Basic Information

Gene Symbol
ct
Assembly
GCA_029618875.2
Location
JAROYD020000014.1:916681-924224[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-32 3e-28 99.3 0.0 3 77 309 384 307 386 0.96
2 2 1.6e-30 1.8e-26 93.6 0.0 3 75 524 597 522 601 0.95

Sequence Information

Coding Sequence
ATGGGCAGGTTTCGATTGTCGACAGACAATTTTTCCTCAGGCAAAGACACTGGCATACCGACTTTTGGCAGGCCAGAAAACGAATATCCAGAGGATAGAATAGCGCACATCCTCAGCGAAGCGTCCCACATGCATATGAAGACGCCGGTGGAAGACACGCATAGCAACGACGATTCGAAATCGCCTCAAGGATGTCCCAGTCCATTTTCGAAAGACTCCTCGCAGAATCGAAAGCTGAAGAAGTACGAAAACGACGATATACCTCAGGAGAAAGTCGTGAGGATATACCAAgaagaatttgcgaaattaatgGGAAGGAGGTTAGAGGATATGAGGAGTTCCAGAGACGTAGTCCATAGTATGTTTCTGCCACAAATATTTAGCGGAGCGCCTATGGATCGGACCCAAGATGATATTCGCGCAGCAATCGACGCTTACCACAGAGAATTGGCTAAAATCAACGTCACCCAAACTCCTGGTCCACTTCCTAATCTCGGTCTTCTCGCGTTACAACAGCAAGCTCTAGCGCATAACCCTACGATGAACGGAGGTGCGCAAGATCTATCTCTACCAAAAGAGAAGACCAAGATGATGAACGGTACTGAGGAGAAGGACAGGGAAGAGGATTGTTCGAAGCATTCTGGTAGCGCTTTCAGTTTGGTGAGACCCAAAATCGAACCGGGAACGACGCCCCAAACAACAAGTTCTACCGCGTCCAGTCCTTTAGGAAACACAATCTTGCCACCCGCGATGACCCCAACCGACGATTTCTCTGGATCGGCGGCCGCTAGTCCTTTACAAAGAATGGCTTCCATTACGAACTCTTTAATTTCCCAACCTCCAACGCAACCCCATCCACCATCCTCGCAGCGGCCCCTTAAAGCCGTGCTCCCGCCGATAACCCAGCAGCAATTCGATCTATACAATAACCTAAACACGGAAGACATAGTTAAGAAAGTTAAAGAACAATTAAGCCAGTATTCCATAAGCCAAAGATTATTCGGAGAATCGGTTCTTGGACTCTCGCAGGGATCAGTTAGCGACCTATTAGCACGGCCTAAACCCTGGCATATGTTAACGCAAAAAGGTAGGGAACCCTTCATCAGAATGAAGATGTTTCTAGAAGACGACAATGCTGTACATAAACTAGTTGCTAGCCAGTATAAAATAGCACCTGAGAAGCTGATGAGAACAGGCGGATACGGAGCTGTCCCTTACTACATTTCAGCCTGTACATCCGTCGCCAAGCCAATGCCGCCTACACCTAAAATGCTGAGCGAGGCCGCTGGTCTCCTCAATAAAATGCAAGAGTCGCAGAGTCTTCTGCCTCCGTCGTTGCAGATGGGGCACCATAATCAAAATAATCCTCAACCTCCACCGCCACCGATGCTTCTGACACCGCCCGGGGTGCCACCACATCACGCCATAACCTTGCAGAACCAGGAGCATATGAAGAAGAACAATCATAGTCCGCATGGTATCCCGCCATCACCTATCAACCAACAGCCGACGATGAGACCGATGCACCAGCATATTTCGCCTAGTGTATACGAAATGGCGGCGCTGACGCAAGATCTCGACACGCAAGTCATCACAACAAAAATCAAAGAAGCTCTTTTGGCGAATAACATAGGCCAAAAGATCTTCGGCGAAGCAGTTTTAGGCTTGAGTCAAGGTTCAGTCTCGGAACTTCTCTCCAAACCTAAACCATGGCACATGCTCAGCATCAAAGGTCGGGAGCCGTTCATCCGGATGCAGCTCTGGCTGAACGATGCCCACAACGTCGACAGGCTGCAAGCGCTTAAAAACGAAAGAAGAGAAGCCAATAAGCGTAGGAGGTCTTCCGGTCCCGGAGCGCATGACAACAGCTCCGACACCTCATCGAACGATACCTCCGAGTTCTACCATTCGAATTCCCCCGGTCCGGGACCACCGTCCTCGAAAAAACAAAGGGTCCTATTCAGCGAAGAACAGAAAGAAGCGTTACGACTGGCCTTCGCTATGGATCCGTACCCTAATATGTCCATAATGGAATTTTTAGCCGGCGAATTGAACTTATCAAGTCGGACTATAACGAATTGGTTCCATAACCATCGAATGCGGTTAAAACAGCAGGTTCCTCACGGCATAGCGACCGATATTCCGCCGAGAGACCAAACCAGCAATCAAACGCCGTTCGACCCATCACATTTTAAGATATTATTAAACCAAAGATTATTAGAACTTAATAAGGAACGAATAGGACTCAGCAATCTGCCCTTAGGATATCCCTACATCGCGACCAATCCGAATTTGGCAGCCTTGATCGGGCGGGGACTACTTCCGGCCAGCGATATGGATTTATCCGCTTTAAATAACGCTGTTAAAGAGCAAATGAGCGGGTTGGACTTATCGATGACCTCGTTAAAAAGGGAACCTGGGGATTTCGACGATGAAGATGACGTCGATAGTAACGTAGGATCTGAAGACTCCAATATGTCGGGGAGCCTGCATAGAGGCGAGGTAAAAATCGAACGGAAAGAAACGCCGGCTTCATCGCAAGGTAGGTCCTCAAGGAGGAAACCTGCGGCACCCCAGTGGGTAAATCCCGAATGGCAGGATGAGAAGGAGAAACAACAACACCAACCTCAAAGCGGAGACGAAGTAATCATAAACGGAGTTTGCGTGATGCAAACTGAAGATTACGGTAGGAGGAGTTCCGAAGAAACGGTCAGAGTGGAACCAACCCCGGTGATGGATCGTTTCGAAGACGACCAGAGCGACGCCTCATCGGTAAGCCAAGGCGACGATCAACATCAAGAGCAAAGACATCATCACTTGCACCACCAAGACAAAGACGAACTCGAAGAAAACAACGAAGAACCGGAACCGGAGAAACAAGTGAAACAAGAACGGGAAGTGGTGGAAGAAGAACGATGGGATTATTaa
Protein Sequence
MGRFRLSTDNFSSGKDTGIPTFGRPENEYPEDRIAHILSEASHMHMKTPVEDTHSNDDSKSPQGCPSPFSKDSSQNRKLKKYENDDIPQEKVVRIYQEEFAKLMGRRLEDMRSSRDVVHSMFLPQIFSGAPMDRTQDDIRAAIDAYHRELAKINVTQTPGPLPNLGLLALQQQALAHNPTMNGGAQDLSLPKEKTKMMNGTEEKDREEDCSKHSGSAFSLVRPKIEPGTTPQTTSSTASSPLGNTILPPAMTPTDDFSGSAAASPLQRMASITNSLISQPPTQPHPPSSQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGAVPYYISACTSVAKPMPPTPKMLSEAAGLLNKMQESQSLLPPSLQMGHHNQNNPQPPPPPMLLTPPGVPPHHAITLQNQEHMKKNNHSPHGIPPSPINQQPTMRPMHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSSKKQRVLFSEEQKEALRLAFAMDPYPNMSIMEFLAGELNLSSRTITNWFHNHRMRLKQQVPHGIATDIPPRDQTSNQTPFDPSHFKILLNQRLLELNKERIGLSNLPLGYPYIATNPNLAALIGRGLLPASDMDLSALNNAVKEQMSGLDLSMTSLKREPGDFDDEDDVDSNVGSEDSNMSGSLHRGEVKIERKETPASSQGRSSRRKPAAPQWVNPEWQDEKEKQQHQPQSGDEVIINGVCVMQTEDYGRRSSEETVRVEPTPVMDRFEDDQSDASSVSQGDDQHQEQRHHHLHHQDKDELEENNEEPEPEKQVKQEREVVEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00987639;
90% Identity
iTF_00307455;
80% Identity
iTF_00626946;