Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000003.1:3495857-3497847[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1e-05 0.0012 20.8 2.4 5 23 313 331 312 331 0.97

2 12 4.7e-07 5.5e-05 25.0 0.8 1 23 336 358 336 358 0.97

3 12 1.3e-06 0.00015 23.6 3.4 1 23 363 385 363 385 0.98

4 12 1.2e-07 1.4e-05 26.8 0.8 1 23 390 412 390 412 0.98

5 12 0.00047 0.055 15.6 3.5 2 23 418 439 417 439 0.96

6 12 1.2e-05 0.0014 20.5 0.5 1 23 444 466 444 466 0.98

7 12 1.8e-05 0.0021 20.0 0.7 1 23 471 493 471 493 0.98

8 12 4.8e-07 5.6e-05 25.0 2.1 1 23 498 520 498 520 0.98

9 12 1.1e-06 0.00013 23.8 1.8 1 23 525 547 525 547 0.98

10 12 2e-06 0.00024 23.0 2.8 1 23 552 574 552 574 0.98

11 12 3.2e-06 0.00037 22.4 1.9 1 23 579 601 579 601 0.98

12 12 1.7e-05 0.002 20.1 3.5 1 23 606 628 606 628 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1e-05	0.0012	20.8	2.4	5	23	313	331	312	331	0.97
2	12	4.7e-07	5.5e-05	25.0	0.8	1	23	336	358	336	358	0.97
3	12	1.3e-06	0.00015	23.6	3.4	1	23	363	385	363	385	0.98
4	12	1.2e-07	1.4e-05	26.8	0.8	1	23	390	412	390	412	0.98
5	12	0.00047	0.055	15.6	3.5	2	23	418	439	417	439	0.96
6	12	1.2e-05	0.0014	20.5	0.5	1	23	444	466	444	466	0.98
7	12	1.8e-05	0.0021	20.0	0.7	1	23	471	493	471	493	0.98
8	12	4.8e-07	5.6e-05	25.0	2.1	1	23	498	520	498	520	0.98
9	12	1.1e-06	0.00013	23.8	1.8	1	23	525	547	525	547	0.98
10	12	2e-06	0.00024	23.0	2.8	1	23	552	574	552	574	0.98
11	12	3.2e-06	0.00037	22.4	1.9	1	23	579	601	579	601	0.98
12	12	1.7e-05	0.002	20.1	3.5	1	23	606	628	606	628	0.98

