Basic Information

Gene Symbol
ARID5B
Assembly
GCA_029619255.2
Location
JAROYC020000008.1:35248632-35272833[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-26 7.5e-22 78.9 0.0 3 89 236 320 234 320 0.94

Sequence Information

Coding Sequence
ATGAAATGCTTAATGTTTTATCATTATCGAACTAAATCAAAGATATTTTTACAGGATGAAGTTTTGGCAATATCAGAGAAGGTAGTTTTGAGAGTAGAAGACTTGATAACGTGGATAACAGTAGATGCCGAATGGACATGGGGTCGATTAGGCAAATGCTGTCCAAGAGATAGCCATGAAGATGACATCCGACATTTCCTATCATTTTCTGAAAGTTCCTTAGACTTTGCAGATGtggaaaaagaaaggaaaacatTAGataCCTGCAACTCGAAAGGACCATCGGTGATCATTCTTAGCTATCCGAGATATTGCCGGTATAGATCAGTAATGAAAAGATTAGAAGGAGTGGAAAATGACTTTTTGAGGCATAAATTGGTGAATGCCCTAGGTGGTTTCAGTGTTCCCACATACAACACGCGAATACTGTTTTGTAGAGATACTTTCGATTACCCAGAGTTAGAAGGGCACGAACTACTATGTAATCATCTCGCACCTAAACTAAAAGGAAGACCTAGAGGGAAGCGGAAAAAACGTAGCTTGTCACCAGGATCAGAAAGTAACGAGTCAGAGTGTTCAATTTCTATTGTAGCTAGTACATCCACGggtaaattatcaaatgaAGATTATACGAATGGACTTAAAAGAGATTGTGGTACGATAGCTACAAGGCGCAGTACACGATCTACAGATAGCAATGACAGCAAGGTATTCCTCAGAAAACTGACATCGTTTATGAAAACGAATCACACGCCAATTGGAAGGATTCCTTCATTAGGTTATAAAGAACTTGATCTACATAGATTCTACACAAAAGTGCAGAAATATGGCGGCTACGATGTAGTTACTGCAAATCGTCTTTGGAAATCAATATTTGATGACTTGGGAGGTAATCATGGTAGTACAAGTGCAGCTACTGTGATAAGACGGCACTACGAAAGATTTTTACTTCCTTATGAGCGCTTCGTTAAGGGTGAAGAATACAAACCACTGCCAGTATCTGAAAGAAGAAGATTAAAAACTAAAGCGAGTAGAAACAGTGTTAGCGACGCTGAAACTAGCGAAGGTACATCCGGTAGTGATAATAGCACGCCAATGCCTCAACCCGTGTTTCCTTCAACTAGTTATGCTGCATTTACAACTGCAAGTGGAACTACGGAATATAAGGATAATCCCGATAAAGTTAAAACATCATCTTTACGTAGTGTAAGAGTGAAACCAGAGAGGTTAAGAGAagcaggaaaattaaaagtggAACCTATACTTAAAGATCCAATTTCGGACAGCAATAATGGACCAATTACAACGGAACCGAAAGAGGAAATTAGTGAAAAACCCAAGCTATTAATTCTTCCCGACAAGAAAGACAATGAACCTACCACAACTGCACTTACGccattacaaaaaataacagCAGAAAAAACGCTTAGTCCAATAGAAAGTAAAGAAATTCCTATTGTAGAAATTAAAGAAGAAGCAGAGAAAATTGTGGAACTTATCGAAATACCTCCTACAGATGACGCAGTACATAAAGACGTTATAGAATTAGATTCAACAGATGTGTATAAAACTATAAATTCGGTTAGTAATAAGAATAGCATTAACGAAACGGTTATAACAGAAGTGAAAAAGCAAAAACTCGATATCTTAAAACAGGGTGGTTTGGAAGTAACACCAGTGCGAAACATAGTAGCCAGTAAAAAAGAATCGCGGCCTTCGGTAATCCACACGGCAATAGCACACCGAGCAGAAATATTTCCCAACGATGTCATCGATGACAAAAAGCAAATGCCACCACCACAGTTAGCAACTTTAACAAGACGCCCCGTACCCCCCATCATACCTACGGTGCCTGTACCGGTACCTTCAAAACCGCCGATTCATACGAATAAAACATTTCCGTATAATAATCCATCTCCGCCCAAGGTTGTACAGTCCAAATCAATTTATTCACCTTCAGGCGAGACCGTATATGGAGATCCAAAAGTCATTTTCCAGCCTTCTATACGAAACATTCAGACACcaaaatttatggaaaattcTCGGCAACAAACTGGTGGGGACATATTGGACTTGACTGTGAAAAGTCCGCAGAAACCAACGATTCAGAATGCCCATATTCCGCCATATCATATTCCAAGTGGGAATCTAATAATACCATCTCCGTTTTCAATGCTGGATAATAGAAAGgtCGGTTCCAATTTGGAAATAACGCTAGTTGGAGCCACCAAAAATCTGAAACATATTAACAGCATTAACAACAACAACCACAGCAAATATACGCCGAAGCAACGGAATATATTTAGCCATCCGCCTTTTAATCAGCAGGAATGTAAAGTTCCACAAAAAAGATCTTACACAGATTATTACGGTAACTGTAAACTGCCTAAAGTAGatgataaaataagaaatacgaCTTATTCCACGCAAATGTATCCCCCGCGTGACATAAAAAAGAGTGACTTTGAATCAACGATAAGCAAACagtacaaaataaacaatacgCCCACCAAAACGCCAATAACGCCCCATTCTGCAGCAAAACAAACGTTTTTACCACCTTCCACGATGTTTAATATGCCAAGTTATTTAAGTTCGGTTGCGAAAGGCGTACCACCATTTTTGCATATGGACCCCTCATTATATTACTTACAAAGTATGTATTCTCCTTTAAGTTTGCCGCCAATGTCGCTAATGCCCAGTCCGGACTCATTGCAGCTGTACACAGAAATTCTATCTCAAAATTCGAGGTCGCGTACCCAGTTTCCTTTTTTACAAGATAATTCACCTATGGCAACTACcaataatagtaaaaaataa
Protein Sequence
MKCLMFYHYRTKSKIFLQDEVLAISEKVVLRVEDLITWITVDAEWTWGRLGKCCPRDSHEDDIRHFLSFSESSLDFADVEKERKTLDTCNSKGPSVIILSYPRYCRYRSVMKRLEGVENDFLRHKLVNALGGFSVPTYNTRILFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSLSPGSESNESECSISIVASTSTGKLSNEDYTNGLKRDCGTIATRRSTRSTDSNDSKVFLRKLTSFMKTNHTPIGRIPSLGYKELDLHRFYTKVQKYGGYDVVTANRLWKSIFDDLGGNHGSTSAATVIRRHYERFLLPYERFVKGEEYKPLPVSERRRLKTKASRNSVSDAETSEGTSGSDNSTPMPQPVFPSTSYAAFTTASGTTEYKDNPDKVKTSSLRSVRVKPERLREAGKLKVEPILKDPISDSNNGPITTEPKEEISEKPKLLILPDKKDNEPTTTALTPLQKITAEKTLSPIESKEIPIVEIKEEAEKIVELIEIPPTDDAVHKDVIELDSTDVYKTINSVSNKNSINETVITEVKKQKLDILKQGGLEVTPVRNIVASKKESRPSVIHTAIAHRAEIFPNDVIDDKKQMPPPQLATLTRRPVPPIIPTVPVPVPSKPPIHTNKTFPYNNPSPPKVVQSKSIYSPSGETVYGDPKVIFQPSIRNIQTPKFMENSRQQTGGDILDLTVKSPQKPTIQNAHIPPYHIPSGNLIIPSPFSMLDNRKVGSNLEITLVGATKNLKHINSINNNNHSKYTPKQRNIFSHPPFNQQECKVPQKRSYTDYYGNCKLPKVDDKIRNTTYSTQMYPPRDIKKSDFESTISKQYKINNTPTKTPITPHSAAKQTFLPPSTMFNMPSYLSSVAKGVPPFLHMDPSLYYLQSMYSPLSLPPMSLMPSPDSLQLYTEILSQNSRSRTQFPFLQDNSPMATTNNSKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00626851;
90% Identity
iTF_00626851;
80% Identity
-