Basic Information

Insect: Dysmachus trigonus
Gene Symbol: -
Assembly: GCA_949715965.1
Location: OX454323.1:28879046-28881189[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00015 0.029 16.1 1.0 2 23 190 212 189 212 0.95

2 7 1.2e-05 0.0023 19.6 0.3 1 23 217 239 217 239 0.96

3 7 2.3e-06 0.00045 21.9 2.8 1 23 245 267 245 267 0.98

4 7 6e-06 0.0012 20.6 0.7 2 23 274 295 273 295 0.98

5 7 0.00046 0.088 14.6 4.9 1 23 301 323 301 323 0.97

6 7 3.2e-05 0.0062 18.3 0.4 2 23 329 351 328 351 0.95

7 7 0.00021 0.04 15.7 11.4 1 23 357 379 357 379 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00015	0.029	16.1	1.0	2	23	190	212	189	212	0.95
2	7	1.2e-05	0.0023	19.6	0.3	1	23	217	239	217	239	0.96
3	7	2.3e-06	0.00045	21.9	2.8	1	23	245	267	245	267	0.98
4	7	6e-06	0.0012	20.6	0.7	2	23	274	295	273	295	0.98
5	7	0.00046	0.088	14.6	4.9	1	23	301	323	301	323	0.97
6	7	3.2e-05	0.0062	18.3	0.4	2	23	329	351	328	351	0.95
7	7	0.00021	0.04	15.7	11.4	1	23	357	379	357	379	0.97

Sequence Information

Coding Sequence: ATGACCGAATTCGTCTCTAGCTGCAGGATTTGTTTAGCAAAAAAGACGGGGGATGACTTCGAAAGAATCTTTGTGGCGAACGGTGTCAAAAATGAGCTTACTGAATTAGGGAGGATTTATCAGGATGTGTTGCACCTCGTCGTCTTTCAAGATGAGTCCCCGCAGTTTCTATGCAATTACTGTACATTACAATTAAGGCTCTTTCACAAATTCAGAAATAAAGCCTTGGAGTCTTATAATGCTTTCATAAATACACTTTGCAAAATTGAAAAGGTTTCTGAAGACGAAAATGAGGATATATATGAATGTGGGGAAATTAAAAACGAAGAAATATTATTCGAGGTCTGTACAGAAGAAGAATTTGAAGAAGTCCAGTACTTGGAGGAGGAGATGAACGAACAAGCAGATTTTGTTAATTACAACGATAATTTAAACAACGATGATAGTTTTCATAGTTACGATGATTCTAATGAGTACACGgtggaaaataaattaagaaaaaagagGAAAAGGAGAACTAAAGAAGATTTGGATGAAGATGCTGCTGAAAATGACGATAGTATCATTCAATGTAGGGACTGTAGTGAGACGTTTCACTCGAAGTACGCTTTAGAAGTGCACAGaAGAGACGTCCATCCCAGAACACGATATCTATGTAAATTATGCCCAAAGACATTTTTCTCTGAAGAAACTCTTCAAGTTCACATAAACGTACACAACGGTTTGCCGGCCTATAAATGCGATGAGTGCGAAAAGACCTTCAAACAGAAGGCTCACTACGTTTACCACATGATGGGTCACAGGAACGAAAGAAACGTTCAATGTCATCTCTGCGGAAAGGGATTTTTGAACAACTCTGATCTGAGAATTCATTTAAGGGTGCACAACGACGAAAGGCGTTATGAATGTGATGTTTGTGGAAAGCGATTTCGTGCCCATACACATATGACAAATCACAGGTATTCTCACTTTGAAAAACAGCTTCAGTGTGAAATATGCAAGCAAAAATACAGTTCGCCAAATACTCTTAAAACTCATATAAAAGCTGTGCATAAAAATGAATGTCCTCATGAATGTGAAACATgtcatagaaaatttaaaaggaaGCATCACTTAAAGGCACATTACAAGATACACCTAAAAACGagagtatttataaaaaatgaaattttatag
Protein Sequence: MTEFVSSCRICLAKKTGDDFERIFVANGVKNELTELGRIYQDVLHLVVFQDESPQFLCNYCTLQLRLFHKFRNKALESYNAFINTLCKIEKVSEDENEDIYECGEIKNEEILFEVCTEEEFEEVQYLEEEMNEQADFVNYNDNLNNDDSFHSYDDSNEYTVENKLRKKRKRRTKEDLDEDAAENDDSIIQCRDCSETFHSKYALEVHRRDVHPRTRYLCKLCPKTFFSEETLQVHINVHNGLPAYKCDECEKTFKQKAHYVYHMMGHRNERNVQCHLCGKGFLNNSDLRIHLRVHNDERRYECDVCGKRFRAHTHMTNHRYSHFEKQLQCEICKQKYSSPNTLKTHIKAVHKNECPHECETCHRKFKRKHHLKAHYKIHLKTRVFIKNEIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01049907; iTF_01256612;
90% Identity: -
80% Identity: -