Dtri035500.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- -
- Assembly
- GCA_949715965.1
- Location
- OX454322.1:80953659-80956456[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 9.1e-05 0.018 16.8 4.3 1 23 238 260 238 260 0.97 2 14 3.8e-06 0.00073 21.2 2.0 3 23 268 288 266 288 0.96 3 14 1.3e-06 0.00025 22.7 4.2 1 23 294 316 294 316 0.99 4 14 9.2e-06 0.0018 20.0 1.7 3 23 324 344 323 344 0.98 5 14 1.4e-07 2.7e-05 25.7 2.4 1 23 350 372 350 372 0.98 6 14 1.6e-05 0.0031 19.2 1.0 1 23 378 400 378 400 0.96 7 14 7.7e-05 0.015 17.1 2.0 1 23 406 428 406 428 0.98 8 14 5.5e-05 0.011 17.5 0.4 1 23 432 454 432 454 0.96 9 14 1.3e-06 0.00025 22.7 1.6 1 23 460 482 460 482 0.97 10 14 9e-05 0.018 16.8 0.5 1 23 488 510 488 510 0.96 11 14 6e-07 0.00012 23.7 5.6 1 23 516 538 516 538 0.98 12 14 0.00012 0.023 16.5 2.4 1 23 544 566 544 566 0.98 13 14 0.013 2.5 10.0 2.6 2 23 571 593 570 593 0.94 14 14 2.6e-05 0.005 18.6 0.3 2 23 809 830 808 830 0.97
Sequence Information
- Coding Sequence
- ATGTCGAAAGCATGTTTTGTGTGCAAAGTACTCCATTTGGAAATGATCAGCATATTCCAGCATCCGGAGAAACTGGATTCCATTCTAAACTATTTGCTGGGACTGCAGGCCAAACAGGATGATTACCTGTGCAAAGACTGCTGCGAAGAAGTAATAAATGCGTTCCAATCGAAACagaaatttaatcaattcaatgCGAAAACGCTGCAGGGCGGTGAAACCCTTTTTAaagaagaaatcaattttcCTGGGCGAATTGAAGCTGTGATCTCGCAAGTGCCAGAGGTGAAAATTGAGCAGAATAATGAAGAACTAGAGAGAAGCTTCCACGAATTAAGTAAGGGCACAGAACCCAAGAAATTAATAGAAAAGGTAGGAACGGGTGAAGATACTAAACAAGAACCTGTAGCTCGGAGAAATTTTGTGGATTCTTATAaagatgaaggTGCAAAGAACGATGAAGTTTTAAAGAAAGTCACCGAGATTGAAACTGTTACTGTTGATTTAGAACAAATTAGTGGCAAGGACAGTCAGAATTGCAGAGATAAGGTAGAGACGTTATCTGATGTTGAGGATAGTAACGATGAGTTTGATCTTAACGGTGCAAAAGAGAGCATAAATTACACAAAGGAGAACGAAGTTGTGCTGGAAAATACGGGAGAAGAGCCGTTAATTTATACAAATGAGAAATTATGTACTGCAGAAAGACCCTTCACCTGCTGTTACTGCTCTAAAACTTTCATTACTAGGAGCAAACTCAAAGAACACGTGTCTATTCATATGAAGGAGAAATCACACTTATGTTCTGACTGCGGAAAggcgtttaaatttttaagtgctCTTAAGCAACACAGAAGGATCCACACCGGAGAAAAGCCTTACACCTGTAGCTATTGCTCTAAAACTTACAGATCCTATTCTAGTTTATACAAGCACATACGCACTCATTCGAATGAGAAGCCCCATGGGTGCTCTAAATGTGGAAAGAGATTTACCACTTCGACAAGTCTTAAAAGTCACGAGAAAATCCACACAGGAGAAAAACCCTATATCTGCTCCTACTGCCCTAAGGCTTTCTGTTCTAAAAGTAATTTGACAGTTCACGTGCGCAGACATATGAATGACAGATCGCACATTTGTCCTGATTGCGGAAAGGGTTTCATTTCTTCGCGTACTCTTAGATATCATAGAACGGTCCACACAGGAGAAAGGGCCTATACCTGCCGCTACTGCTTTAAAACGTTCGCTACCAGTTCTGCCGTCTCAAGACACAAAAACATTCATGAAAAACGATTCGAGTGTTCTGTATGCGGAAAGTATTTTATCACCCCTTCAAGGCTCAAGGATCACAGCAGTGTCCACACTGGGGAGACACCTTATGCCTGCTCCTACTGCCCTAAGACTTTCAGTTCTAATAACTATCTCAAGACCCACTTGCTCAGACATACGAAAAAGAAATCGCACATTTGTGTTGATTGTGGAAagggttttattttttcacaagGTCTTAAGCGCCACAGAATAATCCACACAGGAGAAAGGCCCTATGCCTGCCATGAATGCTCTAAAACTTTTAGTCAGAGATCTACCCTTAGGAAACACAAGCGCACTCATACGAAGGAAAAACCATTTAGGTGCTCTCAATGTGAACAGAGTTTTTTTACCTTGCCAAGTCTTAAAAAACACAAGAGGATCCACACTGGGGAGATACCCTGCCTTTATTGCAGTAAGACTTTCAAGAAAAGTTCCAATCATTTGCTTCACATTCAATCGAAGCATGCGAAGGAGGTCAATTCTGCCGATTCCGAAAAAATGTTGCATCAGTCCACTCCGTCGAACTCTAAATCACCAATGAGTGATGTGGCTGTTTCGAAAAATCAAATAGATCTTGTTGACCAAACTGAAATTGAGATTAAGTCGGAATGTAAAGATGAGTTAGAAAACATGTTGAAGACTAACAATTTGGAATTGGGGAACCAGCCTGAGACGACTGGAAATGCAGAAATCTGTACTGAAGCACAGAATAGTGTTGGTGTCACTATTAagACTGAAAATGAGTCTGTGCTATCAAATGAAATGTCGATCTCTTCACCACATATCTCAGAAGTGACTGATTTAGAGATGGATTCAAGTCAAAATCGTTTTGATAACATCGAGGGTTGTCAGGAGTTCCTCAGAAGTGAAAAATCGATGGATATTAAGTTGGAGGTTCACCATGAGAGAAAAAATCAGCAAGCTGAAAATAGTTCAGTATTAGAAAAACAGTCGCAGAAGGTGGAAATTGGTGGGAGGGTTTTACAGCAACAACcgatcaaacaaaaaattattaatacaatAAAACAATTCACGACGAAACCCCACGTGTACAGTGCAAGCGGAAAGCTTTTCGTCGTCCCAGAGAAGCTTAAGATTCATAAGAAAATCGTGTGCAGTGAATGCGGAAAGGGCTTTATCACCATGGAAAAACTTACGATACATACAAAAACCCACAAGGAAGAAAGATCGACGTGA
- Protein Sequence
- MSKACFVCKVLHLEMISIFQHPEKLDSILNYLLGLQAKQDDYLCKDCCEEVINAFQSKQKFNQFNAKTLQGGETLFKEEINFPGRIEAVISQVPEVKIEQNNEELERSFHELSKGTEPKKLIEKVGTGEDTKQEPVARRNFVDSYKDEGAKNDEVLKKVTEIETVTVDLEQISGKDSQNCRDKVETLSDVEDSNDEFDLNGAKESINYTKENEVVLENTGEEPLIYTNEKLCTAERPFTCCYCSKTFITRSKLKEHVSIHMKEKSHLCSDCGKAFKFLSALKQHRRIHTGEKPYTCSYCSKTYRSYSSLYKHIRTHSNEKPHGCSKCGKRFTTSTSLKSHEKIHTGEKPYICSYCPKAFCSKSNLTVHVRRHMNDRSHICPDCGKGFISSRTLRYHRTVHTGERAYTCRYCFKTFATSSAVSRHKNIHEKRFECSVCGKYFITPSRLKDHSSVHTGETPYACSYCPKTFSSNNYLKTHLLRHTKKKSHICVDCGKGFIFSQGLKRHRIIHTGERPYACHECSKTFSQRSTLRKHKRTHTKEKPFRCSQCEQSFFTLPSLKKHKRIHTGEIPCLYCSKTFKKSSNHLLHIQSKHAKEVNSADSEKMLHQSTPSNSKSPMSDVAVSKNQIDLVDQTEIEIKSECKDELENMLKTNNLELGNQPETTGNAEICTEAQNSVGVTIKTENESVLSNEMSISSPHISEVTDLEMDSSQNRFDNIEGCQEFLRSEKSMDIKLEVHHERKNQQAENSSVLEKQSQKVEIGGRVLQQQPIKQKIINTIKQFTTKPHVYSASGKLFVVPEKLKIHKKIVCSECGKGFITMEKLTIHTKTHKEERST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -