Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000003.1:2446885-2448649[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.1e-05 0.0013 20.7 0.4 1 23 194 216 194 216 0.99

2 14 0.01 1.2 11.3 2.4 1 23 222 244 222 244 0.97

3 14 0.00021 0.025 16.6 1.3 3 23 252 272 251 272 0.97

4 14 1.2e-05 0.0015 20.5 0.4 2 23 278 299 277 299 0.97

5 14 8e-07 9.3e-05 24.3 3.7 1 23 304 326 304 326 0.98

6 14 1e-07 1.2e-05 27.1 1.1 1 23 331 353 331 353 0.98

7 14 1.1e-06 0.00013 23.8 1.5 1 23 358 380 358 380 0.98

8 14 1.5e-05 0.0017 20.3 3.2 1 23 385 407 385 407 0.97

9 14 0.00075 0.087 14.9 0.9 2 23 413 434 412 434 0.97

10 14 0.00011 0.013 17.5 0.7 2 23 440 461 439 461 0.97

11 14 9.8e-05 0.011 17.7 1.1 1 23 466 488 466 488 0.98

12 14 1.6e-08 1.9e-06 29.6 2.1 1 23 493 515 493 515 0.98

13 14 0.0013 0.15 14.2 2.4 1 23 520 542 520 542 0.98

14 14 3.3e-07 3.9e-05 25.5 2.8 1 23 547 569 547 569 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.1e-05	0.0013	20.7	0.4	1	23	194	216	194	216	0.99
2	14	0.01	1.2	11.3	2.4	1	23	222	244	222	244	0.97
3	14	0.00021	0.025	16.6	1.3	3	23	252	272	251	272	0.97
4	14	1.2e-05	0.0015	20.5	0.4	2	23	278	299	277	299	0.97
5	14	8e-07	9.3e-05	24.3	3.7	1	23	304	326	304	326	0.98
6	14	1e-07	1.2e-05	27.1	1.1	1	23	331	353	331	353	0.98
7	14	1.1e-06	0.00013	23.8	1.5	1	23	358	380	358	380	0.98
8	14	1.5e-05	0.0017	20.3	3.2	1	23	385	407	385	407	0.97
9	14	0.00075	0.087	14.9	0.9	2	23	413	434	412	434	0.97
10	14	0.00011	0.013	17.5	0.7	2	23	440	461	439	461	0.97
11	14	9.8e-05	0.011	17.7	1.1	1	23	466	488	466	488	0.98
12	14	1.6e-08	1.9e-06	29.6	2.1	1	23	493	515	493	515	0.98
13	14	0.0013	0.15	14.2	2.4	1	23	520	542	520	542	0.98
14	14	3.3e-07	3.9e-05	25.5	2.8	1	23	547	569	547	569	0.98

Sequence Information

Coding Sequence: ATGTCGATTGAAATCCTATTAGAGGAAGAAAGCAATCTAAATGACTGTTCAACCGATACTGTATTTGATTTAGCTGAGTGCTGTAGAACATGTTTACGAGCTGAGTGTTCCTTGACACCAACGAATTCCTCGGATAGCGACTCGATAAAATTCAGCGACAAATTAGCAGCCTGCGTATCAGGAATGAAATGGGCAAAAGAGGGTGTACCGTCTTTTATTTGTGGACTATGTATAGAAAAACTAAGAATTGCCTACGATTTCCAAACAGTTTGTTTGGAATCAGATCAAGCACTTCAATTAAAACGAGAAGCAAGTGAAATACGAAGTCCTAGAAGTGTAACTCCGAATCCTACGACAACCACTGACCTAGCTGAACGTGATGAAACAATAGAGAATGTTATTTTAAGTGTAAAAGCGGAGGATACGCAAATCCAGCCTTTACCTCAGTGTACCCCACTTACCTCAGCTGCAGCACAATTAGAAGCTATGCAGACATCAGATAATCATCGTGAGGATGGCTGCCAACTTTGTGGCAAAGAATCATGTGAACACAGTCCTAGACGCACAGATGAGAAGTGTTTTCAATGTTCGGTATGCCTTAAACAGTTTACGATGGCAGCCGAGCTAACTACGCACATGCGAATTCATACCGAGGAAAAGCCGCATTCTTGTAATTTATGCGAGAATAGGTATATTACTAAAGCCGGCTTGCTAGTGCATATGTGTTCACATACAGAAGAAACAGCAGTTGCATGTAGTTACTgcgataaaaaatttacttcaaCATATCGGCTAAACTCTCACTTGACAATTCATACTGGCAAACTTTGGCGATGTCAGATCTGCAGCAGATCATACACGGCATCTTCTGGCCTCGCACGGCACATGAAAACACATACCGGAGAGACGTTTTCCTGTAAGTTGTGTGATAAGAAGTTCACGCAGTCTTACACTTTAAGGATACATATGAAgaaacatactggagagaagttttcctgtaaattatgcgaTAAACAGTTCACACGGCCAGCCTCTTTAAATGTACATATGAGAAGACATACTGGAgtgaagttttcctgtaaattatgcgaTAAAAAGTTCACACAGCCATACCCTTTAACTGTACATATGAAGAAACATACTGGGGAGAAGTTCTTCTGTAAATTATGCGATAAACAGTTCATACGGCGAACCTCTTTAAATCTACATATGAAAAGACATTCTGGAGTGAAgctttcctgtaaattatgcgaTAAACAGTTTACTTGGTCTGCTTCTTTAAGTGAACATATGAAgaaacatactggagagaagctTTCCTGTAAACTATGTGATGAACAGTTTACTTGGTCTAGTTCTTTAAGGGTACATATGAAAACACATACcggagagaagttttcctgtaaagtATGCGATCAACAGTTTACTTGGTCTAGTTCTTTAAGCGCACATATGAAGAAACATACTGGAGaaaagttttcctgtaaattatgtgataaaaagttcacGCGGCCATCCACATTAACTGTACATATGAGAACccatactggagagaagttttcctgtaaattatgtgataaacaATATATTTGGTCCGAATCTTTTAAGAGacatatgaaaagacatactggagaaaagttttcctgtaaatcatgtgataaaaagttcacGCGGCCATCCACATTAactgtacatatgaaaaaacataccggatag
Protein Sequence: MSIEILLEEESNLNDCSTDTVFDLAECCRTCLRAECSLTPTNSSDSDSIKFSDKLAACVSGMKWAKEGVPSFICGLCIEKLRIAYDFQTVCLESDQALQLKREASEIRSPRSVTPNPTTTTDLAERDETIENVILSVKAEDTQIQPLPQCTPLTSAAAQLEAMQTSDNHREDGCQLCGKESCEHSPRRTDEKCFQCSVCLKQFTMAAELTTHMRIHTEEKPHSCNLCENRYITKAGLLVHMCSHTEETAVACSYCDKKFTSTYRLNSHLTIHTGKLWRCQICSRSYTASSGLARHMKTHTGETFSCKLCDKKFTQSYTLRIHMKKHTGEKFSCKLCDKQFTRPASLNVHMRRHTGVKFSCKLCDKKFTQPYPLTVHMKKHTGEKFFCKLCDKQFIRRTSLNLHMKRHSGVKLSCKLCDKQFTWSASLSEHMKKHTGEKLSCKLCDEQFTWSSSLRVHMKTHTGEKFSCKVCDQQFTWSSSLSAHMKKHTGEKFSCKLCDKKFTRPSTLTVHMRTHTGEKFSCKLCDKQYIWSESFKRHMKRHTGEKFSCKSCDKKFTRPSTLTVHMKKHTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -