Dtri035497.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dysmachus trigonus
Gene Symbol
-
Assembly
GCA_949715965.1
Location
OX454322.1:80940917-80943872[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.00031 0.059 15.2 5.7 1 23 245 267 245 267 0.98
2 14 1.5e-07 2.9e-05 25.6 2.7 1 23 273 295 273 295 0.99
3 14 3.6e-05 0.0069 18.1 0.5 1 23 301 323 301 323 0.96
4 14 2.6e-05 0.005 18.6 0.8 1 23 329 351 329 351 0.97
5 14 4.4e-07 8.5e-05 24.1 0.7 1 23 357 379 357 379 0.98
6 14 2.9e-06 0.00056 21.5 2.2 1 23 385 407 385 407 0.98
7 14 2.3e-06 0.00045 21.8 1.0 1 23 413 435 413 435 0.97
8 14 6.9e-07 0.00013 23.5 3.5 1 23 441 463 441 463 0.98
9 14 2.5e-05 0.0049 18.6 0.9 1 23 469 491 469 491 0.98
10 14 0.0068 1.3 10.9 2.7 2 23 496 518 495 518 0.95
11 14 0.0014 0.28 13.1 3.2 1 23 668 690 668 690 0.96
12 14 7.9e-07 0.00015 23.3 1.8 1 23 696 718 696 718 0.98
13 14 0.00027 0.052 15.4 0.7 3 23 726 746 724 746 0.98
14 14 0.021 4.1 9.4 2.8 2 23 751 773 750 773 0.94

Sequence Information

Coding Sequence
ATGTCGAAAACATGTTTTGTGTGCAAAGAAACCCATTTGGAAATGATCAGCATATTCCAGCATCCGGAGAAACTGGATTCCACTCTAAACTATTTGCTGGGACTGcagGCCAAACAGGATGATTACCTGTGCAAAGACTGCTGCGATGAAGTAATAAACACGTTTAAATCGAAACGGAAATTTAATCAGTCCAACGCGAAGTCGCTGCGGGGCGATGAAACCCTTTTTAAAGAAGAAAGTTTTCCTGGGCGAATTGAAGCTATGATCTCGCAAGTGCCAGAGGTGAAAATTGAGCAGAATAATGAAGAACTAGAGAGAAGCTTCCACGAATTAAGTGAGGGCACAGAACCCAAGAAATTAGTAGAACAGGTAGGAACGGGTGAAGATACTAAACAAGAACCTGTAGCTCGGAGAAGTTTTGTGAATTCTTATAaagatgaaagGGACAGTGCAAAAAACGATGAAGTTTTAAAGGAAGTCGCTCTTGATGCTGACCTAGAACAAATTAGTGACGATGACAATATAAATTGCAGAGATAAGTTAAAAGCCGAAACGTTATCTGATGTTGAGGTTAGCAGCGATGAGTTTCATCTTAACGGTggaaaagagaaaataaaaaactctATCTGTAGCTCTGAATTTTTAAAGGATCAAACAAAAGAGAACAAACTTGTACAAGAAGCGGGAGAAGAACCGATCGTTCATTCAAATGAGAAATCATGTACTGCACCCTTCACCTGCTGCTCttgttttaaaactttcattACAAACAGCAAACTTAAGAGGCACGAGAGAATCCATACAGGAGAAAAACCCTATACCTGCTCCTACTGCCTTAAGACTTTCAGTTCTAATAGCAATCTTAGAATTCATTTGCGCAGACATACGAAAAAGAAATCGCACATTTGTTCTGATTGcggaaaaggttttttttcttcGGCTGCTCTTAGATATCATATAACGATCCACACCGGAGAAAGAGCATATACCTGCCGCTATTGCTCTAAAACGTTCGCTACCAGTTCTGTCCTGTCAAGACACGCACTAATTCATACGAATGAAAAACTATTCGAGTGCTCTGTATGTGGAAAGAGTTTTATCACCTCTTCAAGACTTAAGGATCACACAAGGATCCACACTGAAGGTGCACCCTATGCCTGCTCCCACTGCCCTAAgactttcaaaattaaaagcaGTTTAAATATTCACGTGCGCAGACATAAGAAAGTCAAATCACACACTTGCTCTGATTGCGGAAAAGGTTTCTTTTCTTCGTCCGGTCTTCGGGCTCATAGAATGGTCCACACTGGAGAAAGGCCCTATGCCTGCCATGAATGCACTAAAACTTTTAGTAGGAGTGCTACCCTTTGGAAACACAAGCGCACTCATACGAAGGAAAAACCATTCGAATGCTCTCAATGTGAACAAACTTTTGTCAATTTGCCAAGTCTTAAAAAACACAAGAGGATCCACACTGGGGAGATACCCTGCCTCTATTGCTCTAAAACTTTTAAGAAAAGTTCCAATCACTTGCTTCACATTCAAACGAAGCATGCGAAGGAGGTGAATGCTGCCGATTCCGAAAAAAAGTTGCATCAGTCCAATCCGCCGAACCCTAAATCATCAAAGAGTGATGGGGCTGTTTGCAAAAATGACATCGACGTTGACCAAACTGAAATTGAGATTTCATCGAGCGAGTTTGAGAGGGAAATTAAGTCCGAATGTAAAGATGAGTTAGAAGACATATTGAAGACTAACAATTTGGAATTAGGAAACCAATTTGAGACAGTTGAAAATGTAGAAGTCTGTCCTGAAGAAGAGAGTAGGGCTGGTGTCACTATTAAGACTGAAAATGGGTCTGCACTTTCAAGTGAAATTCCGATCTCTTCACCGCATATCTCAGAAATGGAGAGTCACAAGAGAACCCACACAGGAGAAAAACCCAATGCCTACAACTATCGCCCAAAGACTTCCAGTTTTAAAGACATTGTCAGGATATCGCACGTTTGTTCTGATTGCGGAAAGGGGTTTGTTTGTTCGCAAAGTCTTCAGCGACACAGAACAGTCCACACCGGAGAAAGGCCCTATGCCTGCCATGAATGCTCTAAAGCTTTTAGTACGAGTGCTGCTCTTTCGAGGCACAAGCGAACTCATCCGAAGGAGAAACCATTCGGGTGTTCTCAATGTGAACAGACTTTTGTCAATTTGCCAAGTCTTAAAAAGCACAAGAGGATCCACACTGCGGAGATACCCTGCCTCTATTGCACTAAAACCTTCAAGAAAAGTTCCAATCATTTGCTTCACGTTCAAACGAAGCATGCGGAGGAGGTGAATGCTGCCGATTCCGAAAAAAAGTTGCATCAGTCCAATCCGCCGAACCCTAAATCATCAAAGAGTGATGGGGCTaaaatgaaattgattattGTTGACCAAACTGAAATTGAGATTTCGTCGAGCGAGTTTGAGATGGAAATTAAGTCCGAATGTAAAGATGAGTTAGAAAACATGTTGAAGCCTAACAATTTGGAATTAGGAAACCTATTTGAGACGATTGGAAATGCAGAAGTCTGGCCTGAAGCACAGAGGAGTATTGGTGTATCATAA
Protein Sequence
MSKTCFVCKETHLEMISIFQHPEKLDSTLNYLLGLQAKQDDYLCKDCCDEVINTFKSKRKFNQSNAKSLRGDETLFKEESFPGRIEAMISQVPEVKIEQNNEELERSFHELSEGTEPKKLVEQVGTGEDTKQEPVARRSFVNSYKDERDSAKNDEVLKEVALDADLEQISDDDNINCRDKLKAETLSDVEVSSDEFHLNGGKEKIKNSICSSEFLKDQTKENKLVQEAGEEPIVHSNEKSCTAPFTCCSCFKTFITNSKLKRHERIHTGEKPYTCSYCLKTFSSNSNLRIHLRRHTKKKSHICSDCGKGFFSSAALRYHITIHTGERAYTCRYCSKTFATSSVLSRHALIHTNEKLFECSVCGKSFITSSRLKDHTRIHTEGAPYACSHCPKTFKIKSSLNIHVRRHKKVKSHTCSDCGKGFFSSSGLRAHRMVHTGERPYACHECTKTFSRSATLWKHKRTHTKEKPFECSQCEQTFVNLPSLKKHKRIHTGEIPCLYCSKTFKKSSNHLLHIQTKHAKEVNAADSEKKLHQSNPPNPKSSKSDGAVCKNDIDVDQTEIEISSSEFEREIKSECKDELEDILKTNNLELGNQFETVENVEVCPEEESRAGVTIKTENGSALSSEIPISSPHISEMESHKRTHTGEKPNAYNYRPKTSSFKDIVRISHVCSDCGKGFVCSQSLQRHRTVHTGERPYACHECSKAFSTSAALSRHKRTHPKEKPFGCSQCEQTFVNLPSLKKHKRIHTAEIPCLYCTKTFKKSSNHLLHVQTKHAEEVNAADSEKKLHQSNPPNPKSSKSDGAKMKLIIVDQTEIEISSSEFEMEIKSECKDELENMLKPNNLELGNLFETIGNAEVWPEAQRSIGVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00628578;
90% Identity
-
80% Identity
-