Basic Information

Insect: Dufourea novaeangliae
Gene Symbol: zld
Assembly: GCA_001272555.1
Location: NW:231193-236542[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.002 0.11 12.2 3.3 1 23 25 47 25 47 0.97

2 7 0.00088 0.049 13.3 0.0 2 23 209 231 208 231 0.97

3 7 0.0018 0.099 12.3 2.9 1 23 453 477 453 477 0.92

4 7 0.075 4.2 7.2 5.4 1 23 950 973 950 973 0.93

5 7 0.017 0.94 9.2 1.9 1 23 979 1001 979 1001 0.87

6 7 2.6e-06 0.00014 21.2 5.6 1 23 1007 1029 1007 1029 0.98

7 7 2.1e-06 0.00011 21.5 1.2 1 23 1035 1057 1035 1057 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.002	0.11	12.2	3.3	1	23	25	47	25	47	0.97
2	7	0.00088	0.049	13.3	0.0	2	23	209	231	208	231	0.97
3	7	0.0018	0.099	12.3	2.9	1	23	453	477	453	477	0.92
4	7	0.075	4.2	7.2	5.4	1	23	950	973	950	973	0.93
5	7	0.017	0.94	9.2	1.9	1	23	979	1001	979	1001	0.87
6	7	2.6e-06	0.00014	21.2	5.6	1	23	1007	1029	1007	1029	0.98
7	7	2.1e-06	0.00011	21.5	1.2	1	23	1035	1057	1035	1057	0.98

Sequence Information

Coding Sequence: ATGAGTGAGATGACGAGTGTggaacaacaacagcaacagcaacagtaCGTGGGCGGCAGTTCGAATCCGGAGCATCATTGCAAGGACTGCGGCCTCTACTTCGAAAGCGATAAAAGTCTCGAGGTGCACCTGCGATACCACCAGGAGAACCTGCTAAGCCAGTGGGCGAGTCAAGCACAGCAGGAGGAGagtaacaacaacaacagtaAGGCTGGCAATCACAACAGCCACGTGGGCGTCAAACGCGAGAGCGTGACCGCGCCGGCGGACTCGAGCGAGTCTTCCTCGAGGCCGCCCTCTCAGGATCCTACATCCTcccaacaacagcaacaacaatcgcagcagcaacagcaacaaccaTCGCAGCAACAGTCTGCCGGTCAAGGTTACAATCATTTTCAGACGCCGATGTTCGGCGAGACGaattattttatgcaaaacgAACCGGCCTATATCTTGCCCCATCATTACTCACCGCCGCGAGAAGATACGCAAAACAATGGCGGTGGTAGTGGTGGAGGCGGCGGAGGTTATTCGCGCTACCATCCGTACCAGCATCAGCAACACTTTCCTCCGGAACGCACCAGTTCGGTCAGTTCCACTAGTCCAAGGAGTCCGCCTCTTCAATGTGATAAGTGCGGTGCGGTGTACGAGGACGCGAATCAGCTCGGTGAACACGTGAGGACGAATCATTCGAATTCACCCAGTGGTGGATATCATGGTCAACATCAATATCAACAATTGGGCAGCAGTCCTCAACAACAGAgtcaacaacaacaacagcagcagctGCACACATCGTCGCCGCAATCCGgccagcagcaacaacaacagtcTGGCTACGATTACAATGGTGGACAAGCTGTGAAAACGGAAGTGAAGCAAGAACCGGAGGAACAAGCCGAGATTCTCGACCTGGATTCTCACAAAGTTCAAACTCATAGGTATGAGGAGGAACTGATGAGGCTCCATCAACAGCAACAACAGGAATTGCAAATGCAGATGCATCAGCAGCAGGTGATGCAGCAACAGCATCAGCAACAGCAAAGGGCGGGATCGCATTCGGTGAGTTCTATGTTGGGTTGGCCACCGACTGCCCAGCCTCATGATTATCATCCTGGGTTATCGCCGATGGGCCCTATGGACAGTGTCTCACCGCTCCCAGATCAGGGTCAATTCATGCGCGGGCAACATATGCCCGTTGAACCGCCACGACATCCGGGTTCACCTATCATTACAAGCACGCAACCGATGCCCGGTCATCAGATGCCTGCAGGCCTTCTGCAACAGCCTCCGAAACCGCCGCCCTTGGCCAATCAATCATGGAAAAGTAATGAGGCGCGGAGACCAAAGACCTACAACTGCACCGCGTGCAACAAGTGGTTCACCAGCTCGGGCCATCTGAAAAGGCACTACAATACGACGCTGCACAAGAACGCGGTCAAGCAGAGCAACCAACCGGATCCAGCCAACCTGCCTATCAGTGCTCATCACCATCCTGGTAGAGATAATCATTCAGGTAGTGGAAGGGGCGGCGGGGGACCACCAAGATCACCAGAATTATCTTCTTCCGGGAGTCCCCCAAACTTGATGGCAGGTCCCTCGGGAGAGGCGGCGAGGGGCCTGCTTCACACGCCCACCACCACCAGTCTCTACAGCAACAACAATTccaacaacagcaacagcagcagcagcagcgaaTCTTCGGCGGTGGCGGTCCTAACGCAACAAcaccagcagcagcagcaaccgCCTTCGTCGGTCCACTTGGGCTCCACAATGGTGCCGCCGCTCAATTCCCCAGCACAATCTCCAATGGCGGGCCACCATCAGCAACAAATGGGTTCCCCATCCCCTCAGTTGGGCCACCaccagcaacagcagcagcaactTCATCACCTGCCAATGGGTTCGCCGTCGGGCCAACTTCCGGTCCACCATCCCATGAGTTCGCCCATGTCACCCATGCACCCACCGCCGGCGCCCCACCTGAGTTCGCCTTCGCCAATGGGCTCGTCCCACCCGCACCACATGAGTTCGCCGTCTCCCATAACGCCGGGCTCGGTCCACCCAGTAATGGCTTCGCCCACGGCGATGGGGGGTACTACGATGCCTCATCAGCCGTACCCAAACGCCTTGCCCCCCCACGTTACAACTACTACCAACATCCCGGGCCTGCTGGAGTCTATCACCATCCAGCTAACTACTACTGGTAATGAGATGCCGTTAACACTACCGGTACAATCTCAACACCAGCAAGctcagcagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacgccagcagcagcagcagcagtcTCAGGATGTTTTACCTGGTTTCGGCACCTTCAGTAACCATCAGAGGGCATTGCCGAATTTTACACAGTTCAACGTCACCGGGTTTCTAATTGGCCAAAATCAACCTCAGGCCGTTAACGTGGGGGGGCTAAGTCCGGAGGAGAACACGTCTCCTCAAGATCGATCATTTGACTCGCCTGGATCGAACTACGATCCGTACAGGAGTTCACCGCCTCGGTACGAATCTTTAACGAACATGGACATAGAAATGCCAAATACCGACGGTATGATCATCAAACAGTACGAGATCCAGACGCATCATATGTCGCATCAGCTCCATCATTCTCGAGACAATCTCGAGGCGAACAACAATCTACCGCAGCTCATTCAAGCGAAGGAGGAGCTGAATCCGAATGTCGGTAGACAATTCGAGAAGGATCACAAATCGAAAGGGAACGCCGTGATCACGAAGGAGCATCAGGTGACCAGCACAAACACCGGCTCGCACTATATTTCCCAGGACGGCTTTCACAAGTGCATCGAGTGCGACAAGGTCTTCAACAAGGCCTGCTACCTGACGCAACACAACAAGAGCTTCCACTCCGGGGACAAGCCGTTCAAATGCAATCAGTGCGGCAAGAGGTTCCCCCTCGAGTACCTGCACGCGGAGCACTTGCAGAAGCACGCCGGCGACAAGCCGTACAAGTGCGAGATATGCCCGAAGCAGTTCAACCACAAAACTGACCTCAGGCGGCACATGTGCCTCCACACTGGCGAAAAGCCGTACGCCTGTGATAATTGCGGCAAGGGATTCATCAGGAAGGACCACATGATGAAGCACCTCGAGACGCACAAAAAGAAATCCAACAACCACAACGTCCATCTACGGGCGTGA
Protein Sequence: MSEMTSVEQQQQQQQYVGGSSNPEHHCKDCGLYFESDKSLEVHLRYHQENLLSQWASQAQQEESNNNNSKAGNHNSHVGVKRESVTAPADSSESSSRPPSQDPTSSQQQQQQSQQQQQQPSQQQSAGQGYNHFQTPMFGETNYFMQNEPAYILPHHYSPPREDTQNNGGGSGGGGGGYSRYHPYQHQQHFPPERTSSVSSTSPRSPPLQCDKCGAVYEDANQLGEHVRTNHSNSPSGGYHGQHQYQQLGSSPQQQSQQQQQQQLHTSSPQSGQQQQQQSGYDYNGGQAVKTEVKQEPEEQAEILDLDSHKVQTHRYEEELMRLHQQQQQELQMQMHQQQVMQQQHQQQQRAGSHSVSSMLGWPPTAQPHDYHPGLSPMGPMDSVSPLPDQGQFMRGQHMPVEPPRHPGSPIITSTQPMPGHQMPAGLLQQPPKPPPLANQSWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVKQSNQPDPANLPISAHHHPGRDNHSGSGRGGGGPPRSPELSSSGSPPNLMAGPSGEAARGLLHTPTTTSLYSNNNSNNSNSSSSSESSAVAVLTQQHQQQQQPPSSVHLGSTMVPPLNSPAQSPMAGHHQQQMGSPSPQLGHHQQQQQQLHHLPMGSPSGQLPVHHPMSSPMSPMHPPPAPHLSSPSPMGSSHPHHMSSPSPITPGSVHPVMASPTAMGGTTMPHQPYPNALPPHVTTTTNIPGLLESITIQLTTTGNEMPLTLPVQSQHQQAQQQQQQQQQQQQQQQQQQRQQQQQQSQDVLPGFGTFSNHQRALPNFTQFNVTGFLIGQNQPQAVNVGGLSPEENTSPQDRSFDSPGSNYDPYRSSPPRYESLTNMDIEMPNTDGMIIKQYEIQTHHMSHQLHHSRDNLEANNNLPQLIQAKEELNPNVGRQFEKDHKSKGNAVITKEHQVTSTNTGSHYISQDGFHKCIECDKVFNKACYLTQHNKSFHSGDKPFKCNQCGKRFPLEYLHAEHLQKHAGDKPYKCEICPKQFNHKTDLRRHMCLHTGEKPYACDNCGKGFIRKDHMMKHLETHKKKSNNHNVHLRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00963437;
90% Identity: iTF_00361174;
80% Identity: -