Basic Information

Gene Symbol
zfy1
Assembly
GCA_949715965.1
Location
OX454320.1:4185478-4187866[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.97 1.9e+02 4.2 0.9 2 16 190 204 189 210 0.86
2 12 0.00067 0.13 14.1 5.4 2 23 241 263 240 263 0.95
3 12 0.024 4.6 9.2 0.4 1 20 321 340 321 342 0.94
4 12 1.3e-06 0.00025 22.7 2.9 1 23 350 372 350 372 0.98
5 12 1.3e-05 0.0024 19.5 0.6 1 23 375 398 375 398 0.91
6 12 8.2e-07 0.00016 23.3 0.9 2 23 405 426 404 426 0.98
7 12 2.3e-07 4.5e-05 25.0 1.0 1 23 432 454 432 454 0.95
8 12 2e-06 0.00039 22.1 1.6 1 23 460 482 460 482 0.99
9 12 1.5e-06 0.00029 22.5 0.4 1 23 488 510 488 510 0.98
10 12 0.0001 0.02 16.7 0.5 1 23 516 538 516 538 0.98
11 12 5.3e-06 0.001 20.7 3.1 1 23 544 566 544 566 0.99
12 12 2.9e-06 0.00055 21.6 0.4 1 23 572 594 572 594 0.98

Sequence Information

Coding Sequence
ATGTCCCTGGAATTCGATAAGATGTGCCGGACCTGCCTCTCCACCGGATCAGCGCTACTCTCGATTTTCGACAGCAAAATGCCGAATCAATTGTCCTCGATTGGGGCCCCATCGATCGCCGAGATGTTGAAGGCGATCACCTCGGTCGCTATAACCGACGAGGACGGCCTGCCTGGGAAGGTGTGTCTGGCGTGCATCAGCGAGATCAACCGCGCGTTCTCCTTCAAGATCAAGTGCGAGAACTCAGATTTCACTCTAAAGCAATATCTGATCCAGCAGATTAATCAGTTCGCGGAGAAGCAGAGCGAGGGTACGTTTAAAGTCGAGCTCGTGGAAAGTGGCCAACACCAGAAGGAGCTAATCGAACCAGTGCAGCTGGACGTGTCCCCGGAGGAGACGGAGAATCCCAAAGATTCTGGAGATGACGAAGAACAACTCTCGCTGATGCTAACCGACCATGAGGACTTTGTCGAGGAGTCTAATTGCGAGAACGAGACCGACGAGCAGGTCGTCTACATGATTGAACCCGTCCATGGCCAGGAGATCGACGAGAAAGAGTTCGTCCTCCAGTGTGCCGTCTGCAACGAGAAATTCGACAACAGCGAAGCCTTCAGCTGCCACAGCAAAGATTGCGCCGCCGGGGCTGATACAGCTCCTGAAAATGAAGACAAGCAATCCGGAGAGGAGAATACGAAAGACAAGAGAAAAAAGACTCCATTGAACTGCCCGCACTGCCCCATGGACTTTGTCCATCAGAAAAACCTCAGTAAACACATAACAAAGTGTCACGAGCGTGTCATTGATCTGGACGGTGAAACCGCTGAAAAGGATCCTGATGAATCTCCGGAGGAGTGTGAGGACTTCGCGAAAGTTGACCAAGAAATTGCTGAGGTGGTTAAAGACGTTATTGAGCAGGCAGAGGTTGTGAAGCACAAACCGACTGCCCTCCCAGAGAGCCCCTATCGATGCATGCAATGCGGAGCGGGCTTTGTTAAGGAGAAGTCCCTCAACTACCATTTTAAGCTGAACAAATGCACCGAGAAGCAATTCGAGTGCTCCGTCTGTCGGAGGGTCTTCATCACGAAAAGGAACTTGGTCCATCACATGAAGACCCACACGAATTTCAAGTGCGGAAAGTGCGGGGAGGTCTTCTCGCGGAAGGAGAAACTCAAGATGCACAACGACGTCGAGCACAAGGGTCTCATCAAGAACCAGTGCTCGCTCTGCGGGAAAGTGTTCACCATGCTCTCGACCTTAAAAGACCATCTGCGGACCCACAGCGGTGAGAAGCCCTTCCTCTGTTCGATCTGCGGCAAGGGCTTCAGCCAGAGCACCAATCTGAAGCAGCACCTAATGAGGCACTCGAAGATCAAACCGTACAAATGTGACCGGTGCGAGCACTCCTTCGTTAGCAAGGGAGAGCTGAACGCCCATATTCGGAAGCACACTGGCGACCATCCGTTCATCTGCACGACGTGTGGGGCAGGATTCACGACGTCCAGTTCACTGGTGAAGCACCGACGAATTCACACTGGTGAGCGACCTTACGCCTGCGAGTTTTGTCCCATGCGGTTTTCAGCGCTGGGAACGCTGAAAAATCACCGCAGAACGCATACGGGGGAGCGTCCCTACGTCTGCAAGTATTGCGACAGAGCCTTCGCCCAGAAAAGCGACTGCATGACTCACATGCGAACGCATACTGGAGAGCGACCTTACATGTGCACTGTCTGTGGATTATCGTTCTCGAAGTCTGGGGCCCTCAAGTCTCACCAGCAACTACATCGCGCAGAGGAAGTGAAAGATGAAGTCGCTGGAAATACTCCAACGATTCCGGAAAACAACAGGAGCGCCTCTATGGATGTGGATGTGTGCGTCCTCGGGGAGGTATATAATGTGCCCGAAGAACTCAAAGGAGACATCCTCCAGGAGCAGCACACCGTCTGCTAG
Protein Sequence
MSLEFDKMCRTCLSTGSALLSIFDSKMPNQLSSIGAPSIAEMLKAITSVAITDEDGLPGKVCLACISEINRAFSFKIKCENSDFTLKQYLIQQINQFAEKQSEGTFKVELVESGQHQKELIEPVQLDVSPEETENPKDSGDDEEQLSLMLTDHEDFVEESNCENETDEQVVYMIEPVHGQEIDEKEFVLQCAVCNEKFDNSEAFSCHSKDCAAGADTAPENEDKQSGEENTKDKRKKTPLNCPHCPMDFVHQKNLSKHITKCHERVIDLDGETAEKDPDESPEECEDFAKVDQEIAEVVKDVIEQAEVVKHKPTALPESPYRCMQCGAGFVKEKSLNYHFKLNKCTEKQFECSVCRRVFITKRNLVHHMKTHTNFKCGKCGEVFSRKEKLKMHNDVEHKGLIKNQCSLCGKVFTMLSTLKDHLRTHSGEKPFLCSICGKGFSQSTNLKQHLMRHSKIKPYKCDRCEHSFVSKGELNAHIRKHTGDHPFICTTCGAGFTTSSSLVKHRRIHTGERPYACEFCPMRFSALGTLKNHRRTHTGERPYVCKYCDRAFAQKSDCMTHMRTHTGERPYMCTVCGLSFSKSGALKSHQQLHRAEEVKDEVAGNTPTIPENNRSASMDVDVCVLGEVYNVPEELKGDILQEQHTVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00717966;
90% Identity
-
80% Identity
-