Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000021.1:1360340-1363724[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.7e-05 0.0031 19.5 1.7 1 23 33 56 33 56 0.97

2 19 4.5e-05 0.0052 18.8 0.9 1 23 61 83 61 83 0.99

3 19 0.038 4.4 9.6 0.4 1 23 90 112 90 112 0.98

4 19 3.9e-06 0.00045 22.1 2.1 1 23 118 140 118 140 0.99

5 19 1.1e-05 0.0013 20.7 3.5 1 23 146 168 146 168 0.98

6 19 0.00035 0.04 16.0 0.5 1 23 177 199 177 199 0.98

7 19 2.5e-05 0.0029 19.6 4.3 1 23 205 227 205 227 0.98

8 19 2.3e-06 0.00027 22.8 1.2 1 23 233 255 233 255 0.98

9 19 7.3e-07 8.5e-05 24.4 1.1 1 23 261 283 261 283 0.98

10 19 2.4e-05 0.0028 19.6 1.5 1 23 289 312 289 312 0.97

11 19 1.1e-05 0.0013 20.6 6.1 1 23 339 362 339 362 0.96

12 19 0.00022 0.026 16.6 2.0 1 23 368 390 368 390 0.97

13 19 0.01 1.2 11.4 0.3 1 19 396 414 396 419 0.95

14 19 0.00025 0.029 16.4 3.4 1 23 424 446 424 446 0.98

15 19 0.012 1.4 11.2 1.2 1 23 455 477 455 477 0.98

16 19 1.8e-05 0.0021 20.0 0.1 1 23 483 505 483 505 0.98

17 19 1.2e-07 1.4e-05 26.9 0.8 1 23 511 533 511 533 0.98

18 19 3e-06 0.00035 22.5 4.8 1 23 539 561 539 561 0.97

19 19 5.4e-06 0.00063 21.7 0.5 1 23 567 589 567 589 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.7e-05	0.0031	19.5	1.7	1	23	33	56	33	56	0.97
2	19	4.5e-05	0.0052	18.8	0.9	1	23	61	83	61	83	0.99
3	19	0.038	4.4	9.6	0.4	1	23	90	112	90	112	0.98
4	19	3.9e-06	0.00045	22.1	2.1	1	23	118	140	118	140	0.99
5	19	1.1e-05	0.0013	20.7	3.5	1	23	146	168	146	168	0.98
6	19	0.00035	0.04	16.0	0.5	1	23	177	199	177	199	0.98
7	19	2.5e-05	0.0029	19.6	4.3	1	23	205	227	205	227	0.98
8	19	2.3e-06	0.00027	22.8	1.2	1	23	233	255	233	255	0.98
9	19	7.3e-07	8.5e-05	24.4	1.1	1	23	261	283	261	283	0.98
10	19	2.4e-05	0.0028	19.6	1.5	1	23	289	312	289	312	0.97
11	19	1.1e-05	0.0013	20.6	6.1	1	23	339	362	339	362	0.96
12	19	0.00022	0.026	16.6	2.0	1	23	368	390	368	390	0.97
13	19	0.01	1.2	11.4	0.3	1	19	396	414	396	419	0.95
14	19	0.00025	0.029	16.4	3.4	1	23	424	446	424	446	0.98
15	19	0.012	1.4	11.2	1.2	1	23	455	477	455	477	0.98
16	19	1.8e-05	0.0021	20.0	0.1	1	23	483	505	483	505	0.98
17	19	1.2e-07	1.4e-05	26.9	0.8	1	23	511	533	511	533	0.98
18	19	3e-06	0.00035	22.5	4.8	1	23	539	561	539	561	0.97
19	19	5.4e-06	0.00063	21.7	0.5	1	23	567	589	567	589	0.98

Sequence Information

Coding Sequence: ATGAAATTAATGCGCCGCTTTGTTTTTAGGCAGAAGGAAATCTATATAAAAATTCGAAAGGATATCTATACAGATAACATAAACAAGAAGTACCGATACAAATGTAGGAAATGTGATCGTGTATATACCCGCTCGGGTGCTTTAAAATACCATGTTAAAAGCCAGCATACTGATCTACGTTACACTTGTGAGGTTTGCAGTAAAGCATTCAAGTACAAACCTTCTTACGACAAACATATACTTACTCACAAAGCAGGCTTCAAGTCATATGTTTGCGAAACATGTTCCAGGGTGCTGTTGACCGAAGCGTCATATAAAAGTCATATGAGACTTCATTTAAATAACTTCCCATTTAAATGCGATAAGTGTGGACGTGGTTGTTCCAGTTCTTCGGCCCTAAAGGTCCATCAAAGTACCCACGAAGTGATTCAACGCTTTACATGCacgaaatgtaataaaattttcaaaaataaaatctatttcaatAACCACCTTAGAATCCACGAACCAGGGTTTAATCCAAAGAAGTACGTCTGCGAAATATGTTCTAGAATCTTATCATATCAGCAATCATATAAAATCCATATGAAAATTCATAATGGAAGAGATTCTCATGTTTGCGAAGTATGTGGAAAAGGTGTTTGCACTTCAACTAGTTTAATGCATCATATGCGCACCCATACTGGGGAGAAACCCTTTGTTTGTGATAGTTGCGGAAAGTGTTTTATCAGCAAGGCATTGTTAAGAACCCATGTTCGTGTTCATACTAAAGCTAAACCTTATACATGCGAACTTTGTCAAAAACGCTTTTCGCAAAGAAGCTCTTTGGTTATTCATATTCGCAACCATACTGGCGAGAGGCCGTTTAATTGCGAAGTATGTCAGAAGAAATTTGTAACTAGAACACTGTTAAATACGCATGTGAGAAAGTTACATGGGGGCgaagtttatttaaaactgcgaACTGACATTTACAAGAATAACCCTAACAATAAAATGGGATACCATCCAAAACACCAATGCGCTCACTGTAATAAGTTCTTCAAAAGCTCGTCTAACCTTCAAAGACATTTCTTAACGATCCATCGCAGAGCCACCTATTTCCCTTGCGATATCTGTGATAGAAAGTTCAGCACGAAAACACGCATGGAACAACATCGTTTTACTCATTTAAAAAACTACCCTTTCAAATGCGATAAATGCGAAAGGGGTTATACTAGTTTGGCCGCTTTGAAAGAGCATGATAGTATCAATCATGGTGGCTTACGGTTCACTTGCAAGAGCTGCAATAAGATATTTAAGGATAGATACTATTTTGGTAAACATCTTCTAACACATAAACCGAATTTCACCCCAAAGGAGTACGTTTGCCAAATCTGCTCAAAGGTGCTATTATATAAAACAACCTATAGGAATCATATGAAGATTCACAACGGGAGAGATTTCCATGTCTGTGAGATCTGTGGAAAGGGCGTTTCAACCACAGGTAGCCTATTGGATCACATGAGAGTCCACACTGGGGAGAAACCTTACATTTGCGATAATTGTGGGAAGGGTTTTAGTAGTAAGAAGTCTTTGAAAACCCATATACGAGTTCACACAAAGGAGAAGCCCCACTCTTGTAAAACTTGTAAAAAGAGCTTCACTCAAAGAAGCAGTTTAGTGGTCCATATGCGTTATCATACTGGTGAGAGACCATATGATTGCGAGATTTGTCAAAAGAAATTCATAACTAGGACATTACTTAATGCACATTTAAAGATACACGGTGCACCAATAAAGTGA
Protein Sequence: MKLMRRFVFRQKEIYIKIRKDIYTDNINKKYRYKCRKCDRVYTRSGALKYHVKSQHTDLRYTCEVCSKAFKYKPSYDKHILTHKAGFKSYVCETCSRVLLTEASYKSHMRLHLNNFPFKCDKCGRGCSSSSALKVHQSTHEVIQRFTCTKCNKIFKNKIYFNNHLRIHEPGFNPKKYVCEICSRILSYQQSYKIHMKIHNGRDSHVCEVCGKGVCTSTSLMHHMRTHTGEKPFVCDSCGKCFISKALLRTHVRVHTKAKPYTCELCQKRFSQRSSLVIHIRNHTGERPFNCEVCQKKFVTRTLLNTHVRKLHGGEVYLKLRTDIYKNNPNNKMGYHPKHQCAHCNKFFKSSSNLQRHFLTIHRRATYFPCDICDRKFSTKTRMEQHRFTHLKNYPFKCDKCERGYTSLAALKEHDSINHGGLRFTCKSCNKIFKDRYYFGKHLLTHKPNFTPKEYVCQICSKVLLYKTTYRNHMKIHNGRDFHVCEICGKGVSTTGSLLDHMRVHTGEKPYICDNCGKGFSSKKSLKTHIRVHTKEKPHSCKTCKKSFTQRSSLVVHMRYHTGERPYDCEICQKKFITRTLLNAHLKIHGAPIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -