Dtit000113.1
Basic Information
- Insect
- Dynastes tityus
- Gene Symbol
- -
- Assembly
- GCA_029618875.2
- Location
- JAROYD020000001.1:1113708-1115254[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.85 1.5e+03 0.9 0.1 18 35 73 92 69 94 0.71 2 12 1.9 3.3e+03 -0.2 1.1 13 39 191 214 178 218 0.70 3 12 0.015 26 6.6 0.6 14 28 220 234 212 242 0.79 4 12 0.088 1.6e+02 4.1 0.6 18 29 252 263 242 273 0.81 5 12 0.012 21 6.8 7.4 13 41 275 300 263 302 0.76 6 12 0.0061 11 7.8 1.5 15 39 304 325 299 334 0.74 7 12 0.021 36 6.1 3.2 13 38 330 356 323 358 0.74 8 12 0.38 6.6e+02 2.1 5.4 9 37 355 382 348 384 0.73 9 12 0.019 33 6.2 5.4 15 40 387 409 379 412 0.79 10 12 0.022 38 6.0 1.2 6 40 407 436 406 438 0.69 11 12 0.00019 0.33 12.6 5.1 8 41 436 465 433 467 0.79 12 12 0.00062 1.1 11.0 3.7 9 41 465 492 461 493 0.75
Sequence Information
- Coding Sequence
- ATGtcatttgaaattatacttaagGAGGAAAACGATCCGAATGAGGTTACAGAAGATATCGTATTCGATTTAGGTGACTGCTGTAGAACATGTTTAGGACACGAGTGTTCCTTGACACCAACAAATTCCTGGGATAGCGACTCCATACAATTCTGCGACAAATTGGCAGCCTGTGTCTCAGGAATAAAGTGGGCGAAGGAGGCTGTGCCTTCTCTTATTTGTAGAATATGTATAGAAAAACTAAGAATTGCGTATGATTTCCAAACAGTTTGTTTACGATCAGATCAAGCACTTTACTTCCAAAGGAAAGCGAATAAAATACAAAGTCGCAAGAGTGCAACTCCCAATCCTACAACAACAAGTGACTTGGCAGAATGCGATGAAACATTAGCGAATGTTATTTTAAGCGTGAAATGTGAGGAAACGCAACTGCAACCTTTACTTCCGTGTGCCCCAGATACTTCAACTGCCTCAGCACAATTAGAAGCTTCCCAGACATTAGATAATCCTGTCGAACAGGGTCACCAGGTTTGCGAAAAAGAATTACGTGAACATATTCAAACGCACATAAGTGAGACGTGTTTACAATGTTCAGTCTGCCTTAAACCGTTTACGACAACAGCCGAACTAACTGCACATATGGCAATTCATGCCGAAGAAAAGCCTtatgtttgtaatttttgtgagaaggaatatattaatgaatCCGACTTTCTAATGCATATATGTCCACGTATAGGTGAAGGTCCGTTTGCATGTAGTTATTGCGATAAGAAGTTCAGTAGTAGATATATGTTGAAGCCCCACATAAGAACTCATACGGGCAATAAGCATTGGCAATGTCGAATCTGTAATATATCTTACACGAAATCATCTCATCTTACACGGCACATGAAGACGCACACTGGAGAGAAGtattcctgtaaattatgtgataaacaGTATACACGATCTGAGTTTTTAGATGCACATATGAGAACACATATCAGCGATAATCGTCGCCAATGTGAAATCTGTAACAAATCATACGCATACCCTTCTCACCTTGCAACACACATGAAGACACATACTGAAGAGAAGTTTTCGTGTAAATTTTGTGATAAAAAGTTTATATGGCACACCTCTTTAACAACACACATAAAAACTCATACCGGTGATGAACTTTGGCGGTGTAAAATCTGTAACAAATCGTTTACAAAATCTTCCCATCTTTCAGCGCACGTGAAAacacatactggagagaagttttcctgtaaattatgtgataaaacgTTTTCATGGTCAGCCTCTTTAGGTAAACATATGAGAACACATACCGGTGATAAACCTTGGCAATGTAAAATCTGTAACAAATCATATACAAGATCTTCCCATCTTTCAGCACACATGAATACACATACTGGAAAAAAGTTTTcatgtaaattatgtgataaacaGTATACACGATCTAATTCTTTAAATGCGcatatgaaaagacatactTTTGAAAAgtcttaa
- Protein Sequence
- MSFEIILKEENDPNEVTEDIVFDLGDCCRTCLGHECSLTPTNSWDSDSIQFCDKLAACVSGIKWAKEAVPSLICRICIEKLRIAYDFQTVCLRSDQALYFQRKANKIQSRKSATPNPTTTSDLAECDETLANVILSVKCEETQLQPLLPCAPDTSTASAQLEASQTLDNPVEQGHQVCEKELREHIQTHISETCLQCSVCLKPFTTTAELTAHMAIHAEEKPYVCNFCEKEYINESDFLMHICPRIGEGPFACSYCDKKFSSRYMLKPHIRTHTGNKHWQCRICNISYTKSSHLTRHMKTHTGEKYSCKLCDKQYTRSEFLDAHMRTHISDNRRQCEICNKSYAYPSHLATHMKTHTEEKFSCKFCDKKFIWHTSLTTHIKTHTGDELWRCKICNKSFTKSSHLSAHVKTHTGEKFSCKLCDKTFSWSASLGKHMRTHTGDKPWQCKICNKSYTRSSHLSAHMNTHTGKKFSCKLCDKQYTRSNSLNAHMKRHTFEKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00626427;
- 90% Identity
- iTF_00626427;
- 80% Identity
- iTF_00627491;