Dtri042233.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- -
- Assembly
- GCA_949715965.1
- Location
- OX454323.1:62776566-62778596[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-13 2.3e-10 41.4 0.1 1 39 9 47 9 52 0.94
Sequence Information
- Coding Sequence
- ATGCCTCCCAAACGGGCATTGTGGTCAGAAGACGATCTGATCGCAGCTGTTAGAGCAGTACAAAGAGGAACTTTGAGTACGTATAAGGCTGCAGAGAGATATAATGTTCCTAGAAGAACAATCAGAAATCATCTGCAGTCTGGCAGTTTAAAGAAAAGTTTGGGACGTAAACCTATATTAAATGATGAAGAGGAAGCTCAACTTGTGCAAAGGATAATCCGGTATTCTGAAATGGGCTTGCCTGTGACACAAAGAATATTGGGTCGATTGGTGTATAAATATTGTgaccaaaataatataaaacacaattttaatGATGAGAGCAAACGCGCAGGCAAAGACTGGTTCAAAGCGTTCATGAAAAGACACCATGAAATATCCGTAAGAAAAGCGCAATTCATGAACCCAGCTAGAGCCCAAAagctaaataaatttattgttaatgACCATTTTAAAAAACTGAGAGATATCTACGATAAATTTGACTTATATTATCATCCcgagaaaatttataatatggaTGAGAAAGGATGCCGTCTCACTATCCACCACCAGCAAAGTGTTTTGGCCAAAAAACGGGCTAAAAGGGTTCATTTGCAGTCTTCTGAACATGCTGAAAGCGTTACCATCGCAGGATGTGTTAATGCTCTTGGCACAGCCCTACCACCTATGGTCATATTTAAGGGAAAACGTTTGAAAACAGAATTGTACGATAATTTGCCTCAAGGATCTTTAGTAGAAAAATCAGCAAAGGGATACAAAAGCCAGGGACCATGCCTTTTGATATTTGATGGAGCAGCCTGCCATTTAGATCTTTCTATAGTCGATATATCCGATTCACTTGGCATTAATTTGTACTGCCTACCTTCAAACACAACCCATGAATTACAGCCCCTCGACAAAGCCGTATATAGATCATTCGAGTACCACTGGGATGCTGAATTGTTATCATTTTTTGACCAAAACAGAGACAAAAAACTCACTAAAGCACGCTTTAATACCATCCTTTCAAGCGTTTGGTCTAAATGTATGACTCACAGCAATATCACGAGTGGCTTTAAAGCGACTGGCTTGTATCCCTTCAACCCACAGGCCATACCAGAAACAGCTTTTGTCCCTTCTATTTTAACGGAAGCTCCTGCACCAGATGGTGCACAAGAAAACGCACCAGCTCTCGAACATCCTCATGCACAAGCTTCAGAATCAACGCCTGATCGTGATCAAGAAAATATACCACCTATTAATAGTGATCAACAGAAGAGTTCAGAATCTGCTGCTAGTTCACCATCAATTTTGACACCGATTCCAATACCCGATGTCTCGCTTGGAAATATTTCACCTGTTGATTGTCTTCGACCAGCGACTCCAGAACAAACTAAGCAATCACCAGCTATAGCATCAACATCCACAGGTCAGGTCTCAAGAGAATCAATCGTGCAACGCAGCTATTATCTCACAGTTTATGGAACAAGCTCTAGTTCAGATGAATCTGATGATTTACCACTCAGTCGGTTgaaaagaaatgatttttatgatCTTATGCCTACGCCTGTTAAAGTTCAAACATGCACACCGACTGTTAGACGAAAAGCCATTAATTATCGAGGTAAATCACAAAAACAAGTGAGTTGGTACTGTCATGCCTGCAAAGAAGATAGAATGGACGATGCAATGAGGCAATGCTCGCGATGCTCCAAGTGGTACCACGAAGAGTGTGTCGGTTTGACTGCAGAAGATACTGATGACTTTCAATGTCTTGATGGATGCGAATAA
- Protein Sequence
- MPPKRALWSEDDLIAAVRAVQRGTLSTYKAAERYNVPRRTIRNHLQSGSLKKSLGRKPILNDEEEAQLVQRIIRYSEMGLPVTQRILGRLVYKYCDQNNIKHNFNDESKRAGKDWFKAFMKRHHEISVRKAQFMNPARAQKLNKFIVNDHFKKLRDIYDKFDLYYHPEKIYNMDEKGCRLTIHHQQSVLAKKRAKRVHLQSSEHAESVTIAGCVNALGTALPPMVIFKGKRLKTELYDNLPQGSLVEKSAKGYKSQGPCLLIFDGAACHLDLSIVDISDSLGINLYCLPSNTTHELQPLDKAVYRSFEYHWDAELLSFFDQNRDKKLTKARFNTILSSVWSKCMTHSNITSGFKATGLYPFNPQAIPETAFVPSILTEAPAPDGAQENAPALEHPHAQASESTPDRDQENIPPINSDQQKSSESAASSPSILTPIPIPDVSLGNISPVDCLRPATPEQTKQSPAIASTSTGQVSRESIVQRSYYLTVYGTSSSSDESDDLPLSRLKRNDFYDLMPTPVKVQTCTPTVRRKAINYRGKSQKQVSWYCHACKEDRMDDAMRQCSRCSKWYHEECVGLTAEDTDDFQCLDGCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00924530;
- 90% Identity
- iTF_00628166;
- 80% Identity
- -