Basic Information

Gene Symbol
retn
Assembly
GCA_949715965.1
Location
OX454319.1:18792035-18818803[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-22 2.8e-18 67.4 0.0 2 79 31 106 30 107 0.94

Sequence Information

Coding Sequence
ATGCCTGTGgataattttgcatttattaagaAGGAGCCGAACATACAAGAGTATATGACGGAGCTTTACGAGATCAGCGATGACCCCAAACGTAAGGAGTTCCTGGATGACTTGTTTTCGTTTATGCAGAAACGAGGAACGCCAATCAATCGTCTCCCAATTATGGCTAAGTCAGTGTTAGACTTGTATGAGTTGTATAATTTAGTAATTGCCCGCGGTGGTCTGGTCGAtgtgataaataaaaaactatggCAGGAAATAATAAAAGGCCTCCACCTTCCATCCAGTATAACAAGTGCAGCATTCACCCTCAGAACACAGTAA
Protein Sequence
MPVDNFAFIKKEPNIQEYMTELYEISDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01256192;
90% Identity
-
80% Identity
-