Dani017083.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- zfh1
- Assembly
- GCA_951804985.1
- Location
- OX638132.1:69476968-69483839[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00012 0.015 16.7 0.7 1 23 211 233 211 233 0.95 2 15 0.0065 0.86 11.2 2.4 3 23 241 261 239 261 0.95 3 15 0.00043 0.056 14.9 0.0 1 23 412 434 412 434 0.97 4 15 0.00084 0.11 14.0 0.8 1 23 439 461 439 461 0.98 5 15 0.00021 0.028 15.9 3.7 1 23 493 515 493 515 0.97 6 15 0.013 1.7 10.2 0.3 1 23 542 564 542 564 0.94 7 15 0.15 19 6.9 2.3 1 23 570 593 570 593 0.94 8 15 0.39 51 5.6 0.5 5 19 604 618 601 619 0.91 9 15 0.00019 0.024 16.0 5.6 1 23 628 650 628 650 0.97 10 15 0.23 30 6.3 1.3 2 23 656 677 655 677 0.96 11 15 1.1e-05 0.0014 19.9 0.3 1 23 686 708 686 708 0.98 12 15 0.0055 0.72 11.4 0.2 3 23 716 736 714 736 0.97 13 15 6.6e-05 0.0087 17.5 0.5 1 23 742 764 742 765 0.95 14 15 0.014 1.9 10.1 0.1 1 23 775 797 775 797 0.97 15 15 0.04 5.3 8.7 0.0 1 20 1355 1374 1355 1377 0.93
Sequence Information
- Coding Sequence
- ATGGACGCGCAATCTTTTGGCATTCAATGGATACAACATCATGCATCCGGCGTTGGTGGCGCTCTCAAAACCGAGCATCAATTGCTCACGCTGGACGAGTCACATGTGCCGCAGTCTGATGAACTAATAGATGCCTCCGAGGGGCCTTGTATTGCAGTGCCACAGCATGAGGCGCATCATTATCTGGTGAGCGAGGTGCCAACGGAGGAGGACATTGAACAGATAGCCGCTgagaatttaatatttatggCACACGATGGACAAATGGTTAGCGAGATCATTACAGCAACTACGGATGCAAATGGTGCTGTTGTGGTGAGTGCCAGCGATGGCACGCCCATAAATATCATCAGTCAAAGTGCGGCTATGGCTTTGCATGAGGCGGCGGTGGCAGCAGCTGCTGCAGAAGAAGATGAGACCATGGCACAGCAGGTGCAGTACACGGAGGAGGACTATGCGGAGACGCAAATGGTCACGGAGGAGGTTATCACCGATGATTGGGTGCAACATCAGGGCGAGGAgagAGTGGAAATCTCAGCGGAGCAAATCATCGGCTCCAATGCGCATGTGCCGCTGGAACATGAGGTGCCGCTGCCCACGGTACAGGATGAATATACAGCGCTGCGTCCGTATCCTTGCGATTTTTGCAGTCGTCGTTTTCGCAAAAAGGCCAGTCTTATGAATCACATGGTCGCGCATCAGAATGATCGGCCACATTTGTGCAAATTGTGCGGTTCGCGTTTCTTTCGACGCACCGATCTTATTAATCATTTAAAGGCGCACGCAGAGACGCCCGATCCAGAGTTTGATGATGTCGAgtttATGCATTTCGTGGAACAAGCTGCCATcgatcaacagcaacaacaattgcagCAGCAACACCAGCACGATGATCATTACTATGATCAGGACTGGAATATACAAAGTGTCGCCGCCTCTACCTCTGCCAAGTCTTCGCGCAAGCTCAATAGCAGTGCGAGTGGCTCGGCACCACGCGGACGCATTAGTCGCATTAAACCGAAGATGGAGAATAACTACACCATCGATGAGTCGATGCGTCAAGCCAACAGTGAACAAgagttgcagcagcagcagcacgaGCAACAACACATTGAATATGCCGAATGCCAGGAGTTGCAGGGCTCTGAGGCCACAGTCAAACTGTTGCAGGATACTGCTGAGCCGCTGCAACAGCAGCCGCAGCACTTTCCGATTATTGACGAGAGCAAGCCGTTCGTTTGTCAGCAGTGCGGGTTGGCGTTTGCGCGCGAAAAGGCGTTGCTGGCGCATGCGAAgAACCATCGCAACGACACACACGAGTGCAACCAATGCAACGAAATGTTCTGGGACAGCGCCAGCTTGCAGGAGCACCTTAAGACGCATCAGTTCGAGGACAGCAACTCCGAGTACGAACCCGGCGAGGCGGAGGAGTCACAGAGCGATGACGACTCCGAGGCTGAGTATTTATATGGCGAATTCTATTGCGGCGACTGCGGCATGTCTTTCCATCGGCAGGATCTGTTGCATCGACATGCCAAGCAGCATGTGAAACGCGAGCACGATGCGAATCACAGCAATCACAACAACAGCGCCGGCAGCAGCGGTAGCAACAAAGAGCTGCAACATTGCTGCAGCACGTGCGGCGAAAGTTTCGCTGAGGCATTGGATCTGCTGGCGCACGCAGAGATACACGCGCGTTATCCGCCCTTTAAATGCATTCTTTGCGGCGAGTGTTTCTTCGATGAGACCACCATCAAACGTCATCTGAGCAGCCAGCACGCCAACGAAATGACCGCCAACTCTTGCATTCTCTGTGGCAAACAGTGTCGCGACCGCAAGGCACTCATGAAACATGCCTGGGATCATTCGCGCGAAAAGTGTCACTCGTGCTCCAAGTGTGGCAAGAACTTCCACAACAAGGCGCGACTCAAGCGTCACATGGCATCGCATCGCGACAAGTCTGTCATGTGTGACGTGTGTCACGCTGAGTTTCCCGACGGCCGTACACTCTCCAATCATCGTCACTCGCACAGTGCCACTGCCTCGGGCAAACTTTTCCCCTGCAACGAGTGCGGCAAGACGTTCGGCTCGCGCAGCTCACAGCAGATTCATGTGCGCATTCACACGGGCGAGCGTCCCTATGGGTGTCGCTTCTGCTGGAAGGCCTTCGCCGATGGCGGCACCTTGCGCAAGCACGAACGCATTCATACCGGCGAAAAGCCTTACGCCTGCTCCGTCTGTCCACGTGCCTTCAATCAGCGTGTTGTGTTGCGCGAGCACATTCGCTCGCATCACTCGGGACTGGATTCGAAGCGTGCCACATATCACTGCAGCGTCTGTGGCGCGGATCTGCCGACGTCCGGCGAGCTGATACAGCATCTGATACAGCACAGCGATATGAATACGGCGCTGCAGCGACAGCCAATTACCGGCCCTCGAAAATACAAGCGTCGCCGCAAACTGAAGCCGCACGAGATCGAGCGTCTGCGCACTGAGCACAAAGAGCACGGCGGCATCGTTGGCAGCGACATTGACTTGTCTGACTTTGATATGGATAATGTCGATGATTTACTGGGCCTACAGGAgagcagcaacaataacaatagTGCCACCAGCAACACTACCAACACCACCAATACAACAATCAATAACACTGCCACAAACAGCTCCAGCAAAGCCAAACGTCGTCAGGCAGCAGTGGCGCCTACTGCAGGCAGTGGCGCACACACAGTCGCCGCGATCTCATCATCGCCAACGCCAGATTCATGCTCACCGCAAGCTTCGCCTACAGCGACGACATCGCCGCAACGTTACAAGAACGTCTCAACAAGCGGCAGCAACTCTGACGCTTGGCAGAGTAAATTGCtgcacagcagcaacaactctAACAATGCGGACACCTACAAGTCGTTgctctccaatctggagaatacGCTGCAGTGCATCGACACTTTGGTGGTGCAAAGCAATAGCAGTAGTGGCGGCGGTGCACAATACAACGGCGAACATGCTGTCAAAGCAGAGTCTGCTACAACAGCAGCGCGCGTtcgcagcagcaacagtaaAAAGTCTTCGTCGACGTCGTCGACAGCAGACAAAACATTGTCACGTCCACGCATGATACATACGCAGCGCACGCGCCATGGCGCGACTACATCAACGTCAAATGGCGGTACAAGTGGCGGCGGCAGCAGACGACGACCGCGTACGCAAATCACACGCACGCAGCATGTTACCAAAGTGGAAGAGCAACCGCCGCAGCAACTTCATCATCATCACATTGTCGATGACTATGAAATAATTTCGCCCGACATGCAACCGCCTACACAAATCTCGAGCAGCCCCATACATGGCATAAAGCAAGAGCACAACAACAACCATCACCACCACCAAACGCAGCAGCAGCGCGATTTGTACGACGCGCATCTGCTGCTCGAGGCGACTGCTCTACGCAAGGAAGTCTATGAACGATATAATCCCAGCATTGTCAATGATTTGGAGGATATTTTGCGCTCGCCGGACAAGTCGGAAAAAGGACGGCAACGTTTTTCCAGCGAGTGCTCAACAACGCAATATCTGGCCGAGCAGTCCGAGGAGGAGCAACACTTGATAAAGATTGAACCGACATCGCCAAATATACATGATATTGTTGTTGGTGCTGGTGGCGGCACCGTCTCTGCACGTCGTAATACGCCGCGTGCTGCACGTCGTCGTGCTGTTGCTAACAATCGCAAATACTTGGACTTCGATGAGGAGATAGAGCAACTGGCAAATGGTAACAAGTCGAGCATTAAGCTGACGCCAAAGCAGCTGCAATCGCATGACATCAACGCGGACAAGTCTGCTTATTTGACATACGATGCCTTTGATGTTGCGGATGCAGCAGCTGCTGCCGATGCTGCGGTCGCAACAGCGTCTGTGACTGCCGCGGCCACAGACACTGCCAACTCGTCGTACGCGGTCATAGCAGAGGCAGCTGTTATTGCCGCGGCGCCTGCTTCGAGCGCCgctcaacaacagcagcagcaacaacaggtGCCGCCGTTGCGTAAACAGCGCTACTACGAGTGCGAAATGTGCTCTGCGGAGTTTCCGGATCGGGCGCAGCTGCTGGATCATGTGCCGATACATATTTAG
- Protein Sequence
- MDAQSFGIQWIQHHASGVGGALKTEHQLLTLDESHVPQSDELIDASEGPCIAVPQHEAHHYLVSEVPTEEDIEQIAAENLIFMAHDGQMVSEIITATTDANGAVVVSASDGTPINIISQSAAMALHEAAVAAAAAEEDETMAQQVQYTEEDYAETQMVTEEVITDDWVQHQGEERVEISAEQIIGSNAHVPLEHEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQNDRPHLCKLCGSRFFRRTDLINHLKAHAETPDPEFDDVEFMHFVEQAAIDQQQQQLQQQHQHDDHYYDQDWNIQSVAASTSAKSSRKLNSSASGSAPRGRISRIKPKMENNYTIDESMRQANSEQELQQQQHEQQHIEYAECQELQGSEATVKLLQDTAEPLQQQPQHFPIIDESKPFVCQQCGLAFAREKALLAHAKNHRNDTHECNQCNEMFWDSASLQEHLKTHQFEDSNSEYEPGEAEESQSDDDSEAEYLYGEFYCGDCGMSFHRQDLLHRHAKQHVKREHDANHSNHNNSAGSSGSNKELQHCCSTCGESFAEALDLLAHAEIHARYPPFKCILCGECFFDETTIKRHLSSQHANEMTANSCILCGKQCRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVMCDVCHAEFPDGRTLSNHRHSHSATASGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDSKRATYHCSVCGADLPTSGELIQHLIQHSDMNTALQRQPITGPRKYKRRRKLKPHEIERLRTEHKEHGGIVGSDIDLSDFDMDNVDDLLGLQESSNNNNSATSNTTNTTNTTINNTATNSSSKAKRRQAAVAPTAGSGAHTVAAISSSPTPDSCSPQASPTATTSPQRYKNVSTSGSNSDAWQSKLLHSSNNSNNADTYKSLLSNLENTLQCIDTLVVQSNSSSGGGAQYNGEHAVKAESATTAARVRSSNSKKSSSTSSTADKTLSRPRMIHTQRTRHGATTSTSNGGTSGGGSRRRPRTQITRTQHVTKVEEQPPQQLHHHHIVDDYEIISPDMQPPTQISSSPIHGIKQEHNNNHHHHQTQQQRDLYDAHLLLEATALRKEVYERYNPSIVNDLEDILRSPDKSEKGRQRFSSECSTTQYLAEQSEEEQHLIKIEPTSPNIHDIVVGAGGGTVSARRNTPRAARRRAVANNRKYLDFDEEIEQLANGNKSSIKLTPKQLQSHDINADKSAYLTYDAFDVADAAAAADAAVATASVTAAATDTANSSYAVIAEAAVIAAAPASSAAQQQQQQQQVPPLRKQRYYECEMCSAEFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -