Dtri034066.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- -
- Assembly
- GCA_949715965.1
- Location
- OX454322.1:65689720-65703592[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.00023 0.044 15.6 2.5 1 23 186 208 186 208 0.97 2 19 4.2e-07 8.1e-05 24.2 1.9 2 23 214 235 213 235 0.97 3 19 0.0013 0.25 13.2 0.1 2 23 242 263 241 263 0.96 4 19 0.01 2 10.4 0.5 1 23 307 330 307 330 0.94 5 19 2e-05 0.0038 18.9 3.7 1 23 344 366 344 366 0.96 6 19 2.4e-06 0.00047 21.8 1.1 1 23 372 394 372 394 0.97 7 19 1.9e-05 0.0038 18.9 1.7 1 23 400 422 400 422 0.97 8 19 3e-06 0.00057 21.5 3.1 1 23 428 450 428 450 0.98 9 19 0.00014 0.028 16.2 0.7 1 23 456 479 456 479 0.94 10 19 0.0055 1.1 11.2 2.2 1 23 977 999 977 999 0.98 11 19 6.1 1.2e+03 1.7 0.2 1 22 1004 1024 1004 1027 0.65 12 19 0.0032 0.61 12.0 0.2 2 23 1032 1053 1031 1053 0.96 13 19 0.45 87 5.2 6.3 1 23 1064 1087 1064 1087 0.96 14 19 0.0013 0.26 13.1 0.5 1 23 1095 1118 1095 1118 0.91 15 19 1e-05 0.0019 19.8 1.3 1 23 1130 1152 1130 1152 0.95 16 19 0.00021 0.041 15.7 1.3 1 23 1158 1180 1158 1180 0.97 17 19 2.4e-05 0.0046 18.7 2.8 1 23 1186 1208 1186 1208 0.97 18 19 5.6e-06 0.0011 20.6 1.2 1 23 1214 1236 1214 1236 0.97 19 19 9.5e-06 0.0018 19.9 0.7 1 23 1241 1264 1241 1264 0.98
Sequence Information
- Coding Sequence
- ATGGAATATGTGCAAGGATGCTGCAGGATTTGTTTAGCTAGCTACTTCAAGGGTCAATCGCTATTTATCACGTACAATAATGAATACCTGCCAGAAGTCATCGCAAACATCTCAGGGGTTCATGTAAGTGAGGACGATGGACTTCCATCCACATTATGTCTCGATTGTGCCGATCTTCTGCTGCAAGCACAGAACATCAAGAGAGCGTGTCTGTCCTCCGACGTTTTCTTGCGATCCCAGCTCAACGCAATATTTAGCGAACAGGAGCACCCCACCTGCTCGGAATTGAGAAATAAAGACCTGGACGACAGCATTATTTGGAGTCAATTAAACGAGAACATTTTCGATAGTCTTGTTCAGGCAGAGAATGATGAGAATCTCAGGCAGGAGCTCGACAAGTACTTTGAGACAAATTCGACCAAAGAAGGCAGTAGCCAGCAAACAGATGAGCAAATGGAGCAATTTTCAGATGGTGATCAGATGAGCGAGAAGCTAGTTAAAGAAGACTGCAACAGTTCGAAAGGAGATGAAGGTCTCAATGTTCCACAACAGTcgtacgcttgtaatctatgcTCGAAAAAGTTTGTAAACAAATTGGCCTTCAGGCGACACCAAAAATATCATTCACAAGACAAGACAAAATGTCCAGTCTGTCCACGGGAATTTTCTCACAAATCGAACCTCAAGAGGCATCTTTCAGTGCATAAAGAAGACTGTGAATTGGTCTGCGACCAATGCGGCGATGTTTTCAGTAACTCGAAAGAGTTGTACGAGCACCTTAAGGCACATAGCAAGTATAGTGACGAGGATAGGGACGAATATATCCTCGATTGTGGACTGTGCGATAATAAAACCACTTCTCTTGCAAGTCACTTGGTCCATATGAGGGAAAAGCATAACGTAGAGGACGCAAAGCCCTTTAAGTGCGCCATGTGCAGTATGAAATTCGCATCAAAGCAGGGAATGTATCGGCACATCGACAATATCCACGAAAATAATCGTCGCAATTTAAGAAATCGCGATAAAAACTTCCTCTGCAACAATTGCGGTAAGAAATTTTATACGAATTTTCACCTGGACGTACACATGCGATCACATACCGGCGAACGCCCCTTCAAATGCCAGGTATGCGGGAAATCGTTTTCTCAGCTGTCGGGACTAAAGATGCACACGTTCATCCACACCGGAGAAAAACCGTTTGCCTGCAAAATATGCGggaaaaaattcaatcaatACGGACACGTTCGGGAACACCTTTTGACCCACTCCGACGAACGACCCCACGTCTGTAAAGTCTGCAATCACTCGTTCAGGGTTAAGGGGAACCTTACCGCACACATGATGACCCACACGGGTAAGAAACCCTTTTCTTGTAAGAACTGCGGAAAAGGTTTCATGCAACGCGGCAAACTGAAAGCTCACGCTGATAAATCTCACGCGggatcagcattttttttagaAGAGCATGGACTGAAatttcccCGGGATCAGGAAACGGTTGAACTCTGGCTGAAGGAAATTGGCAGAGAAGGGGCTGTTATAAATGATAATAGATTTGTTTGCGAGGATCACTTTGATGCATCGCTTATCTTCCAGTGGAAAGATAGAAAAGTTATTGACAAGGAGGCAACTCCTTTTCACGATTACAGAGCCTGCCCAATCTGTTCAAATCCCGATAAGGCGAGTAGTCCCCGTACTCTAGACGTTTCACCGACTTTCCTTACATCTCTTGAGATCACCCCGCTGTCCTACATGGATATATCTGCTCATGATACCACTGGTGACTTAGAAGTAAAAGAGGAAATTGAAAGTGCACCTAAGACATCACTTGATTTTATGGATACATCTTTAAATGAATATCAAAATGTAGAAGTACTAACTGAAGCCGAGACAGAAAATAAGCATGCAGAGCCCATTCCAAATTTACATAGTAAAATTTTCTTAGAGCCAGATATCTTAGAATGTTCAGCCAATCCGATAGAATCTGAACCGATTAATTCAATGGAGCGTATAAAGGGAATCTGCAGAATTTGTTTGGCTAACTATTTTATAGGACAGTCCATATTTATGATCTATAAGATGAAATTTCTACCCCATATCGTTTTTAATCTCACGGGGAATCTTCCAACGAGGGACGATGAACTTCCATCGATGATTTGCTTCACCTGTGCTGAACTACTTTTACAGGCGGAGGCTGCTAGGAAAAGGTGCATTTCTTCAGATAAGTTTTTGAGGAAACAATTGGAACAGAAAAATAACGATACGAAACCAATAGAAATCATGAAGCCTCAAAAAGAAGATTTAGACCAAAACATTCAgccaaatgaaaataattttgaaagtgcCCAAATTTCTACTCCTTCGAATAGCCCGAACAAGCCAAGTTCTGTCAGCGTAGCTATGGAGCACAATTATATAAATTCCGATAATAGAAAGGAAACTAAGGAAATtagagttaaaaaaattaaaagtttacaaATTGGAGAACTATTGAACATAATAGAAGAGAGactggaagaagaagaaagtcTTAATAAAACAGAATATAATCCAAACATCGAGGAATACAGTAAAGAAAAAACAGAATATGATCCAAACATCGAGGAATACAGTAAAGAAAAAACAGAATATGATCCAAACATTGAAGAATATAGTaaagaaaaaatagaatatagTCAGAACATTGAAGATTATAGTAAAGAAAAAACAGAATATAATCCAAGCATaggagaagaaaatttaaacatcAGCGACGATAGCCAAAACATGGAAGAGGAAAATCCTCTTGAAGCGCAATATTTGGATGATGAAGTCCTCTATGACGAACTATTTTCAGAAACCAACGTacaatataaagaaaatgttgAACTTAGTATAGATAATGACGGTCCCGATCCTCTAGGTATGGGGATAATTCTTCCTGAATTATTTGTGTGTACTGTATGTTCGAGAAAAATCACAAGCTTAAGGGCTTTCAAACGCCACCAAAAATACCACAACGCTGAAAATTTTAGGTGTCCAATTTGTCCAGACGAACTTACGCCTAAAACGATCAAAGACCATCTGTACAAACACCAGGAAAGACAAGAATTAACTTGTGGTGATTGTAATAAACATTTTGACGATATAATAGAATTATACGATCACATAGTCACCCATGCAAAAGCGTATAGAAGATTATTATATTTGCATGAATGTGAGATATGCCACAAAAGCACAACTTCCTTAGCAACTCATCTAAACCATATGAAAAAGAAGCACAATATAAAGGTACATAAACCGTTTAAATGCGACAAATGTGGGATGAAATTCACTGCAAAGCTGGGTTTACAACGGCATGAGGACAATATCCACAATCAAGATCGTCGTATGAATCGAGAAAGAAAATTTCTTTGCTCGACATGTGGCAGAAGGTTTTTCACAAAAGGCACCTTACAAGTACATATACGATCACATACTGGAGAACGTCCGTACAAATGCAAATACTGTAATAAATCATTCGCTCAAATTAATAGCGTAACTGTACATACTTACATTCATACTGGTGAAAAGCCTTTCATCTGTAATGTATGTGGAAAAAGGTTTAAGCAGTACTCCCACTATGATTATCATATGTTAATCCATGCGGATAAACGGCCTCATGTGTGTAACATATGCAATCGTGCCTTCAGGGTGAGGGGCACTCTCAATACACATATGAAGATTCATGGAACTAGACCATTTCGTTGCGAGACCTGTGATAAGGGCTACCCGGAACGGTCGGGCCTGaaaaaacatatgaaaaaaATCCATGGTAGTGATTTGAATAATATGCCTCCAAAACAGGAGGAGGAACTGCTGGAAGTTGTATaa
- Protein Sequence
- MEYVQGCCRICLASYFKGQSLFITYNNEYLPEVIANISGVHVSEDDGLPSTLCLDCADLLLQAQNIKRACLSSDVFLRSQLNAIFSEQEHPTCSELRNKDLDDSIIWSQLNENIFDSLVQAENDENLRQELDKYFETNSTKEGSSQQTDEQMEQFSDGDQMSEKLVKEDCNSSKGDEGLNVPQQSYACNLCSKKFVNKLAFRRHQKYHSQDKTKCPVCPREFSHKSNLKRHLSVHKEDCELVCDQCGDVFSNSKELYEHLKAHSKYSDEDRDEYILDCGLCDNKTTSLASHLVHMREKHNVEDAKPFKCAMCSMKFASKQGMYRHIDNIHENNRRNLRNRDKNFLCNNCGKKFYTNFHLDVHMRSHTGERPFKCQVCGKSFSQLSGLKMHTFIHTGEKPFACKICGKKFNQYGHVREHLLTHSDERPHVCKVCNHSFRVKGNLTAHMMTHTGKKPFSCKNCGKGFMQRGKLKAHADKSHAGSAFFLEEHGLKFPRDQETVELWLKEIGREGAVINDNRFVCEDHFDASLIFQWKDRKVIDKEATPFHDYRACPICSNPDKASSPRTLDVSPTFLTSLEITPLSYMDISAHDTTGDLEVKEEIESAPKTSLDFMDTSLNEYQNVEVLTEAETENKHAEPIPNLHSKIFLEPDILECSANPIESEPINSMERIKGICRICLANYFIGQSIFMIYKMKFLPHIVFNLTGNLPTRDDELPSMICFTCAELLLQAEAARKRCISSDKFLRKQLEQKNNDTKPIEIMKPQKEDLDQNIQPNENNFESAQISTPSNSPNKPSSVSVAMEHNYINSDNRKETKEIRVKKIKSLQIGELLNIIEERLEEEESLNKTEYNPNIEEYSKEKTEYDPNIEEYSKEKTEYDPNIEEYSKEKIEYSQNIEDYSKEKTEYNPSIGEENLNISDDSQNMEEENPLEAQYLDDEVLYDELFSETNVQYKENVELSIDNDGPDPLGMGIILPELFVCTVCSRKITSLRAFKRHQKYHNAENFRCPICPDELTPKTIKDHLYKHQERQELTCGDCNKHFDDIIELYDHIVTHAKAYRRLLYLHECEICHKSTTSLATHLNHMKKKHNIKVHKPFKCDKCGMKFTAKLGLQRHEDNIHNQDRRMNRERKFLCSTCGRRFFTKGTLQVHIRSHTGERPYKCKYCNKSFAQINSVTVHTYIHTGEKPFICNVCGKRFKQYSHYDYHMLIHADKRPHVCNICNRAFRVRGTLNTHMKIHGTRPFRCETCDKGYPERSGLKKHMKKIHGSDLNNMPPKQEEELLEVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -