Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_951804985.1
Location
OX638132.1:26033388-26038575[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-14 4.4e-11 43.7 0.2 3 44 642 683 640 685 0.95

Sequence Information

Coding Sequence
atgaataatCTGGGTCCAAAAAAGGACGGAAGTCCAAATGTGGAATTTTTTCAATCATCAGAAACGTTGCATGGCTTCGAATCCATTCGTCAATGGTtgcaaaaaaattgtaaaaaaTATTTGGCTAATAGCCCGGATCCCATTACCAAAGAGTCTCTCTCCCAATTGTTGATACAGTTTCTGCAGTATGTGGAGGCTAAGTTGGGAAAATCTGCGGCGGAGCCACCAGCAACTAGAATACCCATGCGCTGCTTCCTGGATTTTAAATCTGGTGGCGGTCTGTGTGTCATATTCTCGACCATGTTTCGCTTTCGCGCCGAGCAACGCGGCAAAAAGTTCGACTTTTCCATCGGAAAGAATCCTACGCGCAAGGACCCGAATATCCAGTTGCTCATTGACATTGAGCAGGCCTTGGTGGAAGCGGATCTCTATCGCATTCCCTACATTTACATTCGTCCGGAAATAGAGAAAACCTTTGCTACACGTTTGCGTGTCATACTATCGACGCGCCGCGTTGAGATTGTTACCGACGAAGATGACGCTACGCATATAATTTACCCAGTGGTTGATCCGCATCCCGATGAATATGCTCGGCCCATTTTTAAACGCGGTGGCAACGTCATGTTGCACTGGTACTACTTTCCAGAATCATACGACACCTGGTCATCAAACTCTTTCGATTTGCCGGACAACGTGCCCGAGAATCCGGAGTCACCGGCAGAACGTTGGCGCGTTTCGGCCTCATGGATTCTGGACTTGGAGCAATACAACGAATGGATGGCAGAGGAGGACTACGAAGTCGATGACAACGGCAAGAAGAAGACGCACAAACAGCGCTTGTCCATCGATGATATTATGGCCTTTGCCGATGACAAGAAGAAGGCGAGCACCAGCGGTGCTGCTAAACAAAAGCGACGACGTTCGCCATCCCCATCGTCTGCCTCAAAGCCGGGCAAACGCAAGCGTTCGCCGGCCGTACTGCAGAAAAAGTCGCGCAATGATGACGAAGACGAGGATTTGACGCGTGACATGGATGATCCGCCAGCAGAGCCCAACATACAGGAGGTCATTAAAACTGCGACATTGCAGTCGACCGCCAGTCCTGCACCGGTTGTCAAGTCGCGTGGCGATAATGACATGATGCCAATCAAAGGTGGCACCATTACTGACTTGGACGATGAAATGACTGGCGGCAGTGCTACGCACGCGATGTCTGTCTGCGATGGCGAAAATTCGCAGACGGGCAAAACAAGTGAAAATAGCAACACGCAGGAGTTCTCTTCGTCCGCCAAGGAAGACATGGAGGACAATGTCACCGAGCAGACACACCACATAATAGTTCCATCGTACTCGGCTTGGTTTGATTACAATTCGATCCATGTGATCGAGAAACGTGCGATGCCAGAATTTTTCAACAGCAAGAACAAGTCGAAGACGCCAGAGATTTACATGGCTTATCGTAATTTTATGATTGATACTTATAGATTAAATCCTACGGAGTACTTGACCAGCACCGCATGTCGTCGCAACCTGGCCGGCGATGTATGCGCCATCATGCGCGTTCATGCATTCCTCGAGCAGTGGGGTCTTATCAATTATCAGATCGACGCCGACTTGCGCCCCACTCCAATGGGACCGCCACCAACATCGCATTTTCATATATTGTCCGACACACCATCCGGCCTGCAGTCGCTCAATCCGCAAAAAACGCAGCAGCCATCAGCTGCTAAAACCCTGTTGGACTTGGACAAGAAGGAGAAGAAAGAAGGGTCTGTGGAAGCGGACAAACCGGGAGCAGGGCTCACTATTAAAACGGAAACCATCGAGAATGGTTCTGGCACTGGTCAATTTGGTCTAAAGCTGGATCAATACACCAAGAAGCCAGCAGCGATGAAAAATCGCACTGCCGCTAGTATGGCGCGCGAGTGGTCTGATCAGGAGACACTACTCTTGCTGGAGGGATTGGAGATGCACAAGGATGACTGGAACAAAGTGTGCGAACATGTGGGCACACGCACTCAGGATGAATGCATCTTGCATTTCCTGCGTTTACCCATCGAGGATCCGTACTTGGAGGAGGATGGCGGCTTTTTGGGTCCGCTCGGTTGTCAGCCGATACCGTTTAGTAAGTCGGGAAATCCCATAATGTCAACGGTGGCCTTTTTGGCCTCGGTGGTGGATCCCAGAGTTGCAGCAGCTGCAGCAAAGGCTGCTATGGAGGAATTTTCAACAATTAAAGATGAAGTTCCTGCCACAATTATGGATACTCATATGAAGAACGTGGAAAAGGCTTCGGCCTCTGGCAAGTTTAATCCAACCTTTGGCCTGGCGAACAGCGGCATTGCTGGCACTGGCATGGACAAAGAAGACGATGATCAAAATGCAGCATCCGCTCACGACGAAGAAATGAAAGATATTTCAAAGAAAGATTTAGCTGTGTCCAAACCAACCGACGACAAAGACAAACCAGAAAAAGACGACGAAAATAGCAGTAGTAGTACCGCTGCTAAAGAATCTACCGACTCAAATAAAACTACCTCTACCACAGATGAAAAAGATATCAAGCTTGAGGAGGCCAATGAAGGCGCCGATCCAGCAACTACCAAGGATGCCGATGCCACTAAGCAGACATTCAACGAGTCCAACGTGCAGACAGCTGCAGCTGCTGCACTGGCTTCGGCCGCTGTCAAAGCTAAGCATTTGGCGGCTCTGGAAGAGCGCAAAATTAAGTCGTTGGTTGCGCTGTTAGTTGAAACGCAAATGAAGAAGTTGGAAATTAAATTGCGCCACTTCGAGGAGCTCGAGACGACAATGGAGCGTGAGCGCGAAGGTTTGGAATATCAACGGCAGCAGTTGATTACCGAACGCCAGCAATTCCACTTGGAACAACTGAAGGCAGCCGAATTCCGCGCCAGGCAGCAGGCCCATCACCGCCTGCAGCAGGAGCAACAGTGGCAAGGCGGTGCCGCTGGACCGCCCGGAGGACCAGGCCAGCCACTACCCGCCGGTGCAGCACCAGCGACCGGAGCGTCACAAATGCCGCCAGTTGTTGGTGCATCGCCAGCTGGTGTTCCACCGGGCCCAGCTGGTGCTACGTCGCAACAGGCACCCTCGACCGCACCGCATGCAGTCGGAATTGGGCAACAACCAGCCACACCCATGGAAACAACACAATCGTCAACAATGTCAGGCTCTGGCGACATTTCGACTGCTCTCGCAGCTCCTAGTGCAGCAACTCAACAACCAACGAATATCGCATCAACCATGGGAGTCCCTGCCAGCGCACAGCCACCTTCGACTATTTCGCAAGTGCCAAGCGGCGTTCCTCCCGGCAATAATCCACCAGCAGCACAGCCCTAA
Protein Sequence
MNNLGPKKDGSPNVEFFQSSETLHGFESIRQWLQKNCKKYLANSPDPITKESLSQLLIQFLQYVEAKLGKSAAEPPATRIPMRCFLDFKSGGGLCVIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIDIEQALVEADLYRIPYIYIRPEIEKTFATRLRVILSTRRVEIVTDEDDATHIIYPVVDPHPDEYARPIFKRGGNVMLHWYYFPESYDTWSSNSFDLPDNVPENPESPAERWRVSASWILDLEQYNEWMAEEDYEVDDNGKKKTHKQRLSIDDIMAFADDKKKASTSGAAKQKRRRSPSPSSASKPGKRKRSPAVLQKKSRNDDEDEDLTRDMDDPPAEPNIQEVIKTATLQSTASPAPVVKSRGDNDMMPIKGGTITDLDDEMTGGSATHAMSVCDGENSQTGKTSENSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTQQPSAAKTLLDLDKKEKKEGSVEADKPGAGLTIKTETIENGSGTGQFGLKLDQYTKKPAAMKNRTAASMAREWSDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEEDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFSTIKDEVPATIMDTHMKNVEKASASGKFNPTFGLANSGIAGTGMDKEDDDQNAASAHDEEMKDISKKDLAVSKPTDDKDKPEKDDENSSSSTAAKESTDSNKTTSTTDEKDIKLEEANEGADPATTKDADATKQTFNESNVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGGAAGPPGGPGQPLPAGAAPATGASQMPPVVGASPAGVPPGPAGATSQQAPSTAPHAVGIGQQPATPMETTQSSTMSGSGDISTALAAPSAATQQPTNIASTMGVPASAQPPSTISQVPSGVPPGNNPPAAQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01414914;
90% Identity
-
80% Identity
-