Basic Information

Gene Symbol
ct
Assembly
GCA_029619255.2
Location
JAROYC020000012.1:849614-862920[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-32 2.5e-28 99.3 0.0 3 77 299 374 297 376 0.96
2 2 1.2e-30 1.5e-26 93.6 0.0 3 75 514 587 512 591 0.95

Sequence Information

Coding Sequence
ATGTATAGAGGCAAAGACACTGGCATACCAACTTTTGGCAGGCCAGAAAACGAATATCCAGACGATAGAATAGCGCACATCCTCAGCGAAGCGTCCCACATGCATATGAAGACGCCGGTGGAAGACACGCATAGCAACGACGATTCGAAATCGCCTCAAGGATGTCCCAGTCCATTTTCGAAAGACTCCTCGCAGAATCGAAAGCTGAAGAAGTACGAAAACGACGATATACCTCAGGAGAAAGTCGTGAGGATATACCAAGaagaatttgcgaaattaatgGGAAGGAGGTTAGAGGATATGAGGAGTTCCAGAGACGTAGTCCATAGTATGTTTCTGCCACAAATATTTAGCGGAGCGCCTATGGATCGGACCCAAGATGATATTCGCGCAGCAATCGACGCTTACCACAGAGAATTGGCTAAAATCAACGTCACCCAAACTCCTGGTCCACTTCCTAATCTCGGTCTTCTCGCGTTACAACAGCAAGCTCTAGCGCATAACCCTACGATGAACGGAGGTGCGCAAGATCTATCTCTACCAAAAGAGAAGACCAAGATGATGAACGGTACTGAGGAGAAGGACAGGGAAGAGGATTGTTCGAAGCATTCTGGTAGCGCTTTCAGTTTGGTAAGACCCAAAATCGAACCGGGAACGACGCCCCAAACAACAAGTTCTACCGCGTCCAGTCCTTTAGGAAACACAATCTTGCCACCCGCGATGACCCCAACCGACGATTTCTCTGGATCAGCGGCCGCTAGTCCTTTACAAAGAATGGCTTCCATTACGAACTCTTTAATTTCCCAACCTCCAACGCAACCCCATCCACCATCCTCGCAGCGGCCCCTTAAAGCCGTGCTCCCGCCGATAACCCAGCAGCAATTCGATCTATACAATAACCTAAACACGGAAGACATAGTTAAGAAAGTTAAAGAACAATTAAGCCAGTATTCCATAAGCCAAAGATTATTCGGAGAATCGGTTCTTGGACTCTCGCAGGGATCAGTTAGCGACCTATTAGCACGGCCTAAACCCTGGCATATGTTAACGCAAAAAGGTAGGGAACCCTTCATCAGAATGAAGATGTTTCTAGAAGACGACAACGCTGTACATAAACTAGTTGCTAGCCAGTATAAAATAGCACCTGAGAAGCTGATGAGAACAGGCGGATACGGAGCTGTCCCTTACTACATTTCAGCCTGTACATCCGTCGCCAAGCCAATGCCGCCTACACCTAAAATGCTGAGCGAGGCCGCTGGTCTCCTCAATAAAATGCAAGAGTCGCAGAGTCTTCTGCCTCCGTCGTTGCAGATGGGGCACCATAATCAAAACAATCCTCAACCTCCGCCGCCACCGATGCTTCTGACACCGCCCGGGGTGCCACCACATCACGCCATAACCTTGCAGAACCAGGAGCATATGAAGAAGAACAATCATAGTCCGCATGGTATCCCGCCATCACCTATCAACCAACAGCCGACGATGAGACCGATGCACCAGCATATTTCGCCTAGTGTATACGAAATGGCGGCGCTGACGCAAGATCTCGACACGCAAGTCATCACAACAAAAATCAAAGAAGCTCTTCTAGCGAATAACATAGGCCAAAAGATCTTCGGCGAAGCAGTTTTAGGCTTGAGTCAAGGTTCAGTCTCGGAACTTCTCTCCAAACCTAAACCATGGCACATGCTCAGCATCAAAGGTCGGGAGCCGTTCATCCGGATGCAGCTCTGGCTGAACGATGCCCACAACGTCGACAGGCTGCAAGCGCTTAAAAACGAAAGAAGAGAAGCCAATAAGCGTAGGAGGTCTTCCGGTCCCGGAGCGCATGACAACAGCTCCGACACCTCATCGAACGATACCTCCGAGTTCTACCATTCGAATTCCCCCGGTCCGGGACCACCGTCCTCGAAAAAACAAAGGGTCCTATTCAGCGAAGAACAGAAAGAAGCGTTACGACTGGCCTTCGCTATGGATCCGTACCCTAATATGTCCATAATGGAATTTTTAGCCGGCGAATTGAACTTATCAAGTCGGACTATAACGAATTGGTTCCATAACCATCGAATGCGGTTAAAACAGCAGGTTCCTCACGGCATAGCGACCGATATTCCGCCGAGAGACCAAACCAGCAATCAAACGCCGTTCGACCCATCACATTTTAAGATATTATTAAACCAAAGATTATTAGAACTTAATAAGGAACGAATAGGACTCAGCAATCTGCCCTTAGGATATCCCTACATCGCGACCAATCCGAATTTGGCAGCCTTGATCGGGCGGGGACTACTTCCGGCCAGCGATATGGATTTATCCGCTTTAAATAACGCTGTTAAAGAGCAAATGAGCGGGTTGGACTTATCGATGACCTCGTTAAAAAGGGAACCTGGGGATTTCGACGATGAAGATGACGTCGATAGTAACGTAGGATCTGAAGACTCCAATATGTCGGGGAGCCTGCATAGAGGCGAGGTAAAAATCGAACGGAAAGAAACGCCGGCTTCATCGCAAGGTAGGTCCTCAAGGAGGAAACCTGCGGCACCCCAGTGGGTAAATCCCGAATGGCAGGATGAGAAGGAGAAACAACAACACCAACCTCAAAGCGGAGACGAAGTAATCATAAACGGAGTTTGCGTGATGCAAACTGAAGATTACGGTAGGAGGAGTTCCGAAGAAACGGTCAGAGTGGAACCAACCCCGGTGATGGATCGTTTCGAAGACGACCAGAGCGACGCCTCATCGGTAAGCCAAGGCGACGATCAACATCAAGAGCAAAGACATCATCACTTGCACCAGCAAGACAAAGACGAACTCGAAGAAAACAACGAAGAACCGGAACCGGACAAACAAGTGAAACAAGAACGGGAAGTGGTGGAAGAAGAACGATGGGATTATTaa
Protein Sequence
MYRGKDTGIPTFGRPENEYPDDRIAHILSEASHMHMKTPVEDTHSNDDSKSPQGCPSPFSKDSSQNRKLKKYENDDIPQEKVVRIYQEEFAKLMGRRLEDMRSSRDVVHSMFLPQIFSGAPMDRTQDDIRAAIDAYHRELAKINVTQTPGPLPNLGLLALQQQALAHNPTMNGGAQDLSLPKEKTKMMNGTEEKDREEDCSKHSGSAFSLVRPKIEPGTTPQTTSSTASSPLGNTILPPAMTPTDDFSGSAAASPLQRMASITNSLISQPPTQPHPPSSQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGAVPYYISACTSVAKPMPPTPKMLSEAAGLLNKMQESQSLLPPSLQMGHHNQNNPQPPPPPMLLTPPGVPPHHAITLQNQEHMKKNNHSPHGIPPSPINQQPTMRPMHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSSKKQRVLFSEEQKEALRLAFAMDPYPNMSIMEFLAGELNLSSRTITNWFHNHRMRLKQQVPHGIATDIPPRDQTSNQTPFDPSHFKILLNQRLLELNKERIGLSNLPLGYPYIATNPNLAALIGRGLLPASDMDLSALNNAVKEQMSGLDLSMTSLKREPGDFDDEDDVDSNVGSEDSNMSGSLHRGEVKIERKETPASSQGRSSRRKPAAPQWVNPEWQDEKEKQQHQPQSGDEVIINGVCVMQTEDYGRRSSEETVRVEPTPVMDRFEDDQSDASSVSQGDDQHQEQRHHHLHQQDKDELEENNEEPEPDKQVKQEREVVEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00987639;
90% Identity
iTF_00307455;
80% Identity
iTF_00626013;