Sequence Information

Coding Sequence: ATGTCGATTGAAATTCTATTTAAGGAAGAAGGCGATCTAAATGATCCTTCAACCGATACTGTTTATGATTTAGCTGGCTGCTGCAGAACATGTTTGCAACATGAATGTTCTTTGACTCCAACAAATTCTTGGGATAGCGACTCCATAAAATTCTGTGACAAATTAGCCTGTTGTGTATCAGGAGTGACATGGGCAAAGGAGGATGTGCCTTCTTTTATTTGTGGACTATGTATAGAGAAACTAAGAATTGCCTACGATTTCCAAACAATTTGTTTACAATCAGATCAGAcactacaattacaaagggaAGCAAGTGAAATACGAAGTTCTAGAAGTGTAATTCTGGATTCTACGACAACTGACTTAGCTGAATATGATGAAACaatagggaatgttattttaaatgtaaaagcaGAGGAAATACGGAGTCCTAGAAGTGTAACTGCAGATCTTGTGACAACATCTGATCAAGCTGAATATGACAAAACAATAGAGAATGTTATTTTAAGCATAAAATCAGAGGAAACGCAAATCCACCAACAAACACTTCAATTACAAAAGGAAGAAAGTGAAATACGAAGTTCTAGAGGTGTAACTCTGGATCCTATGACAACAAATGAATTGGCTGAACGTGACAAAACAATAGAGAATGTTATTTTAAGCATAAAATCGGAGGAAACGCAAATCCACCAACAAACACTTCAATTACAAAAGGAAGAAAGTGTAATACGAAGTTCTACAGGTGTAACTCTGGATCCTATGACAACAAATGAATTGGCTGAACGTGACAAAACAATagagaatgttattttaaatctaaaagtaGAGGAAATGCAAACCCCTCCTTTACCTCACTGTGCCCCAGTTACCACTGCTGCAGCACAATTAGAAGTTATGCAGACATCAGACGATCTGCTAGTGCACTGGCGAGGTCGGATCTGTAACAAATCATACACAAATTCTTCTCACCTTACACGGCACATAAAGACGCATACCAAAAAGAAGTTtgcctgtaaattatgtgataaaaagttcacaGACCTTTCCGCTTTAaatgtacatatgaaaaaacatactgGAAAGAGGTTTTCCTGTAATTTATGCGATAAAAAGTTCACACGGCGGTACTCTTTAAgtatacatatgaaaaaacatactggagagaagttttcctgtaaattatgtgatagaAACTTCACAAACCCTGCCGCTttaaatagacatatgaaaacACATACTGGAGAAGAGCTTTgttgtaaattatgtgataaaaagtttattCTCTCTAGGTCTTTAAGTGcacatatgaaaaaacatactaatgagaagttttcctgtaaattatgtgataaaaagttctCATGGCCTTCCGGTTTAAATGCACATATGAAAAGCCATgctggagagaagttttcctgtaagtTATGTGATAAAGAGTTCGCTTTGTCTGAGACTTTAGGTAGACATATGAAAacacatactggagagaagttttcctgtaaattatgtgataaaaagtttacaCAGTCTTCCtctttatatgtacatatgaagatacatactggagagaagttttcctgtaaattatgtgataaaatgTTCACACAGTCTGCCtctttgtatgtacatatgaaaaaacatactggagagaagttttcctgtaaattatgtgacaAAAAGTACACACAATCTTCCTCTTTAAGGCTACATATGACAACACATACAGGAGAGaagttttcttgtaaattatgtgataaaaagttcacaGCGCCTGCCTCTTTGTGTGCACATATGAAGACACATACTGGAGATatgttttcctgtaaattatgtaatAGAATGTTTTCATATCATTCCTCTTTAAGTGTACACATGAAAGTACATACCGCAGAGAAGTTTTCCGGTAAATTATCTAATAAGTTTACAGAGTCTTTAACTTAA
Protein Sequence: MSIEILFKEEGDLNDPSTDTVYDLAGCCRTCLQHECSLTPTNSWDSDSIKFCDKLACCVSGVTWAKEDVPSFICGLCIEKLRIAYDFQTICLQSDQTLQLQREASEIRSSRSVILDSTTTDLAEYDETIGNVILNVKAEEIRSPRSVTADLVTTSDQAEYDKTIENVILSIKSEETQIHQQTLQLQKEESEIRSSRGVTLDPMTTNELAERDKTIENVILSIKSEETQIHQQTLQLQKEESVIRSSTGVTLDPMTTNELAERDKTIENVILNLKVEEMQTPPLPHCAPVTTAAAQLEVMQTSDDLLVHWRGRICNKSYTNSSHLTRHIKTHTKKKFACKLCDKKFTDLSALNVHMKKHTGKRFSCNLCDKKFTRRYSLSIHMKKHTGEKFSCKLCDRNFTNPAALNRHMKTHTGEELCCKLCDKKFILSRSLSAHMKKHTNEKFSCKLCDKKFSWPSGLNAHMKSHAGEKFSCKLCDKEFALSETLGRHMKTHTGEKFSCKLCDKKFTQSSSLYVHMKIHTGEKFSCKLCDKMFTQSASLYVHMKKHTGEKFSCKLCDKKYTQSSSLRLHMTTHTGEKFSCKLCDKKFTAPASLCAHMKTHTGDMFSCKLCNRMFSYHSSLSVHMKVHTAEKFSGKLSNKFTESLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00626381;
90% Identity: iTF_00626381;
80% Identity: -