Basic Information

Gene Symbol
ZBTB8A
Assembly
GCA_029619255.2
Location
JAROYC020000004.1:10220326-10222201[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.053 6.5 8.8 0.1 1 23 195 216 195 216 0.89
2 10 0.0099 1.2 11.1 0.6 1 23 258 279 258 279 0.98
3 10 0.0016 0.2 13.5 4.7 1 23 285 307 285 307 0.97
4 10 0.001 0.12 14.2 2.3 1 23 313 335 313 335 0.98
5 10 3.2e-05 0.004 18.9 1.9 1 23 343 365 343 365 0.96
6 10 0.027 3.4 9.7 8.4 2 21 379 398 378 399 0.92
7 10 2.8e-07 3.4e-05 25.4 0.3 1 23 409 432 409 432 0.97
8 10 2.5e-05 0.0031 19.2 0.8 1 23 464 486 464 486 0.98
9 10 1.1e-05 0.0014 20.3 0.8 1 23 492 514 492 514 0.98
10 10 0.00083 0.1 14.5 4.5 1 23 520 542 519 542 0.96

Sequence Information

Coding Sequence
ATGAATACACCGAATGATAACCTTTCTCTAAATATTGGCAAAATATGTAGAATATGCTTATTAGAAAGCGAGAATATGCGTTCTGTTTTCAGTAAACTTGATCAAACAGAAATTTTGGAGATGGATGTAATTTATTTGGCCGATGTCTTAAAAAGAATTACTACAATACCTGTGGAGGAAACAGATGGTTTCCCTCAATTGCTTTGTTTGAGTTGCATATCGTTAATACATGCAgcttataaatttcaaattcaattcGATAATTCATATGCTCTGATTCAAGAGTACTTAGCAGGGATTAAAGATGGAGTTATGCAAGATACTGTGAATATGGAAAGCGATAGTACGAATTGTTATTTTGATTATGGTAGTAATAACGAGATGTCGAGCTCATCACCAAAGCATCAGAATTTGGATATATCTGAGGAAATGCGTCAAGTGGAAACAATAGCAAATACTAGgagacaaaataattttaaaatcttgaaaAGGACACGAAGATTAAAATATGaGAAATTAAATGTACAAGTTGGTGAAGGTGGTTCTAGTACAGGGAAAAATAATGAAGAAGGTATGAAAACATTTCCTTGTCCTATATGTACGAAGGAATTTCCAGCTTTAGAACTCCGAGAGCATGCACATATTCATAAagcattgaaaaaatatttgagtATTCCCGCTGACAAGAAAGTTAAACCGAACAGTCAATTCTACGTTGACAGCTTTAATGACAATTTGAATGTTAGTATTcataatagaaaagaaaaaattcataaatgcgTAATGTGTAGTGAGGAATTTAGTGCAATAGACTTACGTATACACTTGAATACACATCGGAATCAAAAGgaATATAAATGTAATCAGTGCGAACGAATCTTTAAAAAGATGAACCATCTGAATACTCATCGTGTAAAACACCTTAAAGAATTTCCATTTAAATGCGAACAGTGTGGTAAAGGATTCGTGATCAAGACTAATTATGAATGCCACATGTTAACGCACAATACGAATCAAGAACTTCCTTATGAGTGCTCGCAGTGTTTGAGAAGATTCTATAATCCGGAGCATTTAAACAGGCATATGGTGCTACATACAGAGAACATTAGTTACTCAGTGAAGTATAAAGTATGTAAATGCTACCATTGTTTGAAGACGTTCAAGGATCGTGACGAATTGAAGACACATCATTGTGTACCTGTTCAGGAGACTCGGAAGATCAAGTATCCATGTAAAGATTGcggaaaagtatttaaaaattcagcTGCCCTCTACAACCACACTAGGAACATCCACAGGTTAAATGGTGCAAAGGTCTTATGTTCAGTCTGCGGACTTCACGTTGCCAATATTTATAATCACATGATGCGCCATTCTGGGGAGAAACCTTATCAATGTACTCAATGCAGTAAACGCTTCATTGGAAAACCTCAGTTAAGGCAACATTTACTTGTTCATTCCGGTTTAAAACCGTTTGTGTGTAGCGTTTGTGCCAAAGCTTTTAACAATCACTACAATCTTCAAGTCCATGAACGTATCCATAAAGGCGATAAGTGTCATATATGTACCGAATGTAACAAAGGATTTCTCGAAAAGTCATATCTTAAGAAACATATGAATGTGCATACCAAGGTGACGTAA
Protein Sequence
MNTPNDNLSLNIGKICRICLLESENMRSVFSKLDQTEILEMDVIYLADVLKRITTIPVEETDGFPQLLCLSCISLIHAAYKFQIQFDNSYALIQEYLAGIKDGVMQDTVNMESDSTNCYFDYGSNNEMSSSSPKHQNLDISEEMRQVETIANTRRQNNFKILKRTRRLKYEKLNVQVGEGGSSTGKNNEEGMKTFPCPICTKEFPALELREHAHIHKALKKYLSIPADKKVKPNSQFYVDSFNDNLNVSIHNRKEKIHKCVMCSEEFSAIDLRIHLNTHRNQKEYKCNQCERIFKKMNHLNTHRVKHLKEFPFKCEQCGKGFVIKTNYECHMLTHNTNQELPYECSQCLRRFYNPEHLNRHMVLHTENISYSVKYKVCKCYHCLKTFKDRDELKTHHCVPVQETRKIKYPCKDCGKVFKNSAALYNHTRNIHRLNGAKVLCSVCGLHVANIYNHMMRHSGEKPYQCTQCSKRFIGKPQLRQHLLVHSGLKPFVCSVCAKAFNNHYNLQVHERIHKGDKCHICTECNKGFLEKSYLKKHMNVHTKVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00956538;
90% Identity
iTF_00627651;
80% Identity
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