Dhyl038855.1
Basic Information
- Insect
- Dynastes hyllus
- Gene Symbol
- -
- Assembly
- GCA_029619255.2
- Location
- JAROYC020000012.1:10294504-10296144[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-07 0.00035 21.6 0.0 5 39 1 36 1 42 0.90 2 2 4.2 1.7e+03 0.2 0.0 24 39 104 119 104 122 0.88
Sequence Information
- Coding Sequence
- ATGGCGAAGGCTTTGAGaaatgttcaagaaaaaaaGATGGGATGGCAATTAGCGTCGAAAACCTTCAAAGTTCCTGCTAGAACACTACGCGGAAGATCCAAAAACAATTGTAACAGTGCAAAAGAAGATTTGGGGGATAAAAGACCAGTATTTAGTCGGGAGATGGAAGATGAATTTGCTCAACATATATCTCTTAGAAGGCCTGAAAACACCTCGGCTGCTCGGTCACAAGCTTTCAATAAAGATAATAtcgctttatattttaaatctctcAATGaggttatggaaaaatataaGTTTCCACCAGAAAATATCTACAACGTCGACGAATCTAGTCTCAGTAGAGTACAAAAACGATCACAAAATATTCTCGCTACAAAGGGACGAAAGCAAGTTGGAGCGGTGTCTGGTGCCGAACGAGGACAGCATTTAACTGAGGTATGCTGTATGAATGTCATGGACACGTTTGTGCCACCAGACTTTATACTCCCAAGAAAAAGAGTGAAAAATGAGCTGATGGACAACGCTCCAATAGGCAGCAAAGCTTATTGTCAACAAAACGGTTGGATGTGTTCGGAGATTTTTGTACAATGGTTGGAACATTTTGTACATTACACTAAAGCTTCGAATGAAAACAAGGTTCTCCTCTTTTTGGACGGCCACGGTAGCCACAAAAGCCTAAAAGTGCTACAATACGCTAAAGATAATGTCCCTGGATGTAGGTTTTTGTTTCACCTCTTCAAACTTATTACGGCCAAGAATCCTGGCAGAATCGTCACACATTTCCAAGTAGCTGGTTTTTTCAATAAAGCTTATTTGAAAGCTGCTACACCCGCAAATGCAGTACACGCTTTTGCCAAAACAGGAATATATTTCTTCGACGACAACATCTTTCCAGAGTGGATGTTCCAGCCCTTTTCCACAACTGATAGACCGTTAACCGAACAAGACCAATGCCGAAATGATCAAGAACTACCACAACAAGGAGGCGTAGACGTTGAACTGCCTAAATCATCTGGAACACCAGAACCTACTGAAGTTGAACCTTCAACATCAAGATTTCCCAAAGCTAAATCCACGACAGAAAGATTTCCTTCACCCAGGAAACGGAGCATCAAAGAAAAGATTAAGCAAACCAAGCAAAAAGGACATATAAATTTCACGCCAGACATTGATCAATTGGAAAggcaagaagaagaaaaggcaagaaaggaaagggaaaagttatcaagaaaagcaaaaaagaagatTTTGGTTGAAGAAGAAAAGGACGATGTTAGCGACGATGAAGGGGTTGAAGACATTGATGACGATGAAGCCGATGCTGCATGTTTATATTGCAATGATGTGTTATCTAGGTCGAAAACAAGAGAAATGTGGATTTTATGCTAG
- Protein Sequence
- MAKALRNVQEKKMGWQLASKTFKVPARTLRGRSKNNCNSAKEDLGDKRPVFSREMEDEFAQHISLRRPENTSAARSQAFNKDNIALYFKSLNEVMEKYKFPPENIYNVDESSLSRVQKRSQNILATKGRKQVGAVSGAERGQHLTEVCCMNVMDTFVPPDFILPRKRVKNELMDNAPIGSKAYCQQNGWMCSEIFVQWLEHFVHYTKASNENKVLLFLDGHGSHKSLKVLQYAKDNVPGCRFLFHLFKLITAKNPGRIVTHFQVAGFFNKAYLKAATPANAVHAFAKTGIYFFDDNIFPEWMFQPFSTTDRPLTEQDQCRNDQELPQQGGVDVELPKSSGTPEPTEVEPSTSRFPKAKSTTERFPSPRKRSIKEKIKQTKQKGHINFTPDIDQLERQEEEKARKEREKLSRKAKKKILVEEEKDDVSDDEGVEDIDDDEADAACLYCNDVLSRSKTREMWILC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -