Dnoa006691.1
Basic Information
- Insect
- Dufourea novaeangliae
- Gene Symbol
- JARID2
- Assembly
- GCA_001272555.1
- Location
- NW:4857883-4865259[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5 8.9e+03 -3.7 0.1 61 82 154 176 145 177 0.57 2 2 1.3e-22 2.1e-19 68.8 0.0 6 89 1352 1433 1348 1433 0.93
Sequence Information
- Coding Sequence
- ATGGTGCTAAGTCGAAATGataagagaaaaagaaaagaaggggATCTGGTGGATCTGATGGAGCCACTCTCAGAGTCTCCAAAGAGGACCAAAGTACATGCACAAAGAAAATTTGCACAAGGTGCAACAACAGTTTTTAATCCTTCACATACTCCAATTAAGGACAAAGAAAAAGCTAAACCAGCAGTTATAACAGAATTAATTACGCATAAGCGACCAAATACGGAggattttttaacatttttatgctTTAGAGGAACATCAATTTTACCTCCAAgtttaaatttcttcaatgttGGAAACAAGAAAGAGAAGCCACATGTTAAGACAACACGTACACCATCAAATAAAGTCACATCTTCAACTAGTACATCTACTGACAATCAAAAGTCAGATTCAAATCAGAAACCTATTACTAAAATCAAATCTATGATTACAGACAAAAAGAAAGTTACAAACACAATACAAAAGAATATCAGTAAGTTTAAAACTACATCTACTGTACAAGCacttaagaaaaaatatcaagaACAGCGTCTAgcgaaacaaagaataaagaataagTTTAAAACATCGTGCGTTATGAGGACAAGATCTTGTACAGAAAGAACACTTTTAAAATCTGCAAATAAATTAGCACCTAGGAAGTTTCTGCCAAGGATTGAAACCAAGCGACTAGGTTTACGGAGCAGTGTTCTCTcagataaaacgaaaaaagctTCTCCAAAAGTAAAGCCCATGCCACCAAAACCAAAGAAAAAAGTTCTTGTAAAACAGAAAAGTAGTAATACATCTAATTCAGAATGTACATccgaagaggaagaagaggaggaacCTTCAgaaaaaactgtacaacaagTAAAGCGTACAACACAAAAAGCTGTTCAGAAAAAGATATGCACTAGAAGCAAGTCTGAAATGAGAAGAATAACCCGATCCCATAGCGGAACAGTATCTCCAAAAAATCTTTGTAGAAGACCATCTAGAAAAACTAAAGAAGCAGCTGCAGTGTACATGGAGATCCTTGGAAGAAAGCTTGTTAGTCCTGACTTAGAAAATGACGATAATATTTCCATGGACAGCTTTCCAGAATTGCCAAATGCACGCAAAATTGCTCAAACAGAAAGTGAAATCAAAGCCAAAGTGAAACAGCCAGTTATAAAATCAGTTGGTAAAACTAAAGATAGCAAGATTAGTTCCAGCCAAGGTACATCCAATAAACGAtcggagaaaaataaaactagtAAAGTTCCCTTCAAAAGTAAAAGGCTAATACGAGTTCAGAAATACTGTGAAATAGATACCGACGAGGAGTCTGTAAGTTCTAATGGAACTAACAACACAAGACCTGTTACAAGACGAAGTTTAGGAAAAGTAAATAAACCTGCAAGTAGATTCCTTAGATCTTCTTCTAAGACTACAACCACACGAATGGACATTCAGAATAATGTAAATAGCAAATCAAAATCCCAGGTTCAAAATAATCTAAggtttaataaagaaaaattcgtaCTGAAACGTAAACGAGAACAAAGTTTGAACAAGCATCCACCTGAAAAAAGTATTGGAtcaaaacgaaaagaaacaaaaaccgTTGTCGAGGAAAATACAGATTCTGATGAGGAAACTTTAGGTATGTTACTTagcaaattaaaaagaaagaaagaaAATGACCATGATCATGACAATGTCAATGTCAAAGTCAGTATTAATATAAACGACAATGCCAATGAAAATGGCAATGACGATACTTTAGGTAAAGTTGAGGAGCCTTTGGACGAACGTTCTGCAAAGATGgatctttcaaaaatttcagaCGATGAGGAATCTTTTCGGGGGTTTACAAAGAAAGCAATATCCAAAGTATTAAATTCTTGTCAAACACATGCTAATGCTAATCTTCTTATCACAGAAAAGACCACAGAGAAATTGGAGATAACTGaaacagagaaaataaaaagtgtagATACGTGTAAGGAACCAGAAAATAAGGATAAAACTTTCTTAGATAAAAGTTCTCTGTCTGCCCTCTGTATGCCGAATATTGAATATGTCAAGTCCGAAGAAGTTCAGAAAACAAAATCGGAACTGCtgaatgaaatagaattaCAAACAGTGTTGGTAACGAATACCGATAAAGAATGTCTTCACAAATCCGAAATTTCTTCTACAAATGTTATTGATATGTCATTATCAACATTACatgtaagaaaagaaaaagtaaacatGTCGACtgaacaaattgaaaaatggttGAATGAAAGTTCCCTTGCCAAAGAGGAGAGCAAGTTAGAAATGGAGAATGTATCtatgtttaaatatgaaatgtgTGAGAAAAAGACAGATGTTTCGCATTTAtctatttcaacaaaaattcaacACCTGGTCAGACCAGTTAATGTCacactttcaaaattaacagaaaaagCAAGCATGAAAGATCGTTTAAGTATGCAGAATAAATATGTACCCATCACAGCAATAGATTCCCAATCCGTTGATGTAAAACAACAAAATGAGTCGACAAACGTAAAAAAACACAATGTggatttgaaagaaattactaAAGGACGAAATATAAAACCAAATAAAGACTCCTCTCCTGGAGAAGATAATGATACAACTTTAAAATCCGATCATAGTTCAGGAGATGGATCTGCTGAAAAGAAATTGTCATTGGAGAAGAAGTCCATATTTCAACCACGAAAACCGTTTTTACCGAAAGTTAAAGAGCGTAAAACGGTAACGCCGAATGCAAATGCATTTTCTCCGGAAAACGAGAGTAGTGTTTACGCGTTTGAAAGTGACACCGAAGTTCCTGTTAGTACTCCCTTTAGACGTAAAATTCGTGAACCTAATAAATCATCAAAGGCGACTATCATTTCATCTGAGAATGATACGAACAAAAGCatggaaaaaattaacaacGATAATTGTGAAGTATCTGAACCTAAAGAAAACCTTAGTGCTAGCAATGCActtcaaaaaaatgaaaataaagtagTAGAGTCaaaaaatacatcaaattcattattaaatgtaaacagGTTCGACTTACCGAAAAATTTTGCAACTTTAGCCAATATACAAGTCCTACCATTAGATAAGCTAACAACTTGGAGCAATGTAAACTGCAGTGCTTCAATAGCTGTTCAAGTAAATCTTGATGATAGTGCGCAAGGACAAGAACATACAGTGGAAAATGATACAAATCAACAGAAAAGCACAGAAATATCTACTCAAACagaaaacaataatgaaaatgatGATGAGAATGATGGTCAACTGTTTTACATACCTTTGCAAGCTGTTACGAGAAATGGTCCAAATTTAGTTCAAGGACAACAGTTAATTCAAGGTGTAGCTGTTAAACTTGGCACTGAAGGACCGAATGGACCTAATCAGAAAGTACTATTAAGAGCAAAGCTAGTTACCAAACCACCATCATCAGTTGCTCGTTGCCCTCCTATAGGTACAGTGCAACCTACAACTCGTACACCACCAAATTCTGCTCTGTTAGGAGCAGACAATCCACTGCCATCTACTTCATCCAGCACACCTTCTATTATGACTGTACATACTTCTGAAATTCAACCGTCTTCCCCCTGTAAAAGTGAAAATACGACAACGAATAGACAAAGCATTGGAACTGCAGGAACGGAAAAATTAACAAAGTCCCCAAAAACTGCCAGGGAAAGAAAAACCTCTAttgattcaaataaaaacgggAAAAGATGTCAAATTAAATCTAAACAGAAAAGTACTGAAATGTGTTCTCCTTCGAATAATGTAACATTTCCAAGtgcaaaaaatgaaaacaatgatGCGCGTTTAGTTGAAGCTCCGACGTTTCACCCTAGTGAGAAAGATTTTCAAGATCCTTTGGAGTATATAGATAAAATCAGACCCATTGCAGAGAAATTTGGAATATGCAGAGTTGTACCACCACCTAACTTTAAGcCGGAATGTAAAGTATCAGACGATATGCGGTTTACTGCATACAATCAATATGTACATCGTATGCTTCATCGATGGGGTCCTAATGTAAAGGAAATGATGgctataaaaacatatttggCCACACAAAGCATTACACTAACTCATCCTCCTtggATCGGTGGAATGGAAGTTGATTTGCCTCACTTGTATCAAACAGTTCAAAgcttaggtgggttaaaagaagttattgaaaagaaaaagtggcAAAAAGTAGCTGATGGTATGAAAATACCAAAGTCTGCTCAAGATCGTGTAACTAAATTGGATGACAtctactgtaaatatttattaccataCGATACACTATCTCCAGAGGAACGAGGTAAATTGTTCGATGAAGTTGAAGCAGAATGGGTAAGAAGAGAAAGCAGAGCTCTGCAACGACAAAATGCGCCTACAAATGATAATGAGGAAGATGAAGAAGATGATAGTTCAGATGAAATTGAAGAATGCATTGTGAAAGGTAGAAATATGCCATTAAATGCTTTTTACCGCATCGCGCGCAATACACAGCGTATGTGGTTTGGTGAAAATCAGCGATCTGGAAATGAAACAGAAGGTGCTTCTGCGGATGAGGTTGAAAATGCATTCTGGAAGCATGTCGCAGAAAGAAAACGACATGTCTGTGTACACGCTGCAAGTATCGACTCAAGTGGTCGTGGATTTGGATTCTCTGTTGCCAAGAATAGTCCATTCGCCAGACATCCGTGGAATCTTAAAGTACTTACCAATAATGCTGGATCAGTGCTAAGAGCTTTAGGTCCAATAATGGGAGTGACAGTACCAACACTACATGTTGGCATGTTATTTAGTGCATGCTGTTGGTACCGTGATCCACATGGTCTTCCATGGATAGAATATTTACATACAGGTGCTAAAAAGATCTGGTATGGTATACCAGACGAGCACAACAATAACTTTAGAGAAGCTCTGTCGAAAATGGTGCCAcgatattgtaaaaataaaactatatgGTTACCTTCAGATACAGCTATGGTTCCCCCAGAACTATTAGTTAGTAATGGAGTATCGTTATGCCAAACTGTACAAGAACCAGGCCAATTTATAATTGTGTTCCCTAAAGCATTTACGTCAAGTATATGTACTGGTTATGTAGTATCTGAAAGCGTTTACTTTGCACAACTGTCTTGGTTAGAAACTGCTGAACAAGTATTTAAAgaTATACAAGATAGCTGTGAACCATCAATCTTTTCGTTTGAAaggttattaataaatattattaatgattcTAGATCCCATATAGATGTAATGAAACAGaTCCTACCAAGTGTGATTAAAATTCGTGAGAAAGAAATAACTTACCGAAAACAATTAGATGCAGTGGGTCTCACAAATACAGAAAGGTTACCTTTACCAGATAGtggaaaacgaaagaaaggcaaaaaagtaaaagaagaTGATGGTGATTTTGAATGTGAAACTTGTAGAGCTAATCTATTTGTTTCGTTAGTTAGTAATTCGCATGATGACAGTGTTTACTGCTTAACACATGCATTGCAATTACTTAGTAGAAAGAAACAAgctttaaaatattgtactcTCATGTATACATACGACGAGGATGAATTGGATGACTTAATTCACAAACTAGAAGACAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATGAAACAAGCTAAGTAA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNPSHTPIKDKEKAKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGNKKEKPHVKTTRTPSNKVTSSTSTSTDNQKSDSNQKPITKIKSMITDKKKVTNTIQKNISKFKTTSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTERTLLKSANKLAPRKFLPRIETKRLGLRSSVLSDKTKKASPKVKPMPPKPKKKVLVKQKSSNTSNSECTSEEEEEEEPSEKTVQQVKRTTQKAVQKKICTRSKSEMRRITRSHSGTVSPKNLCRRPSRKTKEAAAVYMEILGRKLVSPDLENDDNISMDSFPELPNARKIAQTESEIKAKVKQPVIKSVGKTKDSKISSSQGTSNKRSEKNKTSKVPFKSKRLIRVQKYCEIDTDEESVSSNGTNNTRPVTRRSLGKVNKPASRFLRSSSKTTTTRMDIQNNVNSKSKSQVQNNLRFNKEKFVLKRKREQSLNKHPPEKSIGSKRKETKTVVEENTDSDEETLGMLLSKLKRKKENDHDHDNVNVKVSININDNANENGNDDTLGKVEEPLDERSAKMDLSKISDDEESFRGFTKKAISKVLNSCQTHANANLLITEKTTEKLEITETEKIKSVDTCKEPENKDKTFLDKSSLSALCMPNIEYVKSEEVQKTKSELLNEIELQTVLVTNTDKECLHKSEISSTNVIDMSLSTLHVRKEKVNMSTEQIEKWLNESSLAKEESKLEMENVSMFKYEMCEKKTDVSHLSISTKIQHLVRPVNVTLSKLTEKASMKDRLSMQNKYVPITAIDSQSVDVKQQNESTNVKKHNVDLKEITKGRNIKPNKDSSPGEDNDTTLKSDHSSGDGSAEKKLSLEKKSIFQPRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEVPVSTPFRRKIREPNKSSKATIISSENDTNKSMEKINNDNCEVSEPKENLSASNALQKNENKVVESKNTSNSLLNVNRFDLPKNFATLANIQVLPLDKLTTWSNVNCSASIAVQVNLDDSAQGQEHTVENDTNQQKSTEISTQTENNNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSVARCPPIGTVQPTTRTPPNSALLGADNPLPSTSSSTPSIMTVHTSEIQPSSPCKSENTTTNRQSIGTAGTEKLTKSPKTARERKTSIDSNKNGKRCQIKSKQKSTEMCSPSNNVTFPSAKNENNDARLVEAPTFHPSEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKTYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVEAEWVRRESRALQRQNAPTNDNEEDEEDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNETEGASADEVENAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQLSWLETAEQVFKDIQDSCEPSIFSFERLLINIINDSRSHIDVMKQILPSVIKIREKEITYRKQLDAVGLTNTERLPLPDSGKRKKGKKVKEDDGDFECETCRANLFVSLVSNSHDDSVYCLTHALQLLSRKKQALKYCTLMYTYDEDELDDLIHKLEDRIEAKSKKTNQMKQAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070844;
- 90% Identity
- -
- 80% Identity
- -