Basic Information

Insect: Dynastes hyllus
Gene Symbol: -
Assembly: GCA_029619255.2
Location: JAROYC020000007.1:992361-994244[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7.5e-05 0.0093 17.7 0.6 2 23 262 283 261 283 0.97

2 12 0.0032 0.4 12.6 0.7 1 23 289 311 289 311 0.97

3 12 2.9e-08 3.6e-06 28.5 1.5 1 23 317 339 317 339 0.97

4 12 8.4e-05 0.01 17.6 5.4 2 23 346 367 345 367 0.97

5 12 1e-05 0.0012 20.5 1.6 1 23 372 394 372 394 0.98

6 12 1.2e-05 0.0015 20.2 3.7 1 23 400 422 400 422 0.99

7 12 0.00017 0.021 16.7 2.3 2 23 428 449 427 449 0.96

8 12 2.6e-05 0.0033 19.2 1.3 1 23 455 477 455 477 0.98

9 12 6.9e-05 0.0085 17.9 0.2 1 23 483 505 483 505 0.97

10 12 4.7e-06 0.00058 21.5 0.7 1 23 510 532 510 532 0.99

11 12 1.1e-05 0.0013 20.4 1.1 1 23 537 559 537 559 0.99

12 12 5.1e-06 0.00064 21.4 0.7 1 23 564 586 564 586 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7.5e-05	0.0093	17.7	0.6	2	23	262	283	261	283	0.97
2	12	0.0032	0.4	12.6	0.7	1	23	289	311	289	311	0.97
3	12	2.9e-08	3.6e-06	28.5	1.5	1	23	317	339	317	339	0.97
4	12	8.4e-05	0.01	17.6	5.4	2	23	346	367	345	367	0.97
5	12	1e-05	0.0012	20.5	1.6	1	23	372	394	372	394	0.98
6	12	1.2e-05	0.0015	20.2	3.7	1	23	400	422	400	422	0.99
7	12	0.00017	0.021	16.7	2.3	2	23	428	449	427	449	0.96
8	12	2.6e-05	0.0033	19.2	1.3	1	23	455	477	455	477	0.98
9	12	6.9e-05	0.0085	17.9	0.2	1	23	483	505	483	505	0.97
10	12	4.7e-06	0.00058	21.5	0.7	1	23	510	532	510	532	0.99
11	12	1.1e-05	0.0013	20.4	1.1	1	23	537	559	537	559	0.99
12	12	5.1e-06	0.00064	21.4	0.7	1	23	564	586	564	586	0.99

Sequence Information

Coding Sequence: ATGTcgattgaaattatatttaaggaAGAAAACGATCAAAATGATCTTCCAACCGATATCGAATTTGATTTATCTGACTGCTGTAGAACATGTTTACAACCAGAGTGTTGCTTGACACCAACAAATTCCTCGGATAGCGACTCCATCAAATTCTGTGACAAATTAGCTGCGTGCGTATCAGAAACGATGTGGCCGAAAGAGGGTgaagctttttttatttgtggaatGTGTATAGAAAAGCTGAGAATTGCTTATGATTTTCGAACACTTTGTTTGGAATCAGATCAAGCAGTTCGGTTACAAGTGGAAGCAAATGAAATAGGACGTTATAAGAGTGCAACACTCGATATTACGACAACAACCGTCTCATTAGGATGCGATAAAATTACATGTGAGGAAACGCAACTGCAGCCTTTATCTCAGTCTACCCCAGATACCTCAGCTGCAGTACAATTGGAAGTTACGCAGACATTCGATAATCGTTGTGAGGATGGCTGCGAAgtatgtggaaaaaaattatgcgaACGTATTGATTTCCGAGCAGTCTCTTTAGAATCAAATCAAGTGGTTCGGTTACAAGCGGAAGCAAATGAAATACAAAGTTGTAGGAATGCAAATTCCGATCATACAACAACAACTGCCTTATCGTGTCTTCCACTTGCCTCAGCTGCGGTAAAGTTAGAAGCTACGCAAACACTAGATAATTCTCCTAAACTTGGCTGCCACATTTGCGGAAAAGAACTATGTGAACGTATTGAAAATCACACGGGTGAGAATTATTTGCAATGTTCGATATGCTACAAACAGTTTCCGACAACGGCCAAGTTAATTGTGCATAGGCGAACTCATATTGGGAAGAAGCCGTATGcttgtaatttttgtgaaaGGAAGTATGTTAATGAATCCGATTATCTAGTGCATCGATCTTCACATACAGGAGAGAAACAATTTGCGTGCAGTTATTGTGGTAAAAAGTTTACACGATCTTCCTCTTTAAATCTACATATGAAGATACATACTGACGATAGGCATTGGCAGTGTCACATCTGTAACAAAGTATGTGCAAATTACTCCCACCTTTTGAACCACACGATGACACATACCAGAGAGAAATTCTCCTGCAAGTTATGCAGAAAGGAATTCAAATTTGCCAGTCAATTATCGGTGCATATGCGGGAACACACGGGGAAACAACCTTATAAATGCACATTCTGCGACAAAGTATGCGATCATTCTGCACAATTGCAAGCGCATATGATAAAACATACCGGTGAGAAATTGAGCTGTTCAAAAtgcgataaaaaattttatagcaGTCGTACGTTGAACATACACTTCAAAATTCATACCGgtgaaaatttattcaaatgctCGGATTGTGATTGTGTTTTTCCCATTGCAAGCGAATTAAAGAAACATGCGAAGAGGCACACCGACGAGAGACCTTTTATCTGCGAGATTTGCGGTGGAAAGTTTGCACGACGTGGCGCTTTAACTGTACATAAGAAAAAACATGCTGGTGAGAATTATTCGTGTAAATTGtgtgataaaaagtttacaTGGGCTTCCGCTTTGAATGTACATATGAGAAAGCATACCGGTGAGAAGTATTcgtgtaaattatgtgataaaaagttttcaTATGCTCTTGGTTTAAATGTACATACGAGAACACATACTGGTGAGAAGTattcctgtaaattatgcgaTAAAACGTTTGCATGGGCTTCcactttaaaaatacatatgaaaaCACATACTAGTGAAAAGCCTTAA
Protein Sequence: MSIEIIFKEENDQNDLPTDIEFDLSDCCRTCLQPECCLTPTNSSDSDSIKFCDKLAACVSETMWPKEGEAFFICGMCIEKLRIAYDFRTLCLESDQAVRLQVEANEIGRYKSATLDITTTTVSLGCDKITCEETQLQPLSQSTPDTSAAVQLEVTQTFDNRCEDGCEVCGKKLCERIDFRAVSLESNQVVRLQAEANEIQSCRNANSDHTTTTALSCLPLASAAVKLEATQTLDNSPKLGCHICGKELCERIENHTGENYLQCSICYKQFPTTAKLIVHRRTHIGKKPYACNFCERKYVNESDYLVHRSSHTGEKQFACSYCGKKFTRSSSLNLHMKIHTDDRHWQCHICNKVCANYSHLLNHTMTHTREKFSCKLCRKEFKFASQLSVHMREHTGKQPYKCTFCDKVCDHSAQLQAHMIKHTGEKLSCSKCDKKFYSSRTLNIHFKIHTGENLFKCSDCDCVFPIASELKKHAKRHTDERPFICEICGGKFARRGALTVHKKKHAGENYSCKLCDKKFTWASALNVHMRKHTGEKYSCKLCDKKFSYALGLNVHTRTHTGEKYSCKLCDKTFAWASTLKIHMKTHTSEKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627500;
90% Identity: iTF_00627500;
80% Identity: -