Dtit051285.2
Basic Information
- Insect
- Dynastes tityus
- Gene Symbol
- -
- Assembly
- GCA_029618875.2
- Location
- JAROYD020000021.1:1131103-1135191[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-08 1e-05 26.7 0.1 4 40 17 53 14 57 0.91
Sequence Information
- Coding Sequence
- ATGCCTCGTAGTAGAGATGGTAAAAAGCGACCGCCTGTTGATCGTCAAGCACTAAAATTCGCTATAGAAGCAGTTCTAAGAGAGAATCTTCATATTCGAGAAGCAGCTGAAGCCTACAATGTTACTAAATCGACATTGGCTCGTCATCTACAAGCCCACAGGAATTCTGGAAAATCAGAGTTTGAATATAGCGCAACCAATGCTGTTAAACATGTTTTTACTGAGGAAGAAGAAAAAGCTTTGGTGGAATATTTTATACTTGCTGCAAAATACCACTATGATAAGCAGGCGAATGATGTTAATAAGGAAGAAGATATGGACAGTGAGAACGATGAGGACGATCCCATTGAAGTCAGAAGTGTAGTGACTGACGCGCAAGCTATACAAGTTTTTAACCAAGCTTTAGATTGGgctgaaagaaaagaagtatcaTACACGAATATTTTAGTTCTTCGTAAATTACGGGCGCAGGCATTGGAAGACAATGCTAAGCGCAAATTTACGCAGACTAAAATTGTTAACTATTTctcttctaattaa
- Protein Sequence
- MPRSRDGKKRPPVDRQALKFAIEAVLRENLHIREAAEAYNVTKSTLARHLQAHRNSGKSEFEYSATNAVKHVFTEEEEKALVEYFILAAKYHYDKQANDVNKEEDMDSENDEDDPIEVRSVVTDAQAIQVFNQALDWAERKEVSYTNILVLRKLRAQALEDNAKRKFTQTKIVNYFSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -