Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000003.1:2244908-2246815[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.8 2.1e+02 4.3 0.4 5 14 108 117 107 118 0.87

2 15 0.0013 0.16 14.1 2.0 3 23 134 154 133 154 0.97

3 15 6.3e-06 0.00074 21.4 3.7 1 23 160 182 160 182 0.96

4 15 9.9e-06 0.0012 20.8 0.7 1 23 188 210 188 210 0.98

5 15 4.6e-06 0.00053 21.9 1.4 1 23 216 238 216 238 0.97

6 15 6.8e-06 0.0008 21.3 4.4 1 23 244 266 244 266 0.98

7 15 4.1e-06 0.00048 22.0 0.8 1 23 272 294 272 294 0.99

8 15 1e-06 0.00012 24.0 0.5 1 23 300 322 300 322 0.99

9 15 3.7e-05 0.0043 19.0 2.0 1 23 328 350 328 350 0.97

10 15 4.8e-06 0.00056 21.8 0.3 1 23 356 378 356 378 0.99

11 15 9e-05 0.01 17.8 0.7 1 23 384 406 384 406 0.98

12 15 1.6e-07 1.9e-05 26.5 1.8 1 23 412 434 412 434 0.99

13 15 9.9e-05 0.012 17.7 4.4 1 23 440 462 440 462 0.98

14 15 5.7e-06 0.00067 21.6 0.5 1 23 468 490 468 490 0.98

15 15 0.0061 0.71 12.1 0.3 1 23 496 518 496 518 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.8	2.1e+02	4.3	0.4	5	14	108	117	107	118	0.87
2	15	0.0013	0.16	14.1	2.0	3	23	134	154	133	154	0.97
3	15	6.3e-06	0.00074	21.4	3.7	1	23	160	182	160	182	0.96
4	15	9.9e-06	0.0012	20.8	0.7	1	23	188	210	188	210	0.98
5	15	4.6e-06	0.00053	21.9	1.4	1	23	216	238	216	238	0.97
6	15	6.8e-06	0.0008	21.3	4.4	1	23	244	266	244	266	0.98
7	15	4.1e-06	0.00048	22.0	0.8	1	23	272	294	272	294	0.99
8	15	1e-06	0.00012	24.0	0.5	1	23	300	322	300	322	0.99
9	15	3.7e-05	0.0043	19.0	2.0	1	23	328	350	328	350	0.97
10	15	4.8e-06	0.00056	21.8	0.3	1	23	356	378	356	378	0.99
11	15	9e-05	0.01	17.8	0.7	1	23	384	406	384	406	0.98
12	15	1.6e-07	1.9e-05	26.5	1.8	1	23	412	434	412	434	0.99
13	15	9.9e-05	0.012	17.7	4.4	1	23	440	462	440	462	0.98
14	15	5.7e-06	0.00067	21.6	0.5	1	23	468	490	468	490	0.98
15	15	0.0061	0.71	12.1	0.3	1	23	496	518	496	518	0.97

Sequence Information

Coding Sequence: ATGGCTACAGAATATGATAAGTTGCATGGACATTACGATAATAAATGTGGAGAATATAATAGTGACgcagacattaaattagaaaattttatagtTCAAGCAGAAAATGTTCTTGATACAAAAGCAGGAATACCTTTGTTAAGCGACCACAATGTAACACAAGGTGAAGAATCTAATAATGATCCGGAcgttaaattagaagattttgtaattcaaacgggagattttcgtgattcaaaagcaggaatatcGTTGATAAGTGATCACGACGTAGCAGAAGGTGCCTTATTAGAacatattaaatttgaaaatttgaacgaCCAATGCGATAAAagctttaaacagaaacataAACCAAACGCTCAAAAGGTCTCTCATAAGCTCGACAAGAATGTCTTCTGTCCTAAATGTGGAAAACCGTTCGAGAAGAAGAAACTATATCATCATATTAGAAGCGTGCATTTGCCCAGGAAGATTCACATGTGTAGATTTTGCGGGCGGACGTTTCGTCGCAAGAGCGATCTAACGGTACATACTAGAggacacaccggtgaaaagccctatgcttgcgaaatttgtaaaaagtcatatTCTGCGAGGAATGGATTGACCAAACATATTAGaaaacacaccggtgaaaagccttttgcTTGCAAGATttgtaaaaagttattttctacGAAGGATGTACTGAAGAAACATATGAGAGCACACACcggtgaaaggccttttacttgcgaattttgtaaaaagtcatttgcTGAGAAGAGTCACCTAACGACTCATATTCAAAAACACACCGGTGAAatgccttttacttgcgaaatttgtaacaaatcattttcttggaagagcACATTGGCGACTCATATTCAAACCCACACGGGTGAAatgccttttacttgcgaaatttgtagcaaatcattttcttggaagagtGCATTGACGGCTCATATTCGAACACATAcgggtgaaaagccttttacttgtgaaatttgtaaaaaatcattttgtcaGAAGACTGTATTAGCGACTCACATTCAAGCACATACcggtgaaaggccttttacttgcgagatttgtacaaagtcattttcttggaagagtGCATTGGCGGCCCATATTAAAACTCACAcgggtgaaaagccttttacgtGCGAGgtcTGTAACAagtcattttcttggaagaatAGACTGATGGCTCATATTCAAACACACACGAATGAAAAATCTTTTACTTGCGAGGTCTGCAGCAAGTCATTTGCTCAAAAGAGTAACCTGATGAATCATACGAAAACACACATGgatgaaaagccttttacttgcgagctGTGTAAACAGTCGTATTGTACGAAGGATAGACtgagaagacatattaaaatacacaccaGCGagaagccttttacttgcgaagtttgtaaaacgtcatttgtcacttcTGCACGGCTAAAAAGACATATGGCAGTGCATATGGGTGATTGCCCTTATTCCTGTGAGTTGTGTTCCGCTAAATTTAAGAGTCCAGAAAGTGTAGGACGGCATGTGAAGCAGCATTTTAAAAAGGAAGTCTAA
Protein Sequence: MATEYDKLHGHYDNKCGEYNSDADIKLENFIVQAENVLDTKAGIPLLSDHNVTQGEESNNDPDVKLEDFVIQTGDFRDSKAGISLISDHDVAEGALLEHIKFENLNDQCDKSFKQKHKPNAQKVSHKLDKNVFCPKCGKPFEKKKLYHHIRSVHLPRKIHMCRFCGRTFRRKSDLTVHTRGHTGEKPYACEICKKSYSARNGLTKHIRKHTGEKPFACKICKKLFSTKDVLKKHMRAHTGERPFTCEFCKKSFAEKSHLTTHIQKHTGEMPFTCEICNKSFSWKSTLATHIQTHTGEMPFTCEICSKSFSWKSALTAHIRTHTGEKPFTCEICKKSFCQKTVLATHIQAHTGERPFTCEICTKSFSWKSALAAHIKTHTGEKPFTCEVCNKSFSWKNRLMAHIQTHTNEKSFTCEVCSKSFAQKSNLMNHTKTHMDEKPFTCELCKQSYCTKDRLRRHIKIHTSEKPFTCEVCKTSFVTSARLKRHMAVHMGDCPYSCELCSAKFKSPESVGRHVKQHFKKEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00626374;
90% Identity: iTF_00626374;
80% Identity: -