Basic Information

Gene Symbol
Mtf1
Assembly
GCA_951804985.1
Location
OX638134.1:85138879-85154527[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.6e-05 0.0034 18.7 1.7 1 23 387 411 387 411 0.99
2 6 3.7e-05 0.0048 18.3 0.2 1 23 417 441 417 441 0.98
3 6 0.00031 0.04 15.4 0.9 1 23 447 471 447 471 0.97
4 6 2.7e-07 3.6e-05 25.0 5.4 1 23 476 498 476 498 0.98
5 6 5.2e-07 6.8e-05 24.1 2.3 1 23 504 528 504 528 0.99
6 6 0.00025 0.033 15.6 3.2 1 23 534 558 534 558 0.97

Sequence Information

Coding Sequence
atggaAAATTCTGTGCAACATCATGCGGCAGTGCAATCTACTGATACTGATAGTAGGGATTACGAGGGTGATGAACACAGCTGCGACACAATCACAGCAACAACACTTCTGCCACAAAATGATATCAGCAAAAATTACGTATCCGTGGTGACCAAACAGGAGTTAGACGACGACGATgaagaagatgatgatgatATCAACCAAGTCGCCAGTCTCAATGGCATTGATTTTGGTCTGGACAATGTTGCGCTCAACTTTAATCATTTGGAGGAGGAGCAGCAGCACTTTAAACAGGAGCAGTTGCAACAACAGCAGGTGCTGCAACAATTTGGTTTAGATTTAGCGCTAGACGACAATCTCGACTTGCATTATCCCTTTCTGAGCGACAATCTAATGCAAGAAGAAACAGAGGCGTCTGTAAAGGCCTTAATCACTAGCGAATTTTTCAAGTACATCGATAACAATTCATTATCTACACCGCCCACATCGCCCTCCACCCCTGCACTATCATTACATTCACAATTAGCATTAACATCATCCTCATGCTCACCGCACACCTCCATATCGCCACCCTCACCACTGACGCTGGCGCCACCCTCACCCGCGACAGCATCCAACGCATATTCACCCACATTTACGACTATGACTGCGTGTCCGTACATCAATGACGTCGACTTGGACGGCGACGACAATAATAGCAATAACCTAATACAACTTAATGACAACAACGTCAGCAGTAGCAGCATAAACAGCACATCGTCGCCACTCAACACACACGACAGCGACAGCGGCATTTGCTTCACCTTCGAGTATGAATTCCAAGACCAGCAGCTGGTGCAAATACAGCCTGTGGTGGCGTTGACGCTGCCCTCAGCATTTGCGCCCATAACAGTGCCGCTACCTTTGCCCGCTGCAGCAAACGATGTCGCGTCAACAGACGCTGCCGCAGTGCGCATCAGTTGGATGGATTCTAGTGATGCACAAGAGTACGAAGTCCCTCATTCTTGGCCAGTTTCGCCGCACGACAGTTACATCGAACAAAATGTTCAACCAGATGATATTTCATTATGTATACGTCCCGGTGCCTTACACAAACCTACAGGAGAGCCAACTCATGCAACAGTTATGTTCGAGAATTCAGATGATTCGCTTAGTCGTTACAAGTGCAACTATGAAAACTGCAATCGTAGCTACAGCACAATTGGCAATTTGCGTACGCATTTAAAAACTCACAAAGGCGAATATCGTTTCAAGTGCGATGAGGAGGGCTGCGGCAAGGCGTTTCTAACATCGTATAGCCTTAAGATACACATACGCGTCCATACCAAGGTCAAGCCATACGAATGCGAGGTGAACGGGTGCGAGAAGGCGTTCAATACGCGATACAGATTACATGCCCACTTGCGTTTGCACAACGGCGAGACCTTCAACTGCGAGCAGTGCCAGAAATGCTTCACCACGCTGAGCGACCTCAAGAAGCACATGCGCACCCACACACAAGAGCGTCCCTACAAATGTCCCGAGGACGAGTGTGGCAAAGCGTTCACCGCGTCGCATCACCTCAAGACGCACATACGCACGCACACTGGCGAGCGTCCGTATCCGTGCAAGGAGTCCAGCTGTGAGAAGGCATTCAGCACCTCGCACAGTCTCAAGTCGCACAAGAAGACGCATCAGCGTCCACCCAGCGCCAAGGCCAAGGAGCGCAAGCTCAAGAAATCCAAATTTGCCAAAGCGATGCAACAGCAACAGGATGATGTGGCCGACTGCAAGCAGTCTTTCAAGGTGGACAGCGACAGCAGCGGCTACATTGAGGAACTGCAGCCGCCCTCCACCTCTTCGACTGCATCATCAGTTTGTCAAGCGCTCGATGACGAGGCCATTTTATTGACAGACACAAAGCCGTTGCAGTCGGAGTTTTTTAAATCGACAGACTTTAATATTATGCAATTGCGCTATACGCATGCGCCTGCGCAACTGCCCGAAATCAAGCAGCTACACAACATGGTTGCGTTGGCGCCCAAACTGGAGGCCTTTCCGTTGCCGGAGACTTCGCAAGCGTTGCAGCTGGCATATGCCGCAGAGGAGGAGCTGCCGGCACCTTGGCTTGATGCAGCGGTGCTTGTCTCCAAACCGCTGCTGCCCATGGCGCGCGTTACACCTGCCTGCGTTGCGCTACCGACAGAGGTACCCAGTTTTGTTGATCTGCAGACGAGCAGCTACAGCAGCCTGCGCAACAATGTGAGTGATAACGCTGATCCGTGTGACTTTCTGGACGATGCCGAGCATAAGTTGTGCGGCACGGAGTTAGCTTTAACTAACAatatgcagcagcagcaacatgtaATGCATATGGAAATCGATCAAAATCAAGAGTCGCATAGTCTAAATAATGTGGTCAACAACAACGCTTCGCTACCACCGCTGCAAGAAAACATCGAACAACTACTGCAAGAGGCCGCCTTCAGCAGTGACGAGGACATGGAAACCGACTCTTTGCTCAACGACATACTCATGACCATCGACAAGAACGAGGGACTGTTGCAGCAGACTCTGCAGCAGGCTGAACAGGTGCCCGACAATGCGCTCGGACTCTTCGAGGTTGATTTGCGCAACGAGGACCGACCGACACTGAAGCAGATCACAGCAGATGCGGGCATCTGCAGCTGCACCAATTGCAAGTGTGACCAGACGCAGGACTGTCAGGGCGGTTGCTCCACGGAGAAGCCCTGCACCAAAAAGTCGGCGACAGCGAAAACTAACAAAAAAGCTATAAAAACAACGTCGGGATGTTGCAGCCATAAGACGGTGAACAAAACTGCGGCATCGCCCAGCAAACGCGAGGCAGAAATGAATCAAAATATAGAAGATGTTGCAGTATTACTACAGAATTTGGCTTCGATGGGCGGTTCGGGTGGTACTGCTGGCGGTGGTTGCTGTGGAGGCGCTGCAGCTAAACCTATAGCACAGCCGACAGCGCCACCTATTGGAGGCTGCTGTGGTGGTGGCGGGGCAACTGCCATAGAGGAGACACCAACCGCTATAGGTTGCTGCGTAGGTAAAACATCAAATACAATACCAACAGCAACTGGTGGTTGTTGTGGCGGCGGTCCAGGCGTTGTTGACACTGGCTGCAAAATACCAGAAAAACCAGCAGTGAGTGGCGGCGGCTGCTGTGCTACTGGTGCCGCCAGCAAAGCAGTTGTACGTTCGAACAATACCTCGAGTTGTTGCAAACCGCCAGCGCAACAAAGTAATCGAGGTGCAGCCGCCGCTGCTGCACCTAAACAGGCAATAAAAAGTGCCTCCTGCACCTGTAAGAGTCCCGCAGAGGGTGTGGCCAACGGCTGTTGTGTCGTCATCTGCATTAAGACGTTGCAGGCATTGCGCAAAGTGTTGACGCGCAAAAATATGAACCTGATGTTGTgtccacaaaatcaaaattag
Protein Sequence
MENSVQHHAAVQSTDTDSRDYEGDEHSCDTITATTLLPQNDISKNYVSVVTKQELDDDDEEDDDDINQVASLNGIDFGLDNVALNFNHLEEEQQHFKQEQLQQQQVLQQFGLDLALDDNLDLHYPFLSDNLMQEETEASVKALITSEFFKYIDNNSLSTPPTSPSTPALSLHSQLALTSSSCSPHTSISPPSPLTLAPPSPATASNAYSPTFTTMTACPYINDVDLDGDDNNSNNLIQLNDNNVSSSSINSTSSPLNTHDSDSGICFTFEYEFQDQQLVQIQPVVALTLPSAFAPITVPLPLPAAANDVASTDAAAVRISWMDSSDAQEYEVPHSWPVSPHDSYIEQNVQPDDISLCIRPGALHKPTGEPTHATVMFENSDDSLSRYKCNYENCNRSYSTIGNLRTHLKTHKGEYRFKCDEEGCGKAFLTSYSLKIHIRVHTKVKPYECEVNGCEKAFNTRYRLHAHLRLHNGETFNCEQCQKCFTTLSDLKKHMRTHTQERPYKCPEDECGKAFTASHHLKTHIRTHTGERPYPCKESSCEKAFSTSHSLKSHKKTHQRPPSAKAKERKLKKSKFAKAMQQQQDDVADCKQSFKVDSDSSGYIEELQPPSTSSTASSVCQALDDEAILLTDTKPLQSEFFKSTDFNIMQLRYTHAPAQLPEIKQLHNMVALAPKLEAFPLPETSQALQLAYAAEEELPAPWLDAAVLVSKPLLPMARVTPACVALPTEVPSFVDLQTSSYSSLRNNVSDNADPCDFLDDAEHKLCGTELALTNNMQQQQHVMHMEIDQNQESHSLNNVVNNNASLPPLQENIEQLLQEAAFSSDEDMETDSLLNDILMTIDKNEGLLQQTLQQAEQVPDNALGLFEVDLRNEDRPTLKQITADAGICSCTNCKCDQTQDCQGGCSTEKPCTKKSATAKTNKKAIKTTSGCCSHKTVNKTAASPSKREAEMNQNIEDVAVLLQNLASMGGSGGTAGGGCCGGAAAKPIAQPTAPPIGGCCGGGGATAIEETPTAIGCCVGKTSNTIPTATGGCCGGGPGVVDTGCKIPEKPAVSGGGCCATGAASKAVVRSNNTSSCCKPPAQQSNRGAAAAAAPKQAIKSASCTCKSPAEGVANGCCVVICIKTLQALRKVLTRKNMNLMLCPQNQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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