Basic Information

Gene Symbol
-
Assembly
GCA_029618875.2
Location
JAROYD020000001.1:14419104-14419910[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-08 3.7e-05 25.4 0.5 2 43 9 67 8 70 0.90
2 2 2.3 6.5e+03 -1.0 0.0 25 44 167 187 162 188 0.82

Sequence Information

Coding Sequence
atggatGATCAGAATGTAACAACTAAGGAGTGGACATCAGCTGAAATTGATTTGCTAATAACCCTGGTAAAGCAAAATCCGGAAATATACGATCAATTAAAACCAGGATATTTGAATATGGGAATATTAGATAATTCTTGGCAAACAATTGCAAATACCATACAGACCAAAGATGTGCAAGCATGTAAAAACAAGTGGCAGATTCTGAGAGGTTGTTATAGAACTCGAAGAAGTGGTGGTAAGGGTAGTAAAAAATGGCCATATTACGAATCTTTATCTTTTCTCGATAGTTACATTGGACAAAGGAAAAGtTTAGTTAAATTCACACCTGGAAATGATGATACTTGCTTTGAAACAGTGATACTCGATCCAAATTTGGATTACGAAGAATGTTCGTCATTTACAATAGAAGAAAACAATTCTGTCCTTGAGTCAACATCAATGGCAGATAGTTCTACTCATGATAGTAAAAGGAGTATTTCACCCAATGAGATAGAGActataacaaattatttaaaaagtaaaaaatcaaaatcttcgatacatttatttttgcaaagtaTGGAAGAAGATATAGCTAAATTGTCTCCAAAGGGATTAAGGGATTTCAAAAGAGAAATGTTAGCAACATTAGATAAATACCTAGAGGCTGAAGGGAAAGATAAAATTTAA
Protein Sequence
MDDQNVTTKEWTSAEIDLLITLVKQNPEIYDQLKPGYLNMGILDNSWQTIANTIQTKDVQACKNKWQILRGCYRTRRSGGKGSKKWPYYESLSFLDSYIGQRKSLVKFTPGNDDTCFETVILDPNLDYEECSSFTIEENNSVLESTSMADSSTHDSKRSISPNEIETITNYLKSKKSKSSIHLFLQSMEEDIAKLSPKGLRDFKREMLATLDKYLEAEGKDKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01120807;
90% Identity
iTF_00626138;
80% Identity
iTF_00626138;