Basic Information

Gene Symbol
HERC2
Assembly
GCA_951804985.1
Location
OX638132.1:25262765-25272070[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.8 4.8e+03 -1.2 0.1 32 44 225 237 221 238 0.84
2 6 0.36 9.6e+02 1.0 0.0 22 46 252 278 249 278 0.82
3 6 1.8e-10 4.8e-07 30.8 0.0 1 44 284 328 284 330 0.93
4 6 5.4e-08 0.00014 22.9 0.0 3 43 340 384 339 387 0.86
5 6 5.7e-12 1.5e-08 35.6 0.0 3 46 395 439 393 439 0.92
6 6 5e-11 1.3e-07 32.6 0.0 3 45 447 490 445 491 0.95

Sequence Information

Coding Sequence
atggAGGAATCTGACAGCAATGAAAAGTGCTTTAATGTAGAAAATGCAGATGAAGAGCAGgaaaatgatgatgacgatgattaCCAAGAGGATGAGGAGGAGGAGGACGAAGAGGAGGATGATGAAGTCGATGATACACAAGAAAATTTAGACCTGGATGATACTAAGATATCCGCTTGGAAATACAGGTCATCATACGAAAATGACATATACATCGATGGAATAAAGCAACTGCTGAAACAGCATCGGCCGGTGTGCAACGCCAATGCACTGGTGCTGAACAAAGAGATGCAGGCACAGCTGGTGACTGTTCGCGACAATGTGCAGCGTCTGTTGCAACACATTCAGAAGGTGTACGATGAAAATGAGGACCGTCTCAAGAATGGCATGAAGTACAAAAGGCGGGGCATGGGTATACGTGGTGCCTATTTGCAGGGTGGCACCTTCTATTTCAAGGGTAACATGTTCTTTAAGGACGTGAACTGTCGCAACTGTCCAAACAATCCGGACTATACATACCGCAGCGAGGTGCAGCACGAAATGTTTCCCATGGACTATGAGTTGCGTGGACGGCATGTTTGGTCGGTGATGGATAAGTTTGGCATAGTGCGCGGTATCAAGGAGCAGGCCATCGAGTACTTGGAACGCAAACAAAAGAAGCCCAAGACCAAAAACCGTCGTGACAAGGACATCAAGCTCTACACGCGCAAATTGTCTGCGCTTTTGCCGCAAATCGATGACGGCTTTGAAATCGATTGGAATCTCATTGGCATGCATACGCTCAAACATCGCCATACGCCAAGCAGTTGCGAAGCAATGTGGAATGTTTATCTCAAGCCTTCGTTGAAACGTGGTGGCTGGAGCAAAGAGGAAAACGCAGTCTTAATCACTGCCGCAAAGCGTTACAACTTCGAGAATTGGCAAGCTATAGCCGATGAGGTCGGACATCGTTCGGACTATCAGTGTTTCGTGCAGTTTCAGACTACGGTCGCATTCATGCTAAGGACCAAATGGGTTAAATGGACGCCACAGGAGGACGCGCGACTATTGCATTTAATTTCCACCTACTCGCAGAACGGCGTCATCAACTGGAATGCGGTGTCGGCGCGATTTCCGCAACGTAGCAAATCGCGCGCCATGTCGCGCTACATGTACACCCTCAATCCACAAATCAGTCATGCACCTTTTACGCCGCAGGAAGATCTCACTCTGCTGGCCGCTGTCAAAGAGTACGGCGAGAATTTCTCCTGCATACCACGCACCTTTTTTCCGAATCGCACCTCGGTGCAGTTGCGCAGTCGCTACAAAAACACACTCATGCATCGCAGCAAACACCAGGGATGGACCAAAGCGGATGACCAACTTCTAATGGACTTCGTCGCCAAACATGGCCAATCGAGTTGGGTGAAGTGCGCCGAACTGCTTCCTACACACACGCGCACTGGTTGCCGCACGCGCTTCTTAACCATCAAAAATTTTCTCGAAAAGAATCCAAACGCCACAGTCGACGATTTACCGCGCAAATTTCGTTGTCCCTCCAACAGTATCACCACCGATAACTGGGCAGAGAAAATCATTGAGTTGCGCAACAATCCCAACGCCACCCTCCTAATACACAAACGGCGGCCAAAACGCATCTGGAAACAGATTGATAAGGATAAGCAAACTGCAAAAAGGGCTGCTGAAAGGGAAAGAAGGGCGGCTGAAAAGCCGCCGACGCCACCACCGCCCACACCACCAGAGCCCGTAGTCAAACCACCCCGGATACCGTACGTCAGAAAAAAGTCGCCCTACATCAAGCGGATACGTTCTATCGAGCTGCGAATGTACAACTATTTTAAGTACGCCTACAATTTCCGTATAGCTGTCAATCCGTGCAACGCGCCACCACAAACACCGCATACGCTGCAGCTGGTGCAGGCAGCCTGCGGATTTCAGGCGCGTCCGAATTTTTACTTTCGCATCGACAGACCCACATTGCCCAATAATGTAGCTGAACACTGTCATGCTGTGCTGAGCAAATGCAGCACTGAATCTTTGGCTGAATCGCCACTCATGGGATTTACGTTGCCACCGAACTGGTCGTCGCTATGCGGTTTTCGTGCCATGTGCGTGCTGTCGGCGCAAGTGCAGACAGCAGACGCCACGGCTgcgaaacaaacaacaaatttaGTAGCTGCCAAGGTGGAAAATACTGAAGCTGTACAGCTGCTGCGTCAGCGCTTGCGTACGCTCTTTTACAAGACGGGGCTGCTCAGTCGACTGCATCCGAACAATATCGGCGACATGGCGACCGGGCTGCAAAATCAAATGGCGAGCATTGGTGAAGGCGAAACAACAACