Dnoa009590.1
Basic Information
- Insect
- Dufourea novaeangliae
- Gene Symbol
- SOX2
- Assembly
- GCA_001272555.1
- Location
- NW:196410-302107[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-08 0.00012 21.2 14.2 25 109 53 138 50 195 0.70
Sequence Information
- Coding Sequence
- ATGCTCACGATGGAGACGGACCTGAAGGGCGGCAGCCTGCACGGTCAGATGCCACCGCACCCACATCAGGGTGTCTCTCCTATGGGTCACCATACGGGAGTCTCACCCTATGGTAGCCTCGGCTCGATAGTGCACAGTCCAGCTCTATCTGGAAGTCCACCGAGCACAGGTGGCCTGGGTCTCGGTCTCCAGCATCATCATCAAACGTCCCAGCATCACTACGCGTCGATGCAGGCCGCccaacaacagcagcagcagcaacagcaacaacaacaacaacagcaacaacagcaaaGTATGCACTCGTTGGCGCAACAAGCTGCCAGCCAACAGCAACAGCATCATTCCCatcagcagcaacagcaacaacaacaggcCCAGCAGCAGCATCATCAACCGCcgaacaacaacaacaacaccaGCAAGAACAACAACATCGACCGTGTGAAAAGGCCGATGAACGCGTTCATGGTTTGGTCGCGTGGTCAACGTCGCAAGATGGCGCAGGAGAACCCGAAGATGCACAATTCCGAGATCTCGAAACGTTTGGGCGCCGAATGGAAGTTGCTAAGCGAGACGGAGAAACGGCCGTTCATCGACGAGGCGAAACGATTACGTGCGGTACATATGAAGGAACATCCGGATTACAAGTACAGGCCGCGACGCAAGACAAAAACCTTGTTGAAGAAGGACAAGTTCCCGTTGGGTGGTGGTGTAGCGGGCGTTGGTAGTATGTTGGGCGTTGATCAGAGACAAGTCGGGGCTACTGGGGGACCGCAACAGGCGCAATTGTCGCGGGACGTTTACCAGATGCCGAACGGTTACATGCCGAATGGTTACATGATGCACGACCCGACGGCCGCGTATCAGCAACACGTCGCTTACGGTGGTCACATGGGTGGCGCGGCTGCGGCTGCCGCTGCCTCAGCCGCTGGTTATCCAAGGTACGACATGGGACACCACATGGGAGGCGGCAGTCCGAGCCCCATAAACAGCTACATGAACGGTTACGGTGGTTACGGTAGCACAACCGTTCCTGGTGGATCACCGTCTCCCTATCACCAAGCTCAACCAGGCTCTCAGATGTCCAGTCACAGTCCCAGCGGTAGCAGCATAAAATCGGAGCCGACGAGTCCAGCGAGCGGCGGTATTCACACGCCGACGCCGACCGGTGCATCGTCGACGGCCACCGCCGGTGGACAGGTCGTGAAACGGGAATACATGGGCCAGCAACAGACGCAGCAGTCCCAGGGTGATCTGAGACAGATGATATCGATGTATCTACCGCAGGGTGTCGATCAGGGGGTCGTGCAACACGGTGCCGGTGTCTACTCGCCTGGACCATCGCCCGATCCGCTCGCGCAGCATCACTCCGCCATTCCGCCTCTAACTCATATgtcGGAGAGTGACCGTAAAATGTTGAATCCAGAAACCGGCTGCTACTCGGAATCCGTACGGGCATGGTATCGGTACCCGGAAGAGGTGCGCAGACTAGCGTCCAGCCAATATTGCCTAGGGTCCTCGTTGTCTTGA
- Protein Sequence
- MLTMETDLKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGSLGSIVHSPALSGSPPSTGGLGLGLQHHHQTSQHHYASMQAAQQQQQQQQQQQQQQQQQQSMHSLAQQAASQQQQHHSHQQQQQQQQAQQQHHQPPNNNNNTSKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPLGGGVAGVGSMLGVDQRQVGATGGPQQAQLSRDVYQMPNGYMPNGYMMHDPTAAYQQHVAYGGHMGGAAAAAAASAAGYPRYDMGHHMGGGSPSPINSYMNGYGGYGSTTVPGGSPSPYHQAQPGSQMSSHSPSGSSIKSEPTSPASGGIHTPTPTGASSTATAGGQVVKREYMGQQQTQQSQGDLRQMISMYLPQGVDQGVVQHGAGVYSPGPSPDPLAQHHSAIPPLTHMSESDRKMLNPETGCYSESVRAWYRYPEEVRRLASSQYCLGSSLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00738309;
- 90% Identity
- iTF_00084514;
- 80% Identity
- iTF_00625459;