Dhyl010652.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dynastes hyllus
Gene Symbol
-
Assembly
GCA_029619255.2
Location
JAROYC020000003.1:1146264-1148360[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0008 0.099 14.5 0.4 2 23 215 237 214 237 0.95
2 17 8.3e-05 0.01 17.6 5.4 1 23 243 265 243 265 0.98
3 17 2e-06 0.00025 22.7 1.1 1 23 271 293 271 293 0.98
4 17 0.00018 0.022 16.5 0.7 2 21 301 320 300 321 0.94
5 17 0.00012 0.015 17.1 0.5 2 23 321 342 321 342 0.97
6 17 3.1e-07 3.8e-05 25.3 2.3 1 23 348 370 348 370 0.98
7 17 1.4e-07 1.7e-05 26.4 0.9 1 23 376 398 376 398 0.98
8 17 2.3e-05 0.0029 19.3 1.0 1 23 404 426 404 426 0.97
9 17 8e-08 9.9e-06 27.1 1.0 1 23 432 454 432 454 0.99
10 17 5.2e-06 0.00064 21.4 0.7 1 23 460 482 460 482 0.98
11 17 9.9e-05 0.012 17.4 0.5 1 23 488 510 488 510 0.98
12 17 2.9e-08 3.6e-06 28.5 2.3 1 23 516 538 516 538 0.99
13 17 0.00054 0.067 15.0 2.3 1 23 544 566 544 566 0.99
14 17 4.2e-06 0.00052 21.7 0.4 1 23 572 594 572 594 0.98
15 17 4e-05 0.0049 18.6 1.8 1 23 600 622 600 622 0.99
16 17 0.00058 0.072 14.9 3.6 1 23 628 650 628 650 0.98
17 17 0.00051 0.064 15.1 2.9 1 23 656 678 656 678 0.97

Sequence Information

Coding Sequence
ATGGCCATGGAGTTCCATGAACAACAAAGTAATGACTTTGAATATAGTAGTGACATAGGCATCAAATTAGGAAATGTAGTCCAAACtggagattttcttgattcaaaaacgggaatatctttgataagcgACGAAAACGTCGCGCAATGtgtcttattaaaaaatattaaagttgaaaatttggatGAGCAATTAAGTAAAGATATTGGTAGTACAGAGAACagtgaaaaatataattgtgACGCAGACATTAAATTGGAAGAACGTATAGATCAAACgggagattttcttgattcaaaagctggaatatctttgataagcgACGACATCGTAGCGCAAGATGTCtctttggaaaatattaaagttgaaaatttggacGAGCAGTTAAGCAAAAATATTGGTAGTACAGAGaagtatgaaaaatataatggtgacgcagacattaaattagaagattgtAAAATTCAAACGGGAGATTCtcttgattcaaaagcaggaatatcttTAGTAAACGGAGACACTCAAGATGTCCTATTggagaatattaaaattgaaaatttaaacgagcaaaccaataaaagttttaaatacaatCATGAACCAAAAGCTTACAAGGTCTTTGGTAAGCTCAACAAGGTTGTTGTTTGCGCGCAATGTGGAAAATCGTTCGAAGGGAAAAACAAACTATACCAACATTTCAGAAGCGTACATTTTACCAGGAAACTTCATTCATGTAGTTATTGTGAGCGGACATGTAGTGGCAAAAATGATCTGACGAGACATATTAGAACACATACTGGTGAAAAGCCatttacttgcgaaatttgtaaaaaatcattttctctgAAGAGTGGACTGGTGACTCATATTAAAAGACACGCCGGTGAAAAGCCGGCCATTACTTGCGAGATTTGCAAGAAGTCGTTTTCCAAGAAGAATAGACTGATCACTCATATTAAAtcttgcgaagtttgtaaaatgtcattCTGTGGCAGGAGTGCACTGGCAAGTCATATGATAACACACACTGGTGGAAAGCCTTTTTCctgcgaagtttgtaaaaaatcattttcttcaaaGAACGAACTGAGGACGCATATTAGAAAACACACCGGTGAAAGGCCTTTTAtttgcgaagtttgtaaaaagtcattttctcaGAAGAGTGCACTGAGGAcacatattaaaatacacaccggtgaaaagccttttgcTTGCGAAGTTTGTAAGCAATCGTTTTCTCTAAAAAGTAGACTGATGATTCATATGAAAACACATACCGGTGAAAAGATTTTTACTTGCGAAGTGTGTGGAAAATCATTTTCTCTGAAAAGTAGACTGATACGTCATATTAgaacacacaccggtgaaaagccttttacttgcgagatttgtaaaaagtcatttgcTGAGAAGATTACACTGAGAACCCATATTAAAATTCACAGCgatgaaaagccttttacttgtggagtttgtaaaaaatcattcaattGGAGGGGAGGACTGAGGAgacatattaaaatacacaccggtgaaaagccttttacttgcgagatttgtaaaaaatcattttcttcgaAGAACGCACTGAAGAAACATATTAGAACACActccggtgaaaagccttttacttgcgaagtttgtaGAAAGTCATTTTGTTGGAGGAAAGGACTGATGGCACATATTAAAACGCATACCACTAAAAAGCTTTTTACTTGCAAAGTTTGTGAAAAGTCATTTTCTGAGAAGGGTGAACTGGCGACGCATATTAAAGAACACGCCGGTGAAAAGCGTTTTACTTGCGAGATATGTGGAAAGTCTTTTTGTTGGAGGAACGGACTGATGACGCATATTAAAACGCATAGCAGTGAAAAACCGtttacttgcgaagtttgtaaaatgtcGTTTTGTGCGAGGGCTCGACTGAAAAGACATATTAAGAAACACAGTGGTGAAAAACCTTTTGCGTgcgaattttgtaaaaaatcattttgttggAAAGAAGGACTGATGAGACATATTAAAACGCATGCGGGTGGAAAGCGTCTTACtgcgaaatttgtaaacagTCAGTTGGTTGCTCTTCAGACCTAA
Protein Sequence
MAMEFHEQQSNDFEYSSDIGIKLGNVVQTGDFLDSKTGISLISDENVAQCVLLKNIKVENLDEQLSKDIGSTENSEKYNCDADIKLEERIDQTGDFLDSKAGISLISDDIVAQDVSLENIKVENLDEQLSKNIGSTEKYEKYNGDADIKLEDCKIQTGDSLDSKAGISLVNGDTQDVLLENIKIENLNEQTNKSFKYNHEPKAYKVFGKLNKVVVCAQCGKSFEGKNKLYQHFRSVHFTRKLHSCSYCERTCSGKNDLTRHIRTHTGEKPFTCEICKKSFSLKSGLVTHIKRHAGEKPAITCEICKKSFSKKNRLITHIKSCEVCKMSFCGRSALASHMITHTGGKPFSCEVCKKSFSSKNELRTHIRKHTGERPFICEVCKKSFSQKSALRTHIKIHTGEKPFACEVCKQSFSLKSRLMIHMKTHTGEKIFTCEVCGKSFSLKSRLIRHIRTHTGEKPFTCEICKKSFAEKITLRTHIKIHSDEKPFTCGVCKKSFNWRGGLRRHIKIHTGEKPFTCEICKKSFSSKNALKKHIRTHSGEKPFTCEVCRKSFCWRKGLMAHIKTHTTKKLFTCKVCEKSFSEKGELATHIKEHAGEKRFTCEICGKSFCWRNGLMTHIKTHSSEKPFTCEVCKMSFCARARLKRHIKKHSGEKPFACEFCKKSFCWKEGLMRHIKTHAGGKRLTAKFVNSQLVALQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-