Dhyl043285.1
Basic Information
- Insect
- Dynastes hyllus
- Gene Symbol
- -
- Assembly
- GCA_029619255.2
- Location
- JAROYC020000030.1:469177-480131[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3.2 4e+02 3.2 0.5 2 13 113 124 112 133 0.79 2 12 0.0065 0.81 11.6 8.2 1 23 135 157 135 157 0.98 3 12 0.33 41 6.3 1.5 2 23 409 430 408 430 0.95 4 12 0.0021 0.25 13.2 5.7 1 23 436 458 436 458 0.98 5 12 0.00019 0.024 16.4 0.3 1 23 463 485 463 485 0.97 6 12 0.00014 0.017 16.9 0.8 1 23 491 514 491 514 0.96 7 12 0.0056 0.69 11.8 0.3 1 23 519 541 519 541 0.98 8 12 2.7e-05 0.0034 19.1 0.4 1 23 549 571 549 571 0.96 9 12 0.0013 0.16 13.9 1.0 1 23 576 598 576 598 0.98 10 12 5.1e-07 6.3e-05 24.6 0.4 1 23 604 627 604 627 0.97 11 12 0.0037 0.46 12.4 5.4 1 23 632 654 632 654 0.98 12 12 0.0016 0.19 13.6 0.4 1 23 661 684 661 684 0.97
Sequence Information
- Coding Sequence
- ATGCTACTCCAAATCCAAGGTATCACACTTCCTGAGGAAAGTCTTGAATTGGCAACCATTTTAATTCGTCCATTTTCTAGGACTACGACAGACACAATTACCACAGAATTTGCAAATTACGACGACGTAACGATTGAATTGGTTGACACTGACGGATCAGAAAATATGGAAAGGAATGCAGAGATTATCAATGATACTGTGCACACTAATGGATCTTCCACACATGCTCAAAATAAGCAAATAATTAAGAGAAGTAACAAGAGATCTAAAAGGAAGGATagaaaatcttctaaaagtagcGAGAAATCGAAAGATAAGGTTCCCAATAGGAAGCTGAAATGCAATCTGTGTAATATGGAATTTCCCAGTTCCCAAAAGGACAAGCATTTCGAGGAGCATTCTTACAAATGTCATAGATGTGGAAAAATCTGCGGACACAAAAATCAGTATCAGTTGCACATGAAGTTACACCGCCTGGTGGATAAAAGAGATGAAAGAGGAGCCAACAGAAGAAGAAGGTTCTTAAATTTCGATGTCAACGATACTATAGATATCGTCTGTAATGATATAGATTTTGACACCGAAATTTCCCATGCGAAAACCTTAAGGAAATACCCTGGAGCTTCCGCTCAGTCTCCTTCGGAGAACCAAGTCCGAAATGTAATCGAACTCGATGATTCTGAAGACGATATTGTCTTGTCAGAATTGATTGGAAAGTGTCGTCAATGTCAAAAAGGAATTGATAAGTCGCAGAAACAATCTAACCTATGCCATTCTTGTTCCACCAATGGTAATAGTAGTATGAGTAACTCTGATGATGGAGAGGATATgTGCAACAACCCATCAAACGATATAGGTTTATATCCTTCGTCAACGTTTGAAACCATTCTTTCGAATCCTAACACCACACCGGATAACACCATCACCTTAATTGCCCAAACACCTAGCGGTAACTCGAAAAAATTGGTAGTCAAGCTTTCGCAGCTTACCTTgataaaaaaggaagaatttGAGGCATCCTTAACGGAAATCAAACAAGAGAGTTTCATCCCATCGATTCCTTCAATACCAAGCGAAGAAGATACGAAAACAGCGATGGACTTGAAAGTAACAAAGAGTGATgttaaaaatttcgaatttgataCGAAATATATTGTTTTGGATCCTTGCATAAAAGAGCAGATGAAAGAAAAATACTCGGGTGATAAGGAAATTGATACCTTAACATGTGAGCTATGCTCCAAGCAATTTTTAACCTTATCTAGATATCAAAAACACGTAACGTCGCATTCTAGTGATGACCAGCATACTTGCTGTTTGTGTGAGAAGGTTTTCAGGAGCTCTTTAATGTTGCAAAAGCATGAGAAGACTCATAAGGTCACTAGATTCGCTTGCGAATATTGCAATAAGGAGTTAGCGTCTAAACAACAATTGGATATCCATATTAGACGCCATAAAGGGGAGTATTCTCATAAATGTGGCGAATGTGGTAAAGAGTATTACAATGCTAAGGCGTTTAGGCAACATATCGAGTCCGAACATAAAGGAATTAGGTATACTTGTTTAATTTGCGGATCAGTCCTTAGAAGTAGAAGGTATTGGAGGGATCATATGGCTAAACACACAGCTACAGATGTTAAAAGGTATCTATGtcaaatttgcaataaattctatAGTAGCAAAGCGGCTTTAAACGGTCACATGAAGATTCATGGAGAAGAACGCTTTGAATGCAACATTTGCGGGAAAAAATCAACCCAAAAGGCTGCGCATTTAGTGCACATGAGATTGCACACTGGAGAGAAGAACTTCGTATGCGAGATTTGCGGAAAGAACTTCGTCAGGAAAGATATGCTTCAGATCCACAAGCGGAGAGTCCATGATTCTTCGAAACACCAATGCGAATATTGTCAACAACCATTTGAAACCGAGCACCAACTATTAATTCACTACCACACCCATGAGGAGGTTCAGAAGAACTTCCCGTGCGAATTTTGCCCGAAGAAATTCATCGACATCAACTTCCTACGAAGCCACGTCAATAAAATCCACGTAGAGAATAAAACAGATGATTTAACTGGTTTAAGGTCTTCCCGAAGGATTAGAAAACGTAACGAGAAGATTAGGTGTTTGAATTGCGATAAATTTCTGTTAAAATCGCAGGTCAAATCGCATTCTTGCGCTAGTAAGACCGAAATGATCGAACACAAAGCCCTAATCGACTAtagctttgaaaaatttgaagatgTAGTGCCTTTTGAATATAATACGCATAATGAAATGAGCAGTTGCATTGGTGGAGGGAATATTATGTACGAATTCAAGGACGTTATCAATACTGAAGGAATGGTGGAAGTTTGTATTGCTAATGAGGGTGTCGATTGTTTTGGGGATGGTGCCAAATAG
- Protein Sequence
- MLLQIQGITLPEESLELATILIRPFSRTTTDTITTEFANYDDVTIELVDTDGSENMERNAEIINDTVHTNGSSTHAQNKQIIKRSNKRSKRKDRKSSKSSEKSKDKVPNRKLKCNLCNMEFPSSQKDKHFEEHSYKCHRCGKICGHKNQYQLHMKLHRLVDKRDERGANRRRRFLNFDVNDTIDIVCNDIDFDTEISHAKTLRKYPGASAQSPSENQVRNVIELDDSEDDIVLSELIGKCRQCQKGIDKSQKQSNLCHSCSTNGNSSMSNSDDGEDMCNNPSNDIGLYPSSTFETILSNPNTTPDNTITLIAQTPSGNSKKLVVKLSQLTLIKKEEFEASLTEIKQESFIPSIPSIPSEEDTKTAMDLKVTKSDVKNFEFDTKYIVLDPCIKEQMKEKYSGDKEIDTLTCELCSKQFLTLSRYQKHVTSHSSDDQHTCCLCEKVFRSSLMLQKHEKTHKVTRFACEYCNKELASKQQLDIHIRRHKGEYSHKCGECGKEYYNAKAFRQHIESEHKGIRYTCLICGSVLRSRRYWRDHMAKHTATDVKRYLCQICNKFYSSKAALNGHMKIHGEERFECNICGKKSTQKAAHLVHMRLHTGEKNFVCEICGKNFVRKDMLQIHKRRVHDSSKHQCEYCQQPFETEHQLLIHYHTHEEVQKNFPCEFCPKKFIDINFLRSHVNKIHVENKTDDLTGLRSSRRIRKRNEKIRCLNCDKFLLKSQVKSHSCASKTEMIEHKALIDYSFEKFEDVVPFEYNTHNEMSSCIGGGNIMYEFKDVINTEGMVEVCIANEGVDCFGDGAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00627675;
- 90% Identity
- iTF_00627675;
- 80% Identity
- -