Basic Information

Insect: Dynastes tityus
Gene Symbol: -
Assembly: GCA_029618875.2
Location: JAROYD020000003.1:3580349-3582371[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00011 0.013 17.5 0.3 1 23 194 216 194 216 0.98

2 17 0.0013 0.15 14.2 2.7 1 23 222 244 222 244 0.96

3 17 4e-05 0.0047 18.9 2.5 1 23 250 272 250 272 0.97

4 17 8e-08 9.4e-06 27.4 4.4 2 23 279 300 278 300 0.97

5 17 5.2e-07 6e-05 24.9 2.1 2 23 306 327 305 327 0.97

6 17 1.3e-05 0.0015 20.5 1.0 2 23 333 354 332 354 0.97

7 17 3.9e-07 4.6e-05 25.2 4.3 1 23 359 381 359 381 0.98

8 17 1.6e-06 0.00018 23.4 1.4 2 23 387 408 386 408 0.97

9 17 7e-06 0.00082 21.3 2.3 1 23 413 435 413 435 0.98

10 17 6e-07 7e-05 24.7 3.2 1 23 440 462 440 462 0.98

11 17 3.2e-06 0.00037 22.4 3.2 2 23 468 489 467 489 0.96

12 17 1.8e-05 0.0021 20.0 5.5 1 23 494 516 494 516 0.98

13 17 2.3e-05 0.0026 19.7 6.1 2 23 523 544 522 544 0.97

14 17 1.6e-06 0.00019 23.3 1.9 2 23 549 570 548 570 0.97

15 17 2.1e-07 2.4e-05 26.1 3.4 1 23 575 597 575 597 0.98

16 17 1.7e-07 2e-05 26.4 4.4 2 23 604 625 603 625 0.97

17 17 3.1e-06 0.00036 22.4 0.6 2 23 631 652 630 652 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00011	0.013	17.5	0.3	1	23	194	216	194	216	0.98
2	17	0.0013	0.15	14.2	2.7	1	23	222	244	222	244	0.96
3	17	4e-05	0.0047	18.9	2.5	1	23	250	272	250	272	0.97
4	17	8e-08	9.4e-06	27.4	4.4	2	23	279	300	278	300	0.97
5	17	5.2e-07	6e-05	24.9	2.1	2	23	306	327	305	327	0.97
6	17	1.3e-05	0.0015	20.5	1.0	2	23	333	354	332	354	0.97
7	17	3.9e-07	4.6e-05	25.2	4.3	1	23	359	381	359	381	0.98
8	17	1.6e-06	0.00018	23.4	1.4	2	23	387	408	386	408	0.97
9	17	7e-06	0.00082	21.3	2.3	1	23	413	435	413	435	0.98
10	17	6e-07	7e-05	24.7	3.2	1	23	440	462	440	462	0.98
11	17	3.2e-06	0.00037	22.4	3.2	2	23	468	489	467	489	0.96
12	17	1.8e-05	0.0021	20.0	5.5	1	23	494	516	494	516	0.98
13	17	2.3e-05	0.0026	19.7	6.1	2	23	523	544	522	544	0.97
14	17	1.6e-06	0.00019	23.3	1.9	2	23	549	570	548	570	0.97
15	17	2.1e-07	2.4e-05	26.1	3.4	1	23	575	597	575	597	0.98
16	17	1.7e-07	2e-05	26.4	4.4	2	23	604	625	603	625	0.97
17	17	3.1e-06	0.00036	22.4	0.6	2	23	631	652	630	652	0.97

Sequence Information

Coding Sequence: ATGTCGATTGAAATTCTATTTGAAGAAGAAACCGATCTAAACGAATCTTTAATCGATACCGTATTTGATTTAGCTGAGTGTTGTAGAACATGCTTACAACAGGAGTGTTCTTTGACACCAACAAATTCCTTAGATAGCGACTCCATAAAATTCTGTGACAAATTAGCTGTATGTGTATCAGGAATGaaatggGCAAAGGAGGGTGTACCATCCTTTATTTGTGGGCTGTGTATAGAAAAACTAAGAATTTCCTACGATTTCCAAATAGTTTGTTTACAATCAGATCAAGCACTTCAACTACAAGaggaagaaaatgaaacacagaGATCTAGAAGTGTAACTCCGGATATTACGACAACAACTGACTTAGCTGAATGTGAAATGACAATAGAGAATATTAGTTTAAGTGTAAAAGCAGTGAAAACGCAAATTCGGCCGTCGCCTCAGTGTGCCCCAGTTACCTCACCCGCAGCTAAATTAGAAGCTATACAGACATCTGACAACCCCCATAAGGATGGCTGCCTGATTTCTGGAAAAgaattatgtgaaaatattcAAAGACACACAGGCAAGAAATGTTTTCAATGTTCTGTATGCTTTAAAGAGTTTACGATGATAGCCCAGCTATCTGCGCATATGCAAATTCATACCAAAGGAAAGCTGCATGCTTGTAATTTTTGCGAGAAGGTGTATATTCATAAAGTTGACTTACTAGTGCATAAGCGTTCACATGCAGAAGAAAGTGCATTTGCATGTAGCTATTGCGATAAAAAGTTTACTGCAAAATATCGGTTGAACTCCCACTTAAAAACTCATAAAGGCAATAAATCTTGGCGATGTCAGATCTGTAATAAATCATACACAAGATCTTCCCATCTCAAACAGCACATGAGGacacatactggagagaagatttcctgtaaattatgcgaTAAAATGTTCACACATCCTTCCTCTTTAAGTGTACATATGAGAAAACATACCGGGGAGaaggtttcctgtaaattatgtgataaaaagtttatAGAGCCTTCTTCGTTCAgggtacatatgaaaaaacactctggagaaaagttttcctgtaaattatgtgataaaaagttcacaCATCCTTCCTCTTTAAgggtacatatgaaaaaacatactggagagaaggtTTCCTGTAAGATATGTGATGAAAAGTTTACATATCGTTCCTATTTAAgggtacatatgaaaaaacatactggagaaaagttttcctgtaaattatgtgataaaaagtttatGCAGCCTTCCTCGTTCAGGGTACATATGAAACAACATTCTGGAGaaaagttttcctgtaaattatgcgaTAAAATGTTTACACATCCTTCCTCTTTaagtgtacatatgaaaaaacatactggagagaaggtttcctgtaaattatgcgaTAAAAAGTTTACATATCGTTCCCATTTAAGAGTACATATGAAGGGACATACTGGaaagaagttttcctgtaaattatgtgataaaaagtttactCAGTCTTACTCTCTACATGTACATACTAGAAGACATACGGGCGATAAACCCTGGCGGTGTCAAACCTGTAACAAATCTTTTACACAATCTTGTCAGCTTACAAGGCACACGAAGACACATACTAGAGAGATTTCATGTAAactatgtgataaaaagttcacaCAGACTTCCTCTTTAAATGtacatatgaaaagacatactggagagaaattttcttgtaaattgtgtgataaaaagtttactCGGTCTTACAATTTAAATGTACATACGAGAACACATACGGGCGATAAACCCTGGCGGTGTCAAACCTGCAACAAATCATTTACACAATCTTCTCACCTTACACGGCACATGAAGatacatactggagagaagatttcctgtaaattatgtgataaaaagtataCTCGGTCTGACGCTTTGATTATACATATGAAGAGACATACTGGTGATAAACTCTAA
Protein Sequence: MSIEILFEEETDLNESLIDTVFDLAECCRTCLQQECSLTPTNSLDSDSIKFCDKLAVCVSGMKWAKEGVPSFICGLCIEKLRISYDFQIVCLQSDQALQLQEEENETQRSRSVTPDITTTTDLAECEMTIENISLSVKAVKTQIRPSPQCAPVTSPAAKLEAIQTSDNPHKDGCLISGKELCENIQRHTGKKCFQCSVCFKEFTMIAQLSAHMQIHTKGKLHACNFCEKVYIHKVDLLVHKRSHAEESAFACSYCDKKFTAKYRLNSHLKTHKGNKSWRCQICNKSYTRSSHLKQHMRTHTGEKISCKLCDKMFTHPSSLSVHMRKHTGEKVSCKLCDKKFIEPSSFRVHMKKHSGEKFSCKLCDKKFTHPSSLRVHMKKHTGEKVSCKICDEKFTYRSYLRVHMKKHTGEKFSCKLCDKKFMQPSSFRVHMKQHSGEKFSCKLCDKMFTHPSSLSVHMKKHTGEKVSCKLCDKKFTYRSHLRVHMKGHTGKKFSCKLCDKKFTQSYSLHVHTRRHTGDKPWRCQTCNKSFTQSCQLTRHTKTHTREISCKLCDKKFTQTSSLNVHMKRHTGEKFSCKLCDKKFTRSYNLNVHTRTHTGDKPWRCQTCNKSFTQSSHLTRHMKIHTGEKISCKLCDKKYTRSDALIIHMKRHTGDKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00626364;
90% Identity: iTF_00626364;
80% Identity: -