Dhyl025570.2
Basic Information
- Insect
- Dynastes hyllus
- Gene Symbol
- -
- Assembly
- GCA_029619255.2
- Location
- JAROYC020000007.1:998020-1004389[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 3.8 4.8e+02 2.9 0.4 3 23 33 54 32 54 0.94 2 16 5e-06 0.00062 21.4 0.1 2 23 225 246 224 246 0.97 3 16 0.0011 0.14 14.0 2.6 1 23 252 274 252 274 0.97 4 16 3.8e-05 0.0047 18.7 0.7 1 23 280 302 280 302 0.98 5 16 2.1e-06 0.00026 22.7 2.1 2 23 309 330 308 330 0.97 6 16 4.5e-06 0.00056 21.6 0.6 1 23 336 358 336 358 0.97 7 16 3.1e-05 0.0038 19.0 3.9 2 23 365 386 364 386 0.98 8 16 0.0026 0.32 12.9 2.2 1 23 391 413 391 413 0.97 9 16 9.8e-06 0.0012 20.5 2.2 1 23 419 441 419 441 0.98 10 16 0.0014 0.17 13.8 7.8 2 23 447 468 446 468 0.96 11 16 1.8e-05 0.0022 19.7 0.2 1 23 474 496 474 496 0.98 12 16 2.3e-05 0.0029 19.3 0.0 1 23 502 524 502 524 0.98 13 16 6.8e-06 0.00084 21.0 0.6 1 23 529 551 529 551 0.99 14 16 0.024 3 9.8 0.8 1 23 556 578 556 578 0.97 15 16 0.0005 0.062 15.1 0.6 1 23 583 605 583 605 0.98 16 16 2e-05 0.0025 19.5 0.3 1 23 610 632 610 632 0.98
Sequence Information
- Coding Sequence
- atggagaagaagcgaaaaatagacagtgaatgcagaacattcaaagatcaatggaagtatcaatatttcgtgatcgagtccagtaataaggcgctatgtttgatttgcaatgaaaccgttctcaaagaatataacattaaacgtcactatgaaacgaaacattttcaaaatgacTCGGGAAGTTTGCGGagagaaaaatttgaagctttgaagCGTGGATTGAAATCGCAGCAATCTTTGTTAATAAAAGTCAACACTGAACAAGAGGCTGCAACTCGTGCCAGCTTTCGTGTGGCTCTTGAAATCGCAAAACGTGGAAAACCATTCACCGATGGAGAAATCATCAAAGAATGCGTAATTGCCGTAGCCGAAGAAATGTGCCCCGAAaagataaatttacttaaaactgtcAGTTTGTCAGCAAACACCGTGGCTGGGAGGGAGTGCAACCCGACTTCGCCAACGGCTATCGTAGGATCCGGGGAAGTTATTTTAAGGACAAAATCTGTGAAAACGCAAAAGCAGTCTTTACCCCAGTGTCCCCCGCTTACCTTAGCAGCGGTAGAATTAGAAGTCAAACGAATACTAGATAATCCTCCTAAACTTGGCTGCCAAATTTGCGGAAAAGAATTATGTGAACATATTCGAAATCACACAGCCGAGAAGTGTTTGCGATGTTCGGTATGCCCTAGACAGTTTGCGACAGCAGCCAAGCTAATCGTGCATATGCGAACTCATATTGGGAAAACGTTGTATGCTTGTAATTTTTGCGAGAAGAAGTACGTTAAGAAATCTGATTTCCTGGTACATATACATTCACATACGGGAGAGAAATCATTTGAATGTAATTATTGCGATGATAAGTTTATTAAGAGATCCGAATTGACTGATCATTTAAGAATTCATTTCCATGAAAGTTCATTAAAATGTTCGTATTGTGACCATACTTTTACGCGACCAAACGAGTTGAGGCAACATGTAAGGATTCACACTGGTGAGAAGCCCTTTGATTGTGAAATTTGCGGTAAAAAGTTTACGCTCTCTTCCGGTTTAAGTGCGCATAAGAAAACGCATACTGGCGTTAAACGTTCGCAGTGCCACATCTGTAAAAAATCGTATAGTGGATCCTTTCAACTCTCAAAGCACATGATGAAACATACCGGAGAGAAGTTCTCGTGTAACTTCTGCAGAAAAGAGTTTAATCTTTACTCTCAACTACTAATCCACAAACGGGAGCACACAGGAAAGCAACCGTTTAAGTGTACTCTTTGCGAGAAAGTATGCGATAATTCTAGCCAGTTGAAAGCGCACATGGTGAAGCATACTGGTCAGAAATTGAGCTGTTCAAAATGCGATAAAACATTTTGTCACAGGCGTACGTTGAACACCCATTTTAAAATTCACACCGgcgaaaatttattcaaatgctCGGATTGCGATAGTGTTTTTCCCGTTGCAAGCGAATTAAGGAAACACGCGAAGAGGCACACCGACGAGAGACCTTTTATCTGCGAGATTTGCGGTGGAAAGTTTGCACGACCTGGCGCTTTAACTGTACATCTGAAGAAACACGCTGGTAAGAATTATTCGTGTAAAGTATGCGATAAAAAGTTCGCATGGGCTTCCACATTAAATGTACATATGAGAAAGCATACTGGTAAGAAGTATTCGTGTAAATTGTGCGACGAAAAGTTTTCATGCGCCCCCGCTTTATATGCACATAAGGCAACACATACTGGTAAGAAGTATTCGTGCAAATTGtgcgataaaaaattttcatgggCTACCGCTGTACGTTTACATATGAATACACATACTACTGTGAAGTACCCTTGCGAATTGTGTGATAAAGAGTTTTCATGGGCTTCCACATTAAAGATTCATATGAAGAAAcatacttaa
- Protein Sequence
- MEKKRKIDSECRTFKDQWKYQYFVIESSNKALCLICNETVLKEYNIKRHYETKHFQNDSGSLRREKFEALKRGLKSQQSLLIKVNTEQEAATRASFRVALEIAKRGKPFTDGEIIKECVIAVAEEMCPEKINLLKTVSLSANTVAGRECNPTSPTAIVGSGEVILRTKSVKTQKQSLPQCPPLTLAAVELEVKRILDNPPKLGCQICGKELCEHIRNHTAEKCLRCSVCPRQFATAAKLIVHMRTHIGKTLYACNFCEKKYVKKSDFLVHIHSHTGEKSFECNYCDDKFIKRSELTDHLRIHFHESSLKCSYCDHTFTRPNELRQHVRIHTGEKPFDCEICGKKFTLSSGLSAHKKTHTGVKRSQCHICKKSYSGSFQLSKHMMKHTGEKFSCNFCRKEFNLYSQLLIHKREHTGKQPFKCTLCEKVCDNSSQLKAHMVKHTGQKLSCSKCDKTFCHRRTLNTHFKIHTGENLFKCSDCDSVFPVASELRKHAKRHTDERPFICEICGGKFARPGALTVHLKKHAGKNYSCKVCDKKFAWASTLNVHMRKHTGKKYSCKLCDEKFSCAPALYAHKATHTGKKYSCKLCDKKFSWATAVRLHMNTHTTVKYPCELCDKEFSWASTLKIHMKKHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -