Dtri001598.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- RTase
- Assembly
- GCA_949715965.1
- Location
- OX454319.1:17771448-17778853[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0029 0.56 12.1 0.8 2 23 1469 1491 1468 1491 0.95 2 13 0.19 37 6.4 3.8 1 23 1497 1519 1497 1519 0.95 3 13 0.00069 0.13 14.1 1.9 1 23 1525 1547 1525 1547 0.98 4 13 2.5e-05 0.0048 18.6 2.5 1 23 1555 1577 1555 1577 0.96 5 13 3.7e-05 0.0071 18.1 2.7 1 23 1584 1606 1584 1606 0.98 6 13 1.6e-05 0.0032 19.2 4.2 1 23 1612 1634 1612 1634 0.98 7 13 4.2e-05 0.008 17.9 1.3 2 23 1643 1664 1642 1664 0.98 8 13 1.8e-05 0.0035 19.0 0.4 1 23 1671 1693 1671 1693 0.98 9 13 1.2e-05 0.0023 19.6 2.1 1 23 1699 1721 1699 1721 0.97 10 13 0.00011 0.021 16.6 1.1 3 23 1729 1749 1728 1749 0.98 11 13 5.5e-06 0.0011 20.7 1.2 1 23 1757 1779 1757 1779 0.98 12 13 7e-05 0.014 17.2 0.7 1 20 1785 1804 1785 1805 0.95 13 13 0.0036 0.69 11.8 6.2 2 23 1815 1836 1814 1836 0.97
Sequence Information
- Coding Sequence
- atggaGAACTTGGCTCAAGAACGCGAGAAATGTAAAAGGCTTTCGACCTCGCAAAGCAGCACGTTGGCTAAATTCAATGGGACAACACATGGCAGCAATATCATTGGAGAGGCTGTAGAGACGGATGCTCTAACGGACGCGAACTGTTCTAATCATAACGGTTCAAGTAATCAAACAAGCGTGAGGCACGCTGTGTATAAAGGCTCATCAGAAATACCCGTGAGAGCTATTCTCAAACGGGCAGAAATTATTGACTACCGCCGAACAAGCAGGGAATTGTCACAGGAGATGGCAAGACAAATGGAGCCGATGGACGATCAGCACGAGGAAGACCTGGAGGAGTTTGAAGAAGTCCCATTGACCCAATGGATTATAGCGAAGGGAGGTAAGGCTGCAAAGAGAGAAAATCTGAACACGGGAGCCCCATCAGAGGAAATCGATGACAGCAACAGGTTTACCATATTGGAAGCGGACGACGAACTGGATCTAAATGGCAAGTCGAAGTACATTAACCCTAGTATAGTTAGTTctagtaataaatttaataataaagcgGAACCCAAAAGTGATAAGAAACTAGCGGCACATTTTAACAGTTGTAATAACGGGGCAAAGGGCGAGGGACAAGAGGCAAGGACAATGCCTGCAAGAGTCCCACCAATCGTTGTTAGAAATTTAAAcgtaaaagtttttaatgaatttatggAGAATGTGAAAATAGAggcaaaaattgttaatttcggTTCGGGAGTAAGCAAAATTTATGCAAGAACTTTGGAAGAGCGCAGGCTACTGTTTAGAGCTTTGCAGAAGGAGAAAGTGGACTGTTTTACTTACTCAGCTAAAAACGAGAAACCTATCAGCCTTCTGCTGAAAGGTGTCGATATTTCCTATGACGAAAAGGATGTTGGTGAGGAGTTTGGTAGGCTTTTTTCGAAGGATATATTTCTGAAGATTAGAAGGTTTGATACGGAGAGGTCGAGAAAAGAGAACTATATCCTCGATTCCTTCTTAATTCAAATTAAGCCGGGGGCAGATTTGGAGACAATTCTCCATACGAAGAGATTCCTTAATCAAAGGATCACTTGGGAGAAAGTCAGGAGTAGAGGAACAGTCCAGTGCTACAGATGTCAGTCTTTCGGGCACTTGGCTGAGAACTGTGGTAGGATTCCAAGATGTCGAAGGTGCGCTTTGGTACATTCTAGCAGGGACTGTCCCCTTAAGGACAATATTGAGGCAACTAGGACTTGTGCAAATTGTAAACAGAAGGGTCACCCCTCTAATTACAGAGGGTGCCCTAGcttcataaaatataaagaaaaaaagaatgaaAGAAATAAGAAGGCACAAACAGAGAAATACGAGGCAAACTTAATAAAGAACCCAACAACTAAAATAAATCCTAGAGTGAGTTATAAGGACGCGGTCCTAAGTAATTTAAACATGTCAAAGAAGTTTGAAGAGGGCGGGTCTTTTGAGATTCGGCATGACTCTGGGCAGGGGACAAGAACGGCCCCCAAGGGGGGACTAGGCAATAGTAGAAGAGTTGAGCTGTACGACCTGATAAAAAACCATAATCCGGACTTTTTGGCGATCTCTGAAACCAGACTTAAGGAGAGGCACGTAGTTAATTTTCccaaatataaaacaataaggAATGACGAGGGACAGGGTGTAGCATTAATATTAAGAGATAATTTTTCTTACTCTAGACTTAATACCCCAAATTTTCCAGTTCCATTAATTCTAATAAGTGTTGAGTTTAAAACAGCACATAGagttaaaaaagtaataataggAAGTATTTACATCCCATCGAACACCCCGGGGCAAACTTTTAAATTGATTCTTGATAAATTAAACTCTCTGTCAGAAAAACATGATTCAATGATAGTGGGAGGTGATTGGAATGCTAGACACCCGGATTGGGGCGACATAACAACAAACAGTAACGGGAATAGGTTAAGGGACTGGATGCAGAATAACAGGGTGGGCGGTGAAATCAGAATAGTCTCTCCAAGAACCCCTACTTTTCCACAGGGAGCCTCCACAATTGACTTTTACCTTACCTCAGATGACTACTCCAAAGGCTTATTTAGGAATTTCTCATGTCACACGGTTGAGTCCTTTTCAGACCATTACGCGGTCAAGTTAAAAGTGAACATAGGGGATTGTGAAATCCCAATTAAACGTCCAACTACATGGGAAAATTTCGAGGAGACCGACTGGAGGGAATTTAGGGGAGCTTTGGATGAAAAAATAGACACCCTACCGCCGATTAaccaaaacatttcaaattccgAAATCGATATATGGATTGAGAGATTCAATACAATAATCAAGAGCACCATAGATAAGATCATCAAAAGACAACCCCTCAGTAATAGCAAATATAAAAACATCCCCAACTTTATCAAATCCCTTCTTAAAACTAAAAGACAGTGGTGCAAACaacttaaaaacatatttcacaACTCTTATAACAGAGATAGTCCTGAATACAAACGACTAGCTTCCAAAATCAACTGcctcaaaaaaatcattcaagATAAAATCACAATACATATGAACAAGAGCTTCCAAGAGAGGCTCTCTGCAATCAGGCCGGGCCCACAAgcctttaaagaaatttttaaaataacaggAAAAGCCAAGACTTCCTCTCCTGACTCGATAAAGGTTGGTCGGATTGAACTCAGTGGTGCTCAAGATAAGCTCTTAGCCTTCGAATGTTTTTATGAGGACCTCTATAAAGAGAAGTTCCCAGCACATATACCTGAACTCTTAACGGAAGTCAACAATAGCATTGACAATTTCATGAACAGAAACAGTAACCAATCAGGAACATTTACACAGTTGTCCAACTTCACACCTCAAAACAACGCTCTCACATCTCGAGAGAACCTTTTTATCAGTTCTGAAAGACTtcataaaataatcaaataccGGTTAAACGGAAAGAAATCCAGTGGCCCCGATGGTATCTCAaactttttgattaaaaaaatgtctccgAGGGCAGTAAAATATCTGACGATAATCTTTAACCACTGTTTAAATAACGGATATTTTCCTAAAGAATGGAAGAGAGCGAAACTCATCCCTATACAGAAAAATAACAAGTCTAACGATGTAGGTAACTTTAGGCCCATACAGCTATTGTCCAACATAGGTAAGCTCCTGGAACGTGTCATTTCAGATGAATTGGACTTTTTTGTCGACCAGGAAAAATTGATTCCAGACCATCAATTTGGTTTCCGAAGGGGCCACTCCACGAACCATGCGCTTTTAAAAATACACAACGATGTAACCAACGGTTTAAGATCCAAAAAATGCACAGTAACATGCGCCCTAGATATCGAAAAGGCATTTGACAGCGTGTGGACAAAGGGGCTTGTTTACAAGTTATTGGCATATTCCGTACCACCACCATTGGTCAAACTGTTTATAAGCTTTCTCTCGGATAGGAGCTTGGTAGTGTCGATGGATGGGGAACTTTCAAGACCCATAAAGGTCAGATCAGGCGTTCCGCAGGGTTCAATTACCGGCCCGAAACTTTACAATCTTTTTCTGCTCGACTTCCCCCATACCAAATGTAATAACGCAGGTGAACTGCTCTCAGAGTCAATTTTATATGCCGACGACACGTTAATCTACGCGCAAAACAAAGATCCATTACAGGCCCTAGATGAAATAACCTCTCACTTCAAGgaaattgaagaattttataaaacctgggggattaaaataaatttaaataagtgtGAGTTAATGTGCTTCCGGAACGCTTCCAAGAAGGGACCATCGGGTGTAGCCAGGAAAAGCAAGGATCTAAGTATGAACCTTAACAACTCAATAATACAAACAAAGAATAAACTGAAATACCTTGGAGTAAACCTAAATAACCTACTTAAACCAAGTGACCATGCTAAATATGCTCTAGACAGGGCATTTAAGGCCACAAGAATATTAATGCCGCTTTTGAGACACCCGAAGATGCTTAAGAGAACTAAACTCCTCATCTATAAACAATTAATACGACCAGTAATCACATATGGGTTTACAACCTGGTTCACAATTTCTCCTACACTTGCACAGCGACTTGAgattttcgaaagaaaaatcCTTAGACTATGCGTCGGCAAAAACTTCCAGTCAAGAAATAAACGGTTTTCAAATAACTACATTTATGAACTTGCCGGAATAACACCTATTACAAGAAAAAGTCATACAGTATTACTGCGTCGGAAAATTTCGGAGAAAACACTTCTCGAAGGATGTTGTCCGATGTGTTTTATGAAATACTACAAAAAGTATAAGGAAGCCTGCTTGGAAAATCTCCTGGGTAGTGGAAAAAGATTTAAGAAACGGAGGGATGACTCTAAAAAAGTGATGCGGTGCAAATATTGCCCGAAATGTGATATTCAGTTCCGTACTTCGAACATGTTCCTCAATCATGCGAAGTCAGTGCATAACGATGATAGACCATACTCATGCGGGAAATGTAATTTTGCATCGTGCCGATATCAAGATCTGAAGCGGCATAGTTACGTTCATGTCGACTATAAAATGTTTAGGTGCCATCTCTGCCCGAAGGAGTATACAACGAAAACCTCACTGGACGGACACTTGCTGAGCCACAACGGCGTGAAAATAAAGTCTCATGACTGCTCGTATTGTGGGAAGAAATTCCCTATTCCGCATTTACTGAAGCGACACATTAAAGTACACAATCCTACCTCAGAGACGTTTAAGTGTAGTTTATGCCCTAAGGAATTCGCTCATAAGCAGAGCTTAAAATTGCACATGCTTTATCACACCGGTGAAAAGCCCTACGAATGTCCTTATTGCCAGAAACGTTTCACCCAGCGGTTCAACTATCGCTATCACTTACAGAGGCATAATCATATCCTTGGGACCTTGATAAAATGCTCTTACTGCGACAAGCAATTCCTCACGAGATACCTCTTAAAAGCGCATATGCAGACCCACGAGAAGAATGAAAACGCTTTCGTTTGTGATATTTGCTCGAAACCCTTCACGCGGGAGGAGAGCCTCAACCTGCACAAGCTAACTCACCCCGGTAACAAGCCATTCACCTGCGAATATTGTGATAAGAAATTCAACCGCATCTCAAGTTTCAATCGACATCGGGCCATTCACATCGATGCCGAACAAGTCGACTGTGAGCACTGTGGGAAGAGTTTTCCTGGACTCTTTCGGCTCCAAAGAcatattaaaattcatactaGGCCTGTAGAGAAACCTTTCAAATGTTCCATATGTCCTAAGCGATACTCTAAGAAGCCAGATCTTAAAAATCACATCCTTAAGCACGAGGGCCGAGAGCCATATGATTGCCAGCACTGCGGAAGGAGGTTTATTAGGCAGAGATCTCTTAAAATTCACCTTGATCCGGACAAACAAGCAAAACACACTTTAAAATGCCGCGAATGCCCAAAGACTTTTCAAAATAAGAGCTGCTTTACGTATCACAAACGGTCTCATAAGGAGAATCATTTAAAGCGACATGCTGTTAAAGAGGAATCTAACGTTAAAGTGGAAATTAAACAAGAAATGTAG
- Protein Sequence
- MENLAQEREKCKRLSTSQSSTLAKFNGTTHGSNIIGEAVETDALTDANCSNHNGSSNQTSVRHAVYKGSSEIPVRAILKRAEIIDYRRTSRELSQEMARQMEPMDDQHEEDLEEFEEVPLTQWIIAKGGKAAKRENLNTGAPSEEIDDSNRFTILEADDELDLNGKSKYINPSIVSSSNKFNNKAEPKSDKKLAAHFNSCNNGAKGEGQEARTMPARVPPIVVRNLNVKVFNEFMENVKIEAKIVNFGSGVSKIYARTLEERRLLFRALQKEKVDCFTYSAKNEKPISLLLKGVDISYDEKDVGEEFGRLFSKDIFLKIRRFDTERSRKENYILDSFLIQIKPGADLETILHTKRFLNQRITWEKVRSRGTVQCYRCQSFGHLAENCGRIPRCRRCALVHSSRDCPLKDNIEATRTCANCKQKGHPSNYRGCPSFIKYKEKKNERNKKAQTEKYEANLIKNPTTKINPRVSYKDAVLSNLNMSKKFEEGGSFEIRHDSGQGTRTAPKGGLGNSRRVELYDLIKNHNPDFLAISETRLKERHVVNFPKYKTIRNDEGQGVALILRDNFSYSRLNTPNFPVPLILISVEFKTAHRVKKVIIGSIYIPSNTPGQTFKLILDKLNSLSEKHDSMIVGGDWNARHPDWGDITTNSNGNRLRDWMQNNRVGGEIRIVSPRTPTFPQGASTIDFYLTSDDYSKGLFRNFSCHTVESFSDHYAVKLKVNIGDCEIPIKRPTTWENFEETDWREFRGALDEKIDTLPPINQNISNSEIDIWIERFNTIIKSTIDKIIKRQPLSNSKYKNIPNFIKSLLKTKRQWCKQLKNIFHNSYNRDSPEYKRLASKINCLKKIIQDKITIHMNKSFQERLSAIRPGPQAFKEIFKITGKAKTSSPDSIKVGRIELSGAQDKLLAFECFYEDLYKEKFPAHIPELLTEVNNSIDNFMNRNSNQSGTFTQLSNFTPQNNALTSRENLFISSERLHKIIKYRLNGKKSSGPDGISNFLIKKMSPRAVKYLTIIFNHCLNNGYFPKEWKRAKLIPIQKNNKSNDVGNFRPIQLLSNIGKLLERVISDELDFFVDQEKLIPDHQFGFRRGHSTNHALLKIHNDVTNGLRSKKCTVTCALDIEKAFDSVWTKGLVYKLLAYSVPPPLVKLFISFLSDRSLVVSMDGELSRPIKVRSGVPQGSITGPKLYNLFLLDFPHTKCNNAGELLSESILYADDTLIYAQNKDPLQALDEITSHFKEIEEFYKTWGIKINLNKCELMCFRNASKKGPSGVARKSKDLSMNLNNSIIQTKNKLKYLGVNLNNLLKPSDHAKYALDRAFKATRILMPLLRHPKMLKRTKLLIYKQLIRPVITYGFTTWFTISPTLAQRLEIFERKILRLCVGKNFQSRNKRFSNNYIYELAGITPITRKSHTVLLRRKISEKTLLEGCCPMCFMKYYKKYKEACLENLLGSGKRFKKRRDDSKKVMRCKYCPKCDIQFRTSNMFLNHAKSVHNDDRPYSCGKCNFASCRYQDLKRHSYVHVDYKMFRCHLCPKEYTTKTSLDGHLLSHNGVKIKSHDCSYCGKKFPIPHLLKRHIKVHNPTSETFKCSLCPKEFAHKQSLKLHMLYHTGEKPYECPYCQKRFTQRFNYRYHLQRHNHILGTLIKCSYCDKQFLTRYLLKAHMQTHEKNENAFVCDICSKPFTREESLNLHKLTHPGNKPFTCEYCDKKFNRISSFNRHRAIHIDAEQVDCEHCGKSFPGLFRLQRHIKIHTRPVEKPFKCSICPKRYSKKPDLKNHILKHEGREPYDCQHCGRRFIRQRSLKIHLDPDKQAKHTLKCRECPKTFQNKSCFTYHKRSHKENHLKRHAVKEESNVKVEIKQEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -