Dhyl011014.1
Basic Information
- Insect
- Dynastes hyllus
- Gene Symbol
- -
- Assembly
- GCA_029619255.2
- Location
- JAROYC020000003.1:5456470-5456922[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-12 4.7e-10 40.4 0.0 2 38 17 53 16 59 0.88 2 2 9.9 4.1e+03 -1.0 0.0 14 22 140 147 134 147 0.73
Sequence Information
- Coding Sequence
- ATGCCCACGCATTATAAGCGCAAATGCCCAGAAAGAGGTAAATGGACCTCAGATCAACTACAGCGAGCACTGGCTGCAGTTAATGAGGGTTTAATGGGCGTAAACGAAGCCAGTCGTACATACGGGGTTCCTTCAAGAACACTGCGAAGAAGGCGACAACAAGATAACGCAGAAAAGGTACAGATGGGACCATCATCATTATTTGGAAAAGCAAATGAGACAAAACTAGTCCAACACATTCAGAAATTACAGTCAAGGGGGTTCTCTCCAACCAGGTTCGACGTTAGGAAAATTGCATACAAATTTGCCGAAGCCTTAAAaatcaaacataattttaacaaagaaaaggAGATCGCCGGATACGATTGGCTACATAGCTTTCTGCGTCGAAACCCAATCCTTACAGTGCGTAAGGCGGAAGGAATGTCTTCGTGCCGAGCAGAGGGAATGTGA
- Protein Sequence
- MPTHYKRKCPERGKWTSDQLQRALAAVNEGLMGVNEASRTYGVPSRTLRRRRQQDNAEKVQMGPSSLFGKANETKLVQHIQKLQSRGFSPTRFDVRKIAYKFAEALKIKHNFNKEKEIAGYDWLHSFLRRNPILTVRKAEGMSSCRAEGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00627048; iTF_00627003;
- 90% Identity
- -
- 80% Identity
- -