Dhyl022000.1
Basic Information
- Insect
- Dynastes hyllus
- Gene Symbol
- -
- Assembly
- GCA_029619255.2
- Location
- JAROYC020000005.1:51333117-51334768[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.1 5e+03 -1.0 0.2 19 26 174 181 173 188 0.86 2 13 0.072 1.7e+02 3.7 0.8 18 38 191 212 183 213 0.81 3 13 0.11 2.7e+02 3.1 0.6 14 40 227 250 220 253 0.75 4 13 0.0043 10 7.6 2.9 15 40 256 278 247 281 0.76 5 13 0.0024 5.8 8.4 3.3 9 44 279 309 275 309 0.85 6 13 0.00042 1 10.8 7.1 4 38 301 335 300 336 0.84 7 13 0.011 28 6.2 0.8 15 41 338 361 333 364 0.77 8 13 0.0025 6.1 8.3 4.5 6 35 358 383 357 391 0.70 9 13 0.048 1.2e+02 4.2 2.0 10 29 390 407 383 418 0.78 10 13 0.0064 15 7.0 3.6 17 41 423 444 412 446 0.81 11 13 0.25 6e+02 1.9 2.4 13 29 446 462 439 472 0.77 12 13 0.00073 1.8 10.1 3.4 8 38 470 500 463 501 0.73 13 13 0.03 74 4.9 0.1 19 41 508 527 502 529 0.85
Sequence Information
- Coding Sequence
- ATGTCAGTCCAAATTAAATTCGAGGAGGAAACCAATTTAAATGACGCCATAACCGATACCGTATTTAATTTAACTGACTGCTGTAGAACATGTTTACGACTTGACTCTTTCTTGACACCAACAAATTCCTCCGATAGCGACTCCATAAAATTCTGCGACAAATTAGCGGCTTGTGTATCAGGAATGATGTGGGCAATAGAACGTGTGCCTTCATTTATTTGTGAAGTATGTATAGAAAAACTAAGAATTGCCTATGATTTCCAAATAGTTTGTTTACAATCAGATCGAGCACTGCAATTACAAGGAGAGATAAAACAAGTACAAAGCTCTAGGAGTGCAACTCCGGATCCTATGATGATAACTGGCTTAGCAGGATGTGACGAAACGATAGAGCAAGTTATCTTAAATATCAAATCTGAGGAAACACAAGTGCAGTCTTCACCTCAGTGCGCTCTACCTACATCAGCTGTAAAACAATTGGAACCTACGCAGATACCCAGTAAGGCCCCTGAAGGCGGCTGCCAAGTTTGCGGAAAGGAATTATGCGAATATACAGGAGAGACACCATTTGCATGTAGTTATTGTGATGAAAAGTTTACTGCAAAATGCCTATTGAGCTCCCACTTAAAAATTCATACTGGCGATAAACTTTCGCAAAATCAAATCTATAATAAAAGTGGaaagaagttttcctgtaagtTATGCGGTAGAAGCTTTAGATGGTCATCCTCTTTCAATGCACATATGAAAACACATAATGGTGGTAAACGTTGGTCATGTCAATTCTGTAATAAATCATATACACAATCCTCCTATCTTACGGAGCACATGAGCACACATACCGGAGAGAAGCTTTCATGTAAATTATGCGATAAAAAGTTTACATGGTCTGCCTCTTTATACGCACATATGAGAAGACATCACCCTGATAAACTTTGGCGATGTAAAATCTGTAACAAATCATATACACAGTCTTCTTACCTTACAGAGCACATGATGCAACATACcggagagaagttttcctgtgAAGTATGCGGTAAAAAGTTTAAATGGTCTTCCTCTTTAGGTAAACATATGAAAAGACATAGCCCTGATAAACTTTGGCGATGTAAAATCTGTAATAAATCCTATACACAATCCTGGCTCCTTAGAGACCACATGAAGACgcatactggagagaagttcTCATGTAAATTCTGTCATGAGGAATTTAGATATCATTCTCAATTATTAATCCACAGGCGAGAACACACAGGAAAACAACCATATAAGTGCAAGCTCTGCGGCAAAATATGCAACTATTCCTCAGAATTGCTAACACATATGGTGACTCATACTGGTGAGAAATTAACATGTTCAATGTGCGATAAACAGTTTACCACCAAATACAAGTTGAACCGCCACATAAAAATTCATACCGGCAGAAATATATTCAACTGCTCGATTTGTGAACGTACTTTTTCAGAATCAGGtaacttaacgaaacatatgAGGACGCACACTGGTGAAAAACCCTTTGGTTGTAAACTTTGTGATAAAAAGTTTGCACAATCCTCCTATTTAAATGCACATATGAAAAGACATGCCGGGAAAACATCTTAG
- Protein Sequence
- MSVQIKFEEETNLNDAITDTVFNLTDCCRTCLRLDSFLTPTNSSDSDSIKFCDKLAACVSGMMWAIERVPSFICEVCIEKLRIAYDFQIVCLQSDRALQLQGEIKQVQSSRSATPDPMMITGLAGCDETIEQVILNIKSEETQVQSSPQCALPTSAVKQLEPTQIPSKAPEGGCQVCGKELCEYTGETPFACSYCDEKFTAKCLLSSHLKIHTGDKLSQNQIYNKSGKKFSCKLCGRSFRWSSSFNAHMKTHNGGKRWSCQFCNKSYTQSSYLTEHMSTHTGEKLSCKLCDKKFTWSASLYAHMRRHHPDKLWRCKICNKSYTQSSYLTEHMMQHTGEKFSCEVCGKKFKWSSSLGKHMKRHSPDKLWRCKICNKSYTQSWLLRDHMKTHTGEKFSCKFCHEEFRYHSQLLIHRREHTGKQPYKCKLCGKICNYSSELLTHMVTHTGEKLTCSMCDKQFTTKYKLNRHIKIHTGRNIFNCSICERTFSESGNLTKHMRTHTGEKPFGCKLCDKKFAQSSYLNAHMKRHAGKTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00627489;
- 90% Identity
- iTF_00627489;
- 80% Identity
- iTF_00626397;