Basic Information

Insect: Dynastes hyllus
Gene Symbol: -
Assembly: GCA_029619255.2
Location: JAROYC020000003.1:1541125-1542894[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.4 3e+02 3.5 5.5 3 23 175 195 174 195 0.88

2 15 4e-05 0.005 18.6 1.1 1 23 201 223 201 223 0.98

3 15 0.12 15 7.6 3.8 1 12 229 240 229 243 0.87

4 15 0.0037 0.46 12.4 0.5 2 17 254 269 253 270 0.91

5 15 0.0014 0.18 13.7 0.3 2 23 282 304 281 304 0.95

6 15 0.00013 0.016 17.0 4.6 1 23 310 332 310 332 0.97

7 15 4.9e-06 0.00061 21.5 2.1 1 23 338 360 338 360 0.98

8 15 0.00041 0.05 15.4 5.9 1 23 366 388 366 388 0.98

9 15 4.5e-05 0.0056 18.4 1.1 1 23 394 416 394 416 0.98

10 15 5.6e-05 0.0069 18.1 0.4 1 23 422 444 422 444 0.99

11 15 7e-06 0.00086 21.0 1.5 1 23 450 472 450 472 0.98

12 15 1.3e-07 1.6e-05 26.4 0.4 1 23 478 500 478 500 0.99

13 15 3.2e-06 0.0004 22.0 3.4 1 23 506 528 506 528 0.98

14 15 0.0012 0.14 14.0 2.5 1 23 534 556 534 556 0.98

15 15 6e-06 0.00075 21.2 1.7 1 23 562 584 562 584 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.4	3e+02	3.5	5.5	3	23	175	195	174	195	0.88
2	15	4e-05	0.005	18.6	1.1	1	23	201	223	201	223	0.98
3	15	0.12	15	7.6	3.8	1	12	229	240	229	243	0.87
4	15	0.0037	0.46	12.4	0.5	2	17	254	269	253	270	0.91
5	15	0.0014	0.18	13.7	0.3	2	23	282	304	281	304	0.95
6	15	0.00013	0.016	17.0	4.6	1	23	310	332	310	332	0.97
7	15	4.9e-06	0.00061	21.5	2.1	1	23	338	360	338	360	0.98
8	15	0.00041	0.05	15.4	5.9	1	23	366	388	366	388	0.98
9	15	4.5e-05	0.0056	18.4	1.1	1	23	394	416	394	416	0.98
10	15	5.6e-05	0.0069	18.1	0.4	1	23	422	444	422	444	0.99
11	15	7e-06	0.00086	21.0	1.5	1	23	450	472	450	472	0.98
12	15	1.3e-07	1.6e-05	26.4	0.4	1	23	478	500	478	500	0.99
13	15	3.2e-06	0.0004	22.0	3.4	1	23	506	528	506	528	0.98
14	15	0.0012	0.14	14.0	2.5	1	23	534	556	534	556	0.98
15	15	6e-06	0.00075	21.2	1.7	1	23	562	584	562	584	0.98

Sequence Information

Coding Sequence: ATGGCCACAAAATATGATGAAAATTATGATAATAACTTTGAAGAATATAATAGTAACACAGACATGAAATTAGGAGATTTTCTCGATTCAAAAGaaggaatatctttgataagcgACGCCAACGTAGCTCAATGTatcttattggaaaatattaaggATGAATATTTGAACGAGCAGTTAAGCAAAGATGTTGGTAGTACCGAGAACCGTGAAAAGTATAATAGTGACGCagatattaaattagaagattttatagttcaagcgggagattttcttgattcaaaaatGGGAATATCATTGATAAACGACGCCAACGTAGCACAAGATGTTTATAGTGCTGAAAACTATGAAGTtggtttagaaaaaatagaaattacaaaGGTAGAAATATGCGCGAAAAATGAGAATGTGCCAACGTTACAACAGGATCCACTGTTGGAAGATAACCAAAGCCATGGATTAAGTTTAAAAGAGAATTCAACGCATACGTCTGGAAGAAAAAGTAACGGTAGAATagttttctgcaaaaaatgtaacagaacgtttaattatcgttattatcaTTCCATTCATGTCCATATCCATGCTGGAAATATTCCATACAAATGCGACATCTGCCAAGAAGGTTTTGCAACATCATAcctctttaaaaaacataaaatttcacATACCATGGGCATATCATATTCATGCAAAACTTGTGGGAAATGCTTCACAGAGAGAAGAGATTGTACAAAGTACTCCGGCGGTAGATCTTTGCCTTGTGACCAATGCGATAAAAGCTTTAAATACAAAGATAAACTAAAAGCTCGCAAGGTCTTTCATAAGATCGACAAGATTGTTGTTTGTGTGCAATGTGGAAAATCGTTCGAAGGGAAAATGAAACTATATCAACATTTTAGGAGCGTACATTTAGTCAAGAAGGTTCACATATGTAGTTATTGTTGGCGGACATATCATCGCAAGATAGATCTAACGAATCATATTAgaacacacaccggtgaaaagccctttacttgcgaaatttgtgaaaaatcatTTTATCTGAGGAGTACACTaaaaagtcatattaaaagacactccggtgaaaagccttttacttgcgatgTTTGTAAAAGATCGTTTTGTAGGAAAAATGTACTGATGAAGCATTTTAaaacacacaccggtgaaaagccttttacttgcgaagtttgtaaaatgtcattttgcGACAGGAGTGGATTAGCAGGTCATATTCAAAAACACACTGGTGaaaggccttttacttgcgaagtttgtGAAAAGTCATTTAGTTGGAAAAGAGGATTGATGGttcatattaaaacacacactggtgaaaagccaTTTAATTGCgggatttgtaaaaagtcattctACGAGAAAAGTGGACTGACGACTCATATTAAAAGACACAGCAATGAAAAGCGGtttacttgcgaagtttgtGGAAAGTCATTTAATGTGAGGGATGGACTGATGAGacatattaaaacacacaccggtgaaaaaccttttacttgtgaagtttgtaaaaaatcgttttctagGAAAAGTGTATTGATGAAGCATTTTAAAACACACACTGGTGAGAAGCCTTTCACTTGTGACGTCTGTAAAATGTCATTTGGCTGCTCTTCGCTACTAAAAAGACATATGACAGTGCATATGGGGGATTGCCCTTATTCTTGTGAGTTGTGTTCAGCTAAATTTAAGAGTTCACAAAATCTAACACGGCATATGAAgctgcatattaaaaaagaagtcTAA
Protein Sequence: MATKYDENYDNNFEEYNSNTDMKLGDFLDSKEGISLISDANVAQCILLENIKDEYLNEQLSKDVGSTENREKYNSDADIKLEDFIVQAGDFLDSKMGISLINDANVAQDVYSAENYEVGLEKIEITKVEICAKNENVPTLQQDPLLEDNQSHGLSLKENSTHTSGRKSNGRIVFCKKCNRTFNYRYYHSIHVHIHAGNIPYKCDICQEGFATSYLFKKHKISHTMGISYSCKTCGKCFTERRDCTKYSGGRSLPCDQCDKSFKYKDKLKARKVFHKIDKIVVCVQCGKSFEGKMKLYQHFRSVHLVKKVHICSYCWRTYHRKIDLTNHIRTHTGEKPFTCEICEKSFYLRSTLKSHIKRHSGEKPFTCDVCKRSFCRKNVLMKHFKTHTGEKPFTCEVCKMSFCDRSGLAGHIQKHTGERPFTCEVCEKSFSWKRGLMVHIKTHTGEKPFNCGICKKSFYEKSGLTTHIKRHSNEKRFTCEVCGKSFNVRDGLMRHIKTHTGEKPFTCEVCKKSFSRKSVLMKHFKTHTGEKPFTCDVCKMSFGCSSLLKRHMTVHMGDCPYSCELCSAKFKSSQNLTRHMKLHIKKEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -