Basic Information

Gene Symbol
Xbp1
Assembly
GCA_029618875.2
Location
JAROYD020000011.1:25555504-25562201[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-15 3.2e-12 47.9 12.5 2 64 46 108 46 110 0.95
2 2 7.2 1.9e+04 -2.6 0.0 22 34 229 241 229 242 0.84

Sequence Information

Coding Sequence
ATGAGTATGTCTGTGCCGGCAATTTTAAAGTActtaaataacaacaacaataacgaTTATAACGTTTTGGCCGATATGGAAAATAACGATAATCCGGGAAGGTCCAAGAAACGAAGATTGGACCATCTATCATGGGAGGAAAAAATACAAAGGAAAAAACTCAAGAACCGCGTTGCCGCACAGACATCCAGAGACCGTAAAAAGGCTAAAATGGAGCAGATGGAGAGCGCCATCAAAGAACTCTTTGACAAGAACGAAGAGCTGATCTCCGAGTGCGAGAAATTGCGCTTGCTGAACGAAAAACTGCAGGTAGAGAACCAGGATCTGCACAGCCGACTACGCGTACCGTGCCCAACTTGTTCCCAAAGTCGTCCTGTTGAGTGTGTTGCCCAGAATGGATCCGCAGCGTCCCCTAACCCTCCGCCGAAGGGCGGTACGGGCGCTATGGAAGATTGTAGTGGCCTGCCTTCTCTACCAGACCTGCTCGACGAACTCAATCGAGACGTCGATCTTTCCTCACTTGAAGAGATCACGCAGAGCCTCCTTCAGGATATCGCAGCAGACCTGGAGGCTTCTGCTCAAAAGGCAAATTGCCAAGAATCAGAACGAACTTCAAAAGAATGCCTTGAACAAATGGTGGGGTCGGCACCAGAACTCGTGGAATCCGATAGATGTGAGAGCATAAAACATCCTGAAAAGGATGATAAGCTGGAATGCGAGATATCGCCATACCTGCTCTTACATCACGACTACTTCGCAAAACGCGATAACCCCAAAACAACAACGCACATCAACAAAAGAAGACAACAACCTTATTCGATAAAACCGCAAAATAGCGATTCCAAAGACAAATTAAGCACAAAAACGAAATTCAAGGAGATCCTACCAAAAATCGAAGATCCGCTGGTTCTGAGAGTCAAGCCCGAGATCATTGTAGACAGTTGCGAGTCTGATCTGGTCTACGGCACCTACGATGAGAATACAAACTGCATCGTCATCGTCAATAACGACAATTTGAGGCTGGGAGAAGCCGTCACTGAAGTCACGACTTCGGAAAGCGTCTCTAGTCCCATTAGCATGAATTATTTGCAAACACCCTTAAATTCTGATTGTTCAAGGGATAGTTTCTCACCAGCACCTAGTTCTGGGTACGAGTCTATTGATTCACCAAGCAGTGAAATGGATATATGGGACGAATGCGTGTCAGAATTGTTTCCATCTTTGATATAA
Protein Sequence
MSMSVPAILKYLNNNNNNDYNVLADMENNDNPGRSKKRRLDHLSWEEKIQRKKLKNRVAAQTSRDRKKAKMEQMESAIKELFDKNEELISECEKLRLLNEKLQVENQDLHSRLRVPCPTCSQSRPVECVAQNGSAASPNPPPKGGTGAMEDCSGLPSLPDLLDELNRDVDLSSLEEITQSLLQDIAADLEASAQKANCQESERTSKECLEQMVGSAPELVESDRCESIKHPEKDDKLECEISPYLLLHHDYFAKRDNPKTTTHINKRRQQPYSIKPQNSDSKDKLSTKTKFKEILPKIEDPLVLRVKPEIIVDSCESDLVYGTYDENTNCIVIVNNDNLRLGEAVTEVTTSESVSSPISMNYLQTPLNSDCSRDSFSPAPSSGYESIDSPSSEMDIWDECVSELFPSLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00625896;
90% Identity
iTF_00625896;
80% Identity
-