATTGCTTTTGTTGCTGATGCAATGTTACCTTTATCGATAGTTGAAAATCctcattttatcaaaattttcgaaCAGTTTGGAGTTCAAATTATGGGGCGTGAAACGTTTAATGAACgactaaataataattataatatattaatgaGCAGAATTAAGGATGCAATATCTAAAAATAAGTACTTTTGCACTACTGCAGATGTTTGGACTTATAATAAGAGCAGCTTTTTCGGTTATACATGTCATTGGATTGATGAAGATTTCAATCGATTCTCTGCTGCATTAGCTTGTAAAAGATATACAGGCCAATATTCTGTTGATAGGATAAAGGAGCTAATTTTTGAAACTAATGAAGAATATGGTCTAAGCTTCCAAAATATAGTTACAACCATGACTGATAATGGGTTAAACTTAACACAGGCGTATATGCTACATGGAGTAGGTACAGTGCCAGTAGAGGCTGAAAATGGTTTAATCAATATGTCCGCCGATGATATTGTTATAccggaatttttaaaatttgacgaaTACCAAGGTTTAACAGGCTTCTTTCCTAATCACTGTCGAAGTGCTAGCCAAGCTTTAGATTTAATTCCCACCGTGGATTTTATGAAGGATTTAGAAAGTAATGCTCCACTTTACAAAAAGCATTTACAGagTTTTATGAAGTGCCTACAACTATGGGACAAAGCCGCTAGTAGTTCAAagttaaatgaattaataactGCCACACTTGGAACATCTCCGAGTTATCCCTTAATTATTCGATGGAATTCTATATTTGATCGAGTTAATATAATTTTGCGACATAAAGAAAAATTGCCGGAATTGTTTGACAAATTAAAACTTGTCAATTTTTCTCAAAGCGAATTGGAATATTTAGAAGAGTATTGCCTTGTCATGTGGCCTATATCGGAATGCATTAATTTTTTGCAAGGAGATAAAGCTAAATTTTACGGCTATCTAATACCATCTTTGGTAACATTAAAAGTGAAACTTGATAAAATCGCCTCGAatggaaatttgaaatttttaaataacgaaTTAATTGCCTTGAGATCGCATTTACTTCGAAGATTTGAGCATGTTTTTGAGTTGAAGGAAGAAGCATATGATGCTGTAGTTGCATCTGTAACTTGTCCATCTATTAAGTATAGATGGATAAATGTTATTGGTAAAACGTCAAACAAGAGTTTTGATGACgtaaaaaatatagtattgCAATATGCAAATAAAATTTGCGGAATAACCCAAACAAATATTGTCGAGCAGAAAATGGAAGAACAAGACgtatcatattttgattttgggGATGAAGATTCTGCAACAGAGAATTCCAATAATATCAATCTCAGCACCGTTGAATGGGAGCTTCTTTCATATACGACCGATAAAGACTGCGATTTCgaagtattgaaaaaatatccaaatcttatgAAACTCTTCATAAAGTATAATACTCTACTGCCTTCATCGACACCTgtagaaaaacttttttcattttgtgaAATTATCAATGCACCACATAAAAATTTCTTATCggatgaaatttttgagaaattagCCCTATTCAAAGCAAATATGAAATTTCCTACGTTAAGTATCAACGGGAAAATGTGGTGTCATAAGGATTTAGGAAGTAATGATCAGTCGATGAAGATTACAGGAGAAGCTTCAGAGTCTCTAGCAAAAGGGATATATCGTACACCCAAGGCCCAAAGTCACTATTTGAGAAAGACGAGCGAAATTCAGGGGCAGAAAATTTCTCGGAATCGGTGTCGTCGTTGTTACGAACAATTAGTAAAAGAAAAGGGTACTGCGGTAGCAAAAAGTCAAACAAGACGAGTGTCAACATTTTGTGAAACATGCCCAGACAGACCGTTTTTATGCGTAGATTGCTTTAAACCTTACCATGAAAAAACACCCACCCCCGatgAAAATTGTCAGGATGTCAATGTGGGGACTATAATCCAATTCAGCAATGGAGCAAAATGGTGTAGTATTGAGTCGCAACCATTCCGAGAAAGTGAAGTACTAGAACAACCAGCTGAAACTAAGAAAAGGAGACCAGGTCGACCGCGTAAAAGAGGTGCAAGGCcaacaaaaatatgtttagaaTCCAAATCCATTAAAAACGGGAAGAGAGGAAGACCACGCAAAGGAACACAAAAAGGAAAATCTCCAGGAAGACCAAGAAAAATTCGGCCCATGGTTGAAATACCAATACCAGAAAATCCCAACAACCCTCGTAGAGGCCGAGGTAGgccacgaaaagatgagaattTGGATAAAACGAATAATGTAGATGCGCCAGTTgttcaaaaagaaattattcgACCTGAACGATTGCGTAGAAAAATTCAGATTGTTGACTATTGTGAAAACCGGAAAAAATGTGCGCAAATTGAGAAaccaaaaaaagataaaaacgaATCTGGTCCATCTGAATATGTGAGCAAATCAAAAGAAGCCGATGAACATATTGCAAAACATATGAAACTAAAGTGTAGTAAATGCGGTGTGGAATTTGGTACTTTTGCAAAACTTATATCCCACTATCGCCGTTCCCATAGAACCAGAGGATTCGTTATATGCTgtcataaaaaattttacaaacggATACTTCTGTTGGAACATATTAATAGGCATTTGAATCCTGACTATTTCAGGTGTGATCTGTGTGGTAAAAGGCTTGCAGACAGACAGTGCTTAAAGAGTCACATGATGCTGATGCATGACCCAGATGAGCTGAAAGTACATAAATGTGATAAGTGTCCTCGAAGGTATTCCAAATTTTACATGCTGGAGCGACACAAATTAATACACGTTCCTATAGAAGAGAGGGAATACATTTGTGATGACTGCGGTAAAGCTTTCCCATCCAAAAATTACTTGACTTCCCACATAAGGTCAGTGCATGAGAACGCATATGGTGTAATGTGTCACATATGCGCAAAGATCATTCAAGGGAAAACTTTGCTTCAGAAGCATCAGTTGGAGCATGCTGGAATCGTGGAGCCTAAATTGCAATGCAGGGAATGCGGCTCGTGGCTTAAAAATAAGTATAGCTTGAAGAAACACATGGACAGACACGTCGAACGAAATAAGGAAATAGAAAATCCACAAGAAAATGTATGCGTTACCTGCGGAAAGATAGCTCCAACTAAGGCAGCATTACGTAGCCATATAAAGTACGTGCATTTGTCAAGCAGAATTCATGAATGCACTATATGtatgaaatcatttaaaaaagctCTCACCCTTAAGGAACATATGACCACACATACGGGAGAGATCCTCTATACTTGTCCTTATTGTCCAAAAACATTTAATTCTAGCGCTAATATGCACTCccataagaagaagaaacacaGAGCAGAGTGGGAAGAAAATAGAAGGAAGAAGGAATTCGAAAAGGAACGTTTTAAAAATAGTCAAGATGAAACCAGTGGTGACTTACCAATTCAGCTACCAGTGGAAGTTGTTTACAACGATACGGAATCAAATACAGATGTTATGTGTATAGAAAATTATTGA
- Protein Sequence
- MICRMCLVHCQEHIRIFDYEGLQLSIAAIIAKYFWFEPKADDLVSNCICKPCWAQISNFHSYYSHVEEAHRKLSETCFVKEEVTFDYESEEGRAENLQDMDTLPSTSNIWYDELIDEKGTSSSSSTPKTVADVKVNDGPATRGRPSGKRLFEEPFFTEVPTRDEPGQHNSMRTISARCLICKNKIIKGQRNVSSNFIKHLKVMHPDMYELYRSNKIIRNENCNSSFEPYQDNKNSKREKYNEPYEPQTKPENYVTPLTKLNDNIIAFVADAMLPLSIVENPHFIKIFEQFGVQIMGRETFNERLNNNYNILMSRIKDAISKNKYFCTTADVWTYNKSSFFGYTCHWIDEDFNRFSAALACKRYTGQYSVDRIKELIFETNEEYGLSFQNIVTTMTDNGLNLTQAYMLHGVGTVPVEAENGLINMSADDIVIPEFLKFDEYQGLTGFFPNHCRSASQALDLIPTVDFMKDLESNAPLYKKHLQSFMKCLQLWDKAASSSKLNELITATLGTSPSYPLIIRWNSIFDRVNIILRHKEKLPELFDKLKLVNFSQSELEYLEEYCLVMWPISECINFLQGDKAKFYGYLIPSLVTLKVKLDKIASNGNLKFLNNELIALRSHLLRRFEHVFELKEEAYDAVVASVTCPSIKYRWINVIGKTSNKSFDDVKNIVLQYANKICGITQTNIVEQKMEEQDVSYFDFGDEDSATENSNNINLSTVEWELLSYTTDKDCDFEVLKKYPNLMKLFIKYNTLLPSSTPVEKLFSFCEIINAPHKNFLSDEIFEKLALFKANMKFPTLSINGKMWCHKDLGSNDQSMKITGEASESLAKGIYRTPKAQSHYLRKTSEIQGQKISRNRCRRCYEQLVKEKGTAVAKSQTRRVSTFCETCPDRPFLCVDCFKPYHEKTPTPDENCQDVNVGTIIQFSNGAKWCSIESQPFRESEVLEQPAETKKRRPGRPRKRGARPTKICLESKSIKNGKRGRPRKGTQKGKSPGRPRKIRPMVEIPIPENPNNPRRGRGRPRKDENLDKTNNVDAPVVQKEIIRPERLRRKIQIVDYCENRKKCAQIEKPKKDKNESGPSEYVSKSKEADEHIAKHMKLKCSKCGVEFGTFAKLISHYRRSHRTRGFVICCHKKFYKRILLLEHINRHLNPDYFRCDLCGKRLADRQCLKSHMMLMHDPDELKVHKCDKCPRRYSKFYMLERHKLIHVPIEEREYICDDCGKAFPSKNYLTSHIRSVHENAYGVMCHICAKIIQGKTLLQKHQLEHAGIVEPKLQCRECGSWLKNKYSLKKHMDRHVERNKEIENPQENVCVTCGKIAPTKAALRSHIKYVHLSSRIHECTICMKSFKKALTLKEHMTTHTGEILYTCPYCPKTFNSSANMHSHKKKKHRAEWEENRRKKEFEKERFKNSQDETSGDLPIQLPVEVVYNDTESNTDVMCIENY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -