Basic Information

Gene Symbol
Kdm5
Assembly
GCA_029619255.2
Location
JAROYC020000014.1:106516-122784[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-21 5e-17 63.5 0.0 26 89 2 62 1 62 0.95
2 2 1.7 2e+04 -2.6 0.0 38 48 98 108 97 127 0.82

Sequence Information

Coding Sequence
ATGGTGGAAAAACGGGCTCTAGATTTATATACTCTACACCGATTAGTACATGCTGAAGGCGGGTTTAATAACGTAACAAAAGATAGAAAATGGTCTAAAATAGCATCGTCCATGGGTTATCCGCAAGGTAAAAGCATAGGCACAATGTTGAAAACTCACTACGAAAGACTGTTGTATCCCTACGAAGTATTTTCAGAAGgaaaatcgataaaaaatttaAAAAAGGAATTAGCCGATGAGATTAAATCCGAAAATGACGAGGAATACAAACCGCACCGTATCGAAAGTCGAATGATGGTAAATAAGAAAGGAGGCTGCAGACGAAGGAAAATGACTCCAGATCCAGAGACAAAAATCCATAACGAGaaTAAAACGAAAGAGAAAGATGACACGACGGACGGCGAACATAACAAGGAATTGAAACGCTTACAGTTCTATGGAGCTGGACCGAAGATGGCTGGTTACAATTTGGATAAGAAAGATGATAAACCTAGAGGGAAAATTGTGAATTACGATTTAGATTACGACCCTCTTGCCAAATATGTTTGCCACAATTGTAATCGTGGGGATTCAGAGGAATATATGTTGCTGTGTGATGGCTGTGATGATAGTTACCACACATTTTGTCTGATGCCACCTTTAGTCGAGATTCCAAAAGGCGATTGGTGTTGTCCAAAGTGCGTAGCAGAAGAGGTTTCTAAACCCACCGAAGCCTTTGGTTTTGAGCAAGCCCAGCGagaatataatttacaacagTTTGGGGAAATGGCGGACCAATTCAAGTCTGAATATTTTAACATGCCCGTTCATcTTGTACCAACTCAAATTGTTGAGAAGGAGTTTTGGCGAATAGTTTCGTCGATAGATGAAGATGTAACCGTTGAATATGGCGCAGATTTACATACGATGGATCACGGTTCAGGATTTCCAACAAAAAATTCTATCAATCTTTTACCTGGTGATCAAGAATATGCATATTCAGGATGGAATCTGAATAATTTACCAGTTTTAGAAGGATCCGTCTTGGGTTACATTAACGCTGATATCTCCGGGATGAAGGTGCCTTGGATGTATGTCGGCATGTGTTTTGCCTTTTTGGGCCCCGAAAACCACTGGAGTTTTCGTCTTACTTTGGGGGGAACCCAAAAACTTGGAATACAGTTGTCCTATTGTCTACTGCTTCTTTACGTACTTAAGCTTGCAGGTATGGCGTACCTGGATCGAAAGCAGAAATGTTCGAAGAGACCATGA
Protein Sequence
MVEKRALDLYTLHRLVHAEGGFNNVTKDRKWSKIASSMGYPQGKSIGTMLKTHYERLLYPYEVFSEGKSIKNLKKELADEIKSENDEEYKPHRIESRMMVNKKGGCRRRKMTPDPETKIHNENKTKEKDDTTDGEHNKELKRLQFYGAGPKMAGYNLDKKDDKPRGKIVNYDLDYDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLVEIPKGDWCCPKCVAEEVSKPTEAFGFEQAQREYNLQQFGEMADQFKSEYFNMPVHLVPTQIVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSINLLPGDQEYAYSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFAFLGPENHWSFRLTLGGTQKLGIQLSYCLLLLYVLKLAGMAYLDRKQKCSKRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-