Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000005.1:55776475-55778332[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00033 0.039 16.0 0.3 2 23 190 211 189 211 0.97

2 14 0.049 5.7 9.2 0.3 1 20 217 236 217 239 0.94

3 14 0.016 1.9 10.7 6.1 1 23 245 267 245 267 0.95

4 14 4.9e-06 0.00058 21.8 3.1 1 23 299 321 299 321 0.98

5 14 4.5e-08 5.3e-06 28.2 2.5 2 23 328 349 327 349 0.97

6 14 2.3e-05 0.0027 19.7 4.0 1 23 354 376 354 376 0.98

7 14 8.5e-08 9.9e-06 27.3 2.4 1 23 381 403 381 403 0.98

8 14 4.5e-07 5.3e-05 25.1 3.1 2 23 410 431 409 431 0.97

9 14 0.00016 0.019 17.0 1.3 2 23 437 458 436 458 0.97

10 14 1.1e-06 0.00013 23.8 2.0 2 23 465 486 464 486 0.97

11 14 2.2e-07 2.5e-05 26.1 1.6 1 23 491 513 491 513 0.98

12 14 2e-05 0.0024 19.8 2.9 1 23 518 540 518 540 0.98

13 14 1.2e-05 0.0014 20.5 2.9 1 23 546 568 546 568 0.99

14 14 3.9e-06 0.00045 22.1 3.2 2 23 574 595 573 595 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00033	0.039	16.0	0.3	2	23	190	211	189	211	0.97
2	14	0.049	5.7	9.2	0.3	1	20	217	236	217	239	0.94
3	14	0.016	1.9	10.7	6.1	1	23	245	267	245	267	0.95
4	14	4.9e-06	0.00058	21.8	3.1	1	23	299	321	299	321	0.98
5	14	4.5e-08	5.3e-06	28.2	2.5	2	23	328	349	327	349	0.97
6	14	2.3e-05	0.0027	19.7	4.0	1	23	354	376	354	376	0.98
7	14	8.5e-08	9.9e-06	27.3	2.4	1	23	381	403	381	403	0.98
8	14	4.5e-07	5.3e-05	25.1	3.1	2	23	410	431	409	431	0.97
9	14	0.00016	0.019	17.0	1.3	2	23	437	458	436	458	0.97
10	14	1.1e-06	0.00013	23.8	2.0	2	23	465	486	464	486	0.97
11	14	2.2e-07	2.5e-05	26.1	1.6	1	23	491	513	491	513	0.98
12	14	2e-05	0.0024	19.8	2.9	1	23	518	540	518	540	0.98
13	14	1.2e-05	0.0014	20.5	2.9	1	23	546	568	546	568	0.99
14	14	3.9e-06	0.00045	22.1	3.2	2	23	574	595	573	595	0.97

Sequence Information

Coding Sequence: ATGTCAggtgaaattatatttaaggaGGAAAGCGGGTTAAATGACCCTTCAGCTGATACTGTATTTGATTTAGCCAACCGCTGTAGAACATGTTTACAACTTGAGTATTCCTTGACATCAACAAATACCTCAGATAGCGACTCCATAAAATTCtgtgataaattagcggcctgCGTATCAGGAATGAGGTGGGCAAAGGAGCGTGTGCCTTCTTTTATTTGCGGAATATGTATAGAGAAACTAAGAATTGCGTATGATTTCCAAACAGTTTGTTTACAATCAGATCAAACGTTCCAATTACAAGGGGAAGCGAATAAAATACAAAGTTGTAGGAGCGCAACTTTGGATTCTACAAGAAGTAGCTTAGACGAATACGATAAAACATTAGgaaatgttattttaagtgtAAAATGTGAGGAAACACAACTGCAGTATACCCCAGATACTTCGGCGGCAGCACAATTGGACACTATACGGATACTAGATGATCCTCGAAAACACGGCTGCCAGCTCTGTGGAAAAGAATTATGTGAACATATTCAAAGGCGTACAGATGAGACGTGTTTGCAATGTTTGACATGCTTTACACGGTTTACGACAACAGCTGAGTTAATTGCGCATATGCAAATTCATACTGGGGAGAAGTGGTATGCTTGCAATTTGTGCGAGGAGAGGTATATAAATGAATCCGATTTCTTAATGCATATACATCCGCATACAGAAGAGATACCATTTGCATGTAGTTGCtgtgataaaaagtttattAGCAAATGTCTGTTGAACTCCCActtaaaaacacacaaaaaaaataccGGCGATAAACTTTCACAATGTCAAATCAGTAACAAATCATACAAAACATCGCAGCACATGAATACACACGCTGGAAAGAAGTTTTCGTGTAAATTATGCGATAAAAAGTTTGTGTACTTTTCCTCTTTAAATATGCATATGAGAAGACATACCGGTGATAAACTTTTACGATGTGAAATCTGTAACAAATCATACACACAACCTGATCATCTCACACGGCACATGAAGacacatactggagagaagttttcctgcaaattatgtgataaaaagtttgcGCACTCTTCCTCTGTAAATATgcatatgaaaaaacatactggagaaacgttttcctgtaaattatgcgaTAAAAGCTTTTCAAGGTCTACCTCTTTAAATGCGcatatgaaaagacatactGGTGATAAACTTCTTCGATGTCCAAATTGTAACAAATCGTATACACAATCCTCTCACCTTACAGAGCACATGCAGAGACATAACCGAGAGAAGCTTTCCTGCAAATTATGCGATAAAAAGTTCACATGGCGTTCCGGCTTAAGCGAACATATGAGAAGACATACTGGCGATAAACTTTTACAATGTCAAATCTGTAATAAATCATACACACACTCCGCTCTTCTCACACAGCACATGATGACACATACCGGAGAGaagttttcttgtaaattatgtgataaaacgTTTGCATACTCTTCCTCTTTAAATCTGCACATGAGAAGTCATACTGGAGagcagttttcctgtaaattgtGTGAAAAGAAATTTAGATATTATTCTCAATTGTCACTTCACATGCGGGAACACACGGGAAAACAACCATATAAGTGCACTCTCTGCAACAAAGTATGCAGCTATGCTCGAGATTTGCGAATACATATGATGAAACATACCGGTGAGAAATTGACATGTTCAACATGCGATAAAAAGTTTTCTAGCAGACGTATGTTGAACCGGCACTTAAAAACTCATGCCGGTGAAAATTGCTCGTAA
Protein Sequence: MSGEIIFKEESGLNDPSADTVFDLANRCRTCLQLEYSLTSTNTSDSDSIKFCDKLAACVSGMRWAKERVPSFICGICIEKLRIAYDFQTVCLQSDQTFQLQGEANKIQSCRSATLDSTRSSLDEYDKTLGNVILSVKCEETQLQYTPDTSAAAQLDTIRILDDPRKHGCQLCGKELCEHIQRRTDETCLQCLTCFTRFTTTAELIAHMQIHTGEKWYACNLCEERYINESDFLMHIHPHTEEIPFACSCCDKKFISKCLLNSHLKTHKKNTGDKLSQCQISNKSYKTSQHMNTHAGKKFSCKLCDKKFVYFSSLNMHMRRHTGDKLLRCEICNKSYTQPDHLTRHMKTHTGEKFSCKLCDKKFAHSSSVNMHMKKHTGETFSCKLCDKSFSRSTSLNAHMKRHTGDKLLRCPNCNKSYTQSSHLTEHMQRHNREKLSCKLCDKKFTWRSGLSEHMRRHTGDKLLQCQICNKSYTHSALLTQHMMTHTGEKFSCKLCDKTFAYSSSLNLHMRSHTGEQFSCKLCEKKFRYYSQLSLHMREHTGKQPYKCTLCNKVCSYARDLRIHMMKHTGEKLTCSTCDKKFSSRRMLNRHLKTHAGENCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00626442;
90% Identity: -
80% Identity: -