Basic Information

Gene Symbol
NCOR1
Assembly
GCA_029619255.2
Location
JAROYC020000013.1:2121023-2122500[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-08 5.4e-05 24.6 0.0 4 43 101 140 99 142 0.98

Sequence Information

Coding Sequence
ATGAGAAAGGGTAGCAGGAAGTTAATTTCTATTAGAGCACCTTTTCAACGAAAATGGAGCTGCGTCGTTCTTGCAGCAAGATTTAACAGAGTCGGCGCGCGCATAAAATCCGAAGCGGACCTGGAAGAGATCATGGATAACCTGCAAGAGCAGGTGCTTGAAGATAAGAAAATGCGTAGCTACGCGGTGATACCGCCGATTATGTTAGACGCCAAAGAACGAAAGCACGTCTACCAGAACAACAACGGTCACATATTAGACATGGAAGCCGTCCATAAAAGCAGGCAGTTCCTCAACATCTGGACCGCCGCCGAAAAGGAGATCTTCAAGGAGAAGTACCTGCAACATCCCAAGAATTTTTATCTGATAGCCTCCTTTCTGGATAAGAAGTCGGTGGCGGATTGCGTCCAGTACTACTATCTAAGCAAGAAGACGGAGAACTACAAGCAGCTGTTGAAACGGTCGCGGCAAAGGACGAGACATCGGCCGCAGAAGACTACGGCGGGTGTCGATAATCTACCACCGGGTGTCGTTACTAGACATCAGAAGGAGCAGCAAGCTTTAAAGACTGTGGCGCAGCAGAATTACGAGGGCATTGACAATAATGTTACTACATCTTCCAGTAGCGTGGCCGGAAGTATAACGACTTTTACGGTTTCTTCGACGAATAACAACAATGGTAACAATAATGCGACTAACAACAGTTCAACAGCGCTGACGCCTACTAGCAATAGTGTTACTTCGTCCTCGTCGTCACCGGCGCCCGCCTCAACCCCAAGCACCGTTATATCGAACAATAACGGTGGCAGTGCGACTAACGTGACGTCAGCGAACACCACCGCGTTAGTCATGGCCAAGATGGACGTGATGGAAAGTGGCGGCGAAGAGACTAAAAGTGAATCGAACAACTCCGAGAAGAAGCTCTTACAGGACATCGTGGTTAAAGTGGAGAATACGTCCAGTAACGAAGGAAGCAACAGCGACGCGGTGGTTGGCAGCATTGCCATCATTAAGAAGGAGGACATCAAGAAAGAGGATATCGTCATGGTTAAGAAGGAGGATATCGTTATCAAGAAAGAAGATAGCGTTACGGAGAATTACGGAAGGTAA
Protein Sequence
MRKGSRKLISIRAPFQRKWSCVVLAARFNRVGARIKSEADLEEIMDNLQEQVLEDKKMRSYAVIPPIMLDAKERKHVYQNNNGHILDMEAVHKSRQFLNIWTAAEKEIFKEKYLQHPKNFYLIASFLDKKSVADCVQYYYLSKKTENYKQLLKRSRQRTRHRPQKTTAGVDNLPPGVVTRHQKEQQALKTVAQQNYEGIDNNVTTSSSSVAGSITTFTVSSTNNNNGNNNATNNSSTALTPTSNSVTSSSSSPAPASTPSTVISNNNGGSATNVTSANTTALVMAKMDVMESGGEETKSESNNSEKKLLQDIVVKVENTSSNEGSNSDAVVGSIAIIKKEDIKKEDIVMVKKEDIVIKKEDSVTENYGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00627138;
90% Identity
iTF_00627138;
80% Identity
iTF_00627138;