Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000003.1:3489110-3491046[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.6e-05 0.0042 19.1 0.7 1 23 193 215 193 215 0.99

2 16 0.00094 0.11 14.6 0.6 1 23 221 243 221 243 0.96

3 16 0.0035 0.41 12.8 4.5 1 23 249 271 249 271 0.94

4 16 3.3e-05 0.0039 19.2 4.3 2 23 278 299 277 299 0.97

5 16 2.6e-05 0.003 19.5 1.0 1 23 304 326 304 326 0.98

6 16 1.6e-07 1.9e-05 26.4 1.9 1 23 331 353 331 353 0.98

7 16 3.9e-08 4.6e-06 28.4 1.0 1 23 358 380 358 380 0.98

8 16 2.9e-06 0.00034 22.5 1.2 1 23 385 407 385 407 0.98

9 16 1.7e-06 0.0002 23.2 2.8 1 23 412 434 412 434 0.98

10 16 8.7e-05 0.01 17.9 1.8 1 23 439 461 439 461 0.98

11 16 1.1e-07 1.3e-05 26.9 1.9 1 23 466 488 466 488 0.98

12 16 2.2e-06 0.00026 22.9 2.1 1 23 493 515 493 515 0.98

13 16 4e-08 4.7e-06 28.4 1.3 1 23 520 542 520 542 0.98

14 16 1.3e-06 0.00016 23.6 3.8 1 23 547 569 547 569 0.98

15 16 6.3e-06 0.00073 21.5 1.5 1 23 574 596 574 596 0.98

16 16 6.8e-05 0.008 18.2 3.6 1 23 601 623 601 623 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.6e-05	0.0042	19.1	0.7	1	23	193	215	193	215	0.99
2	16	0.00094	0.11	14.6	0.6	1	23	221	243	221	243	0.96
3	16	0.0035	0.41	12.8	4.5	1	23	249	271	249	271	0.94
4	16	3.3e-05	0.0039	19.2	4.3	2	23	278	299	277	299	0.97
5	16	2.6e-05	0.003	19.5	1.0	1	23	304	326	304	326	0.98
6	16	1.6e-07	1.9e-05	26.4	1.9	1	23	331	353	331	353	0.98
7	16	3.9e-08	4.6e-06	28.4	1.0	1	23	358	380	358	380	0.98
8	16	2.9e-06	0.00034	22.5	1.2	1	23	385	407	385	407	0.98
9	16	1.7e-06	0.0002	23.2	2.8	1	23	412	434	412	434	0.98
10	16	8.7e-05	0.01	17.9	1.8	1	23	439	461	439	461	0.98
11	16	1.1e-07	1.3e-05	26.9	1.9	1	23	466	488	466	488	0.98
12	16	2.2e-06	0.00026	22.9	2.1	1	23	493	515	493	515	0.98
13	16	4e-08	4.7e-06	28.4	1.3	1	23	520	542	520	542	0.98
14	16	1.3e-06	0.00016	23.6	3.8	1	23	547	569	547	569	0.98
15	16	6.3e-06	0.00073	21.5	1.5	1	23	574	596	574	596	0.98
16	16	6.8e-05	0.008	18.2	3.6	1	23	601	623	601	623	0.97

Sequence Information

Coding Sequence: ATGTCGATTGAAATTCTAATCAAGGAAGAAAGCGATCTAAATGACCCTTCAATGGGTACCGTATTTGATTTGGCTGAGTGCTGTAGAACATGTTTACGACATGGGTGTTCCTTGACACCAACAAATTTCCCGGATAGCGACTCCATAAAATTCTGTGACAAATTAGCAGCCTCCATATCAGGAGTGaaatgggCAAAGGATCGCGttccttcttttatttgtggaacatgtatagaaaaactaaaaattgccTACGATTTCCAAACACTTTGTTTACAATCAGATCAAACACTTCAATTACAAGGGGAAGCAAGTGAAATACGGAGTTCTAGAAGTGTAACTCGGGATCTTAGGACAAAAACTGACTTAGCTGAATATGATAAAACaatagggaatgttattttaaGTGTAAAAGCAGAGGAAACGCAAATCCAGCCTTTACCCCAATGTACCCCAGTTGTCGCTGCAGCACAATTAGAAGCTATGCAGACAATAGATACCCCTCGTAAGGATGACTGCCAGGTTTGTGGAAAACAATTATGCGAACATATTCAAAGACCCAAAGGCAAGAAGTGTTTTCAATGTTCGGTATGCCTTAAACAGTTTACAATGACAGCTGAGCTAACTAAACATATACGAGTTCATACCGAGGAAAAACTGCATGCTTGTAATGTTTGCGAGAATAGGTATATTAATAAAATCGACTTGCTAGTGCATATGCGTTCACATGCAGAACAAAGAACATTTGCATGTAGTTATTGTCATAAACAGTTTACTAGAAAATATCTGCTGAATTTCCACTTAGATTCACATTGTGGTAATAAACTTTGGCGATGTCGGATCTGTAACATATCATACACACAATTTTCCCACTTTACACGGCACATGAAGACACATACTAGaaagaagttttcctgtaagttatgtgataaaaagtttactTGGCCTGCCTCTTTAagagtacatatgaaaaaacatactggagagacattttactgtaaattatgtgataaaaagttcgCACAGTCTTCCTCTTTAAATGCacatatgaaaagacatactggagagaagttcTCCTGTGAATTATGTGATAAAGCGTTCACTCGGTCTGACTCTTTAAGGGTACATATGAGaaaacatactggagagaagttttcttgtgaattatgtgataaaaagttcacaCAGCCTTTCCCTTTAAAACTACATATGAAAacacatactggagagaagttctcctgtaaattatgtgataaaaagttcacaCTGTCTTCTTCTTTAagagtacatatgaaaaaacatactggagagaagttcTCTTGCAAATTGTGTAATAAAACGTACACACTGCCTCTCACTTTAagagtacatatgaaaaaacatacaggagagaagttttcctgtaaattatgtgataaaaagtttacaGATCCTTCCACCTTAagagtacatatgaaaaaacatactggagagaagttttctTGTGAATTATGCGATGAAAAGTTCACACGGTCTTTTTCTTTAAGACTACACATGAAAacacatactggagagaagttcccctgtaaattatgtgataaaacgTTCACTCGGTCTGACTCTTTACGGGTACATATAAGAAAACATACTGGCGAGaagttttcttgtaaattatgtgataaaaagttcacaCAATCTTTCTCTTTGAGACTACATATGAAAacacatactggagagaagttctcctgtaaattatgtgataaaacgTATACACAGCCTTTTCCCTTaaaagtacatatgaaaaaacatactggagagaagtttttctgtaaattatgtgataaaaagtgttCAGACCGTACCGATTTAGATGCACATATGAAAACACATACTGGCGATAAACTCTGA
Protein Sequence: MSIEILIKEESDLNDPSMGTVFDLAECCRTCLRHGCSLTPTNFPDSDSIKFCDKLAASISGVKWAKDRVPSFICGTCIEKLKIAYDFQTLCLQSDQTLQLQGEASEIRSSRSVTRDLRTKTDLAEYDKTIGNVILSVKAEETQIQPLPQCTPVVAAAQLEAMQTIDTPRKDDCQVCGKQLCEHIQRPKGKKCFQCSVCLKQFTMTAELTKHIRVHTEEKLHACNVCENRYINKIDLLVHMRSHAEQRTFACSYCHKQFTRKYLLNFHLDSHCGNKLWRCRICNISYTQFSHFTRHMKTHTRKKFSCKLCDKKFTWPASLRVHMKKHTGETFYCKLCDKKFAQSSSLNAHMKRHTGEKFSCELCDKAFTRSDSLRVHMRKHTGEKFSCELCDKKFTQPFPLKLHMKTHTGEKFSCKLCDKKFTLSSSLRVHMKKHTGEKFSCKLCNKTYTLPLTLRVHMKKHTGEKFSCKLCDKKFTDPSTLRVHMKKHTGEKFSCELCDEKFTRSFSLRLHMKTHTGEKFPCKLCDKTFTRSDSLRVHIRKHTGEKFSCKLCDKKFTQSFSLRLHMKTHTGEKFSCKLCDKTYTQPFPLKVHMKKHTGEKFFCKLCDKKCSDRTDLDAHMKTHTGDKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -