Dnoa008277.1
Basic Information
- Insect
- Dufourea novaeangliae
- Gene Symbol
- bab2_2
- Assembly
- GCA_001272555.1
- Location
- NW:1752929-1920450[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-11 1.6e-08 33.3 0.0 2 35 396 430 395 438 0.89
Sequence Information
- Coding Sequence
- ATGACGCAACAAAGCGGAGCTGGGTCACCGCCCCAGCAATTTTGCCTGAGGTGGAACAACTATCAGACGAACCTGACGAACGTGTTCGATCAACTGCTTCAGAGCGAAAGCTTCGTGGACGTGACACTGGCCTGCGACGGGCACAGCGTGAAGGCGCACAAAATGGTGCTGTCCGCCTGTAGCCCGTACTTCCAAGCTCTGTTCTTCGACAATCCCTGCCAGCATCCGATCGTCATTATGAAGGACATCAAATGGCCGGAACTGAAGGCCGCCGTCGAGTTTATGTACAAGGGCGAGATCAACGTGTCCCAGGAACAGATCGGTCCGCTGCTGAAGGTCGCGGAAAGTTTGAAGATCCGTGGCTTGGCGGACGTAAACAGCGAACAGGAACTGACCTCTAGGCCTAGCCTGGAAGAGGTAGCGAACGCGGCAGCGATGCACAGAAAGAAAAGACGTCGAATATCGGGCGAGAGATCGCCACCGGGCAGCAGCCCCGATCGAGTCGCGCCCGGTAGCCTGCCCGACGATCACGACCCGAACTCCGGCGGAGTGGGCGTGATCGTGCCCGACATTCACGGCATGCTGACCAGCAGCTCGACACCGAGATCCCTCGGATCTCCCGGCACCCCGAGCGTCTCCGTTACGCCGCAGATCAACCTTCAGGAACTTCCGGTATCGCTGCCCCTGCCACCGCCCCCGCTGCCGCCCCCGCAGGGACAGCAAAGCTCGCACTCCGTGTCCGCTCACCATGTGCCCGGCCACGTGACTTCCGGTACCCACGCCTCCGTCAACCACCTGACCAGTCACGGCCAACAGCTCACCgtgcagcaacagcaacaacaacagcagcaacaacagcagcaacaacaacagcagcaacacCATCAACAAGGTGCTGCCGGACAACCGAATCCCGGAGACGATCTGGAGATCAAGCCCGGCATCGCCGAGATGATTCGCGAGGAGGAAAGGTTGGTTCGTCGTTGCGAACGTTTCGTCGCGGGTTCCGAACGTGCAAAGACGCGGGAAAAAGGACTCGGTGACGGTGTGCGTCTCGGTGGTTTCGCGCTCGATATCTGCGAGGCCAAGTTGTTGGAGTCATCCCACGCTTGGCTCGGAGCCTCCACGTCGAGTATAGCAGCTGACTATACGACCCTGCTGAAGCTGAAGGCGCCCACGTGGACGCGACACGATCTCCAGGAAGCGATCGAGGCGGTGGTCACGCAGAAGATGCGATTCACCCAGGCGTCCACCAAATATGGGATACCGAAAGGCACGCTGTACGACAACATCCTGGGAAAGACGAAGCGTATGATGGTACTCGAAGAGGCGGGCCTGAACTCGAACGAGGAGACCGCGGTCCTCGAGTTCTGTTGCGACATCAGCGTCAGCCCGTACAATCGGCGAACGAAAAAATCGTTGAACGCGATTCTGAACTTCGTCGAGAAGCTCAGACGTAAACGCGATCCCGGATTCCTGTTCAGCGGTCTCTCCGGTTTCCGTTGGTGGTGGGCTTTTTGTAAGAAACACTCGATAGTCTCGCTGTACTTCAACGACGAGAACGAGAACGATCAGTGA
- Protein Sequence
- MTQQSGAGSPPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQALFFDNPCQHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAESLKIRGLADVNSEQELTSRPSLEEVANAAAMHRKKRRRISGERSPPGSSPDRVAPGSLPDDHDPNSGGVGVIVPDIHGMLTSSSTPRSLGSPGTPSVSVTPQINLQELPVSLPLPPPPLPPPQGQQSSHSVSAHHVPGHVTSGTHASVNHLTSHGQQLTVQQQQQQQQQQQQQQQQQQHHQQGAAGQPNPGDDLEIKPGIAEMIREEERLVRRCERFVAGSERAKTREKGLGDGVRLGGFALDICEAKLLESSHAWLGASTSSIAADYTTLLKLKAPTWTRHDLQEAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKTKRMMVLEEAGLNSNEETAVLEFCCDISVSPYNRRTKKSLNAILNFVEKLRRKRDPGFLFSGLSGFRWWWAFCKKHSIVSLYFNDENENDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00625583;
- 90% Identity
- iTF_00625583;
- 80% Identity
- iTF_00625583;