Basic Information

Insect: Dysmachus trigonus
Gene Symbol: mRpL35
Assembly: GCA_949715965.1
Location: OX454320.1:40903612-40914572[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.8e-06 0.0015 20.2 1.3 1 23 252 274 252 274 0.98

2 17 8.2e-05 0.016 17.0 1.5 1 23 280 302 280 302 0.95

3 17 0.0012 0.23 13.3 0.7 1 23 308 330 308 330 0.96

4 17 3.1e-05 0.0059 18.3 6.0 1 23 336 358 336 358 0.97

5 17 4.6e-07 8.9e-05 24.1 0.5 1 23 364 386 364 386 0.98

6 17 0.0012 0.24 13.3 1.0 1 23 392 414 392 414 0.98

7 17 0.12 23 7.0 3.4 3 23 422 442 420 442 0.97

8 17 0.00014 0.027 16.3 0.2 2 23 447 468 447 468 0.97

9 17 0.00055 0.11 14.4 1.2 1 23 642 664 642 664 0.96

10 17 0.00033 0.064 15.1 5.4 1 23 670 692 670 692 0.98

11 17 1.5e-06 0.00029 22.5 0.5 1 23 698 720 698 720 0.98

12 17 0.0023 0.44 12.4 3.4 2 23 727 748 726 748 0.96

13 17 0.0051 0.99 11.3 1.1 3 23 756 776 754 776 0.97

14 17 0.00041 0.08 14.8 0.1 2 23 781 802 781 802 0.96

15 17 3.7e-06 0.00071 21.2 2.5 1 23 809 831 809 831 0.99

16 17 0.00011 0.021 16.6 3.5 1 23 837 859 837 859 0.95

17 17 0.048 9.3 8.3 1.4 1 13 865 877 865 879 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.8e-06	0.0015	20.2	1.3	1	23	252	274	252	274	0.98
2	17	8.2e-05	0.016	17.0	1.5	1	23	280	302	280	302	0.95
3	17	0.0012	0.23	13.3	0.7	1	23	308	330	308	330	0.96
4	17	3.1e-05	0.0059	18.3	6.0	1	23	336	358	336	358	0.97
5	17	4.6e-07	8.9e-05	24.1	0.5	1	23	364	386	364	386	0.98
6	17	0.0012	0.24	13.3	1.0	1	23	392	414	392	414	0.98
7	17	0.12	23	7.0	3.4	3	23	422	442	420	442	0.97
8	17	0.00014	0.027	16.3	0.2	2	23	447	468	447	468	0.97
9	17	0.00055	0.11	14.4	1.2	1	23	642	664	642	664	0.96
10	17	0.00033	0.064	15.1	5.4	1	23	670	692	670	692	0.98
11	17	1.5e-06	0.00029	22.5	0.5	1	23	698	720	698	720	0.98
12	17	0.0023	0.44	12.4	3.4	2	23	727	748	726	748	0.96
13	17	0.0051	0.99	11.3	1.1	3	23	756	776	754	776	0.97
14	17	0.00041	0.08	14.8	0.1	2	23	781	802	781	802	0.96
15	17	3.7e-06	0.00071	21.2	2.5	1	23	809	831	809	831	0.99
16	17	0.00011	0.021	16.6	3.5	1	23	837	859	837	859	0.95
17	17	0.048	9.3	8.3	1.4	1	13	865	877	865	879	0.91

Sequence Information

Coding Sequence: ATGTCGAAGACTTGTTTAGTTTGTAATGAACCTCATTTAGTTGGGATTAATATCCTCTCTAATCGGAAAAAGCTGGATTCTGTGCTAAAACAGGTGCTGGGACTGGAGGGCAAACAGGACGACTGCCTCTGTAAAATGTGCTATGAACAGGTAATAAAAGTGTTCGAAGCTAAGCAGAAGTTTGACTGGCCCAATCCGCTCGAGCACAAAATTCTGAGGAGTAATGAGGAACTTGATGaagaTGAAAGTGAGCCTAAAACAGAAATTGGGGACTCCCCGAGCGTAGTAAAAATTGAACCCAAAGCTGAAGACGAGGAGgattttgccatttttaatgCTGAAACTACGGACTTTAATTTTGATGATCAAACTCTAAAATCTGACcataaattagaattaaaagcAAATTTCAGTCTGGGCGAATATGAGGAAGTTAAACTTGAAACAAAAAAGAAGGAACCGGATGTTTCCTCTGAAGACGATTTTCAAACGAAAGCAGAAATTATAAGCTCTTGGAAAAAGTCAAAAGTGAAAATGGAACCTGAAAGTGTTGTAGAGTTGGGTTTTAATACTGATACTCTCGACAGTGATTCCAGGCAGAATCTAAGCGATAATATTGAAGAATATCGCGTGCATTTTAAAAAGGAGAAATCAGTTGATATAGAGGATACGGCTGATGAGGAGTCCAAAGGTATGACAGAAGATAAGGGCCCAGATTCAGAGGAACTGAATGAACCAAATGTTCAAGGGAACTTTGTGTGCGAGGAATGTGGtaaaagttttcgaaaaatatatacTCTTAAGATGCATAAGAAGATACATACTAGAGAAAGGCCCTTTTTGTGCCAGTTATGCCCTAAAGCTTTCGTATCAAATTGCTATTTAAATCTCCACATGTTAACACACACGAATAAAAGACAGTTCGCCTGCTCTGAATGTGAAAAGAGTTTTAGTTCCATTCAGAGGCTCAAAATTCATAACATGTCCCATACAGGAGAAAAACCTCATCACTGCCTCTACTGTTCTAAAAATTTCACGACCAGTAGTCAACTCCGGGTTCATGTTCGAACGCATACAAAAGAAAAACCTTTCGTTTGTTCTGAATGCGGCAAAGGTTTTGCGGAAAAATACAAACTAAGGATTCATATGCGATCGCATACGAAAGAGAAACCATACACTTGTTCTGATTGTGGAAGAAATTTTGCCACGACAACAATTCTTGGGCGTCACAAGAAGACCCATTCCGGAGATAAACCCTACGGTTGCGCATATtgttctaaatattttaaatcacaTCAGGGACGTCAGTCGCACCAGAAATCGCATGAGAAACCACGCGTCTGCAGTGATTGTGGAATGACTTTCGTCACCTGGAGAGAGTGGACTCTGCATAAGAAaattcacattaaaaaaaaagactctCACGCCAAACAGGACGACTACCTCTGTAAAATGTGCTGCGAAAAGGTAGTAAAAGATTTCAAAGCTAAGCCAAACCTTTACCAGTCCAATCCGCTTGAGCAAAAAATCTTGACAAGTAATGGGGTTTTTGATGaAGATGAAAGTGAGTCTAAAACAGAAATTGTGCCCCCCTCGAGCGTGCTGAAAATTGAACCCAAAGCTGAATACGAGGAGAATTTTGCGGATGCTGCGAACTTAGATTTTGAAGATCAAACTCTAAAATCTGACCATAAGTTAGAATTAAAAGCCAATTTCAATCTGGGCGAATATGAGGAAGTCAACCCTGGACCAAAAACAAAAGAACCAGATGTGTCCCCTAAAGATGATCTTCAACTGAAAGAAGAACTTCTGAACTCCACCAACAcgtcaaaaatgaaaattgagctCGGAAGTGAAGTAGAGGTGAATTTTAATACTGAAACTCTCGACACTGTCATGCAAACACGCTCGAATGAAAGACAGTTCGCCTGTTCTGAATGTGAAAAGAGTTTTAGTACAACTCAAAGGCTGAAAATTCATAACATGTCCCATACAGGAGAAAAACCTCATCAATGCCTCTACTGCTCTAAACATTTTACGACCGGCACTCAACTCCGGGTTCACGTTCGAACGCATACGAAAGAAAAACCTTTCGTTTGTTCTGAATGCGGCAAAGGTTTTGGGGAAAAGTACAAATTAAGGATTCATATGCGATCGCACACGAAAGAGAAACCATGCACTTGTTCTGAATGTGGGAGAAGTTTTGCCACGACGACAATTCTTACTCGTCACAAGAAGTCCCACTCCGATGAAAAAACCTTCGGTTGCGCATATTGTTCTAAACGTTTTAAATCATATGGGGGACGTCAGTGGCACCAGAAATCGCATGAGAAACCACGCGTCTGCAGTGATTGTGGAATGACTTTCGTAACCTGGAGAGAGTGGACGCTGCACAAGGAAATTCACATGGAAAAAAAAGGATCTTACGAATGCTTGAAATGTCCTAAAACATTTAGAAGAAATTGTGATCTACTTGCGCACTTACGATCACACACGAATGAGAAACGACATATTTGCCTCGAGTGCGGAAAGGGTTTTTCGACCTCGACGCACCTCAAAGTTCATAATAAGCAACATACAGGGGAAAGACCCTTTAAGTGTAGCCACTGTTCGAAAGGTTTCACTACGAATACTCTCTGCCTAGGAAGGGCAGGgattcaagaaatccaaaagATAGCATGCCGAAGTACTCCAAGTACTCTCAGGCTGCTTCCACAGATCATCCAGCCACAGAGAAACTTAAGCTCCGCCTTAACACAGTCACATTTCTTCCCCAGAACTGATCTATCTGCGACGACGTCTCCTGTTTTAACAAGATCCACTTTGTTGCAATGTCTAAGGCCTTGCCTTTCTCAAAGCAGGACTGTTACAAAGTTCTCACTAAGGAAAGGAAAGAGGAAAACCGTGAAAGCAGTCATTAAGCGGTTTAAACGCCTGCACTGGGGTGGCTGGATAAGGACCCGGAGTGGACGCCACAAGAAACTGTGGAAGAAATCGAAGGCTCTCAAACGCCGATTAAAGCAACATGTCTTTGTTAATGCAACCCAAAGTTGGCTTCTTGATAAAATGGTCACAAAATATTGGAAACGGCCCAGATATTACATTGATGACCCTTACGAGCCGTATCACACTCGGGATGAATATTTTGCTACTAAGGGAAAACCACTAATTTGA
Protein Sequence: MSKTCLVCNEPHLVGINILSNRKKLDSVLKQVLGLEGKQDDCLCKMCYEQVIKVFEAKQKFDWPNPLEHKILRSNEELDEDESEPKTEIGDSPSVVKIEPKAEDEEDFAIFNAETTDFNFDDQTLKSDHKLELKANFSLGEYEEVKLETKKKEPDVSSEDDFQTKAEIISSWKKSKVKMEPESVVELGFNTDTLDSDSRQNLSDNIEEYRVHFKKEKSVDIEDTADEESKGMTEDKGPDSEELNEPNVQGNFVCEECGKSFRKIYTLKMHKKIHTRERPFLCQLCPKAFVSNCYLNLHMLTHTNKRQFACSECEKSFSSIQRLKIHNMSHTGEKPHHCLYCSKNFTTSSQLRVHVRTHTKEKPFVCSECGKGFAEKYKLRIHMRSHTKEKPYTCSDCGRNFATTTILGRHKKTHSGDKPYGCAYCSKYFKSHQGRQSHQKSHEKPRVCSDCGMTFVTWREWTLHKKIHIKKKDSHAKQDDYLCKMCCEKVVKDFKAKPNLYQSNPLEQKILTSNGVFDEDESESKTEIVPPSSVLKIEPKAEYEENFADAANLDFEDQTLKSDHKLELKANFNLGEYEEVNPGPKTKEPDVSPKDDLQLKEELLNSTNTSKMKIELGSEVEVNFNTETLDTVMQTRSNERQFACSECEKSFSTTQRLKIHNMSHTGEKPHQCLYCSKHFTTGTQLRVHVRTHTKEKPFVCSECGKGFGEKYKLRIHMRSHTKEKPCTCSECGRSFATTTILTRHKKSHSDEKTFGCAYCSKRFKSYGGRQWHQKSHEKPRVCSDCGMTFVTWREWTLHKEIHMEKKGSYECLKCPKTFRRNCDLLAHLRSHTNEKRHICLECGKGFSTSTHLKVHNKQHTGERPFKCSHCSKGFTTNTLCLGRAGIQEIQKIACRSTPSTLRLLPQIIQPQRNLSSALTQSHFFPRTDLSATTSPVLTRSTLLQCLRPCLSQSRTVTKFSLRKGKRKTVKAVIKRFKRLHWGGWIRTRSGRHKKLWKKSKALKRRLKQHVFVNATQSWLLDKMVTKYWKRPRYYIDDPYEPYHTRDEYFATKGKPLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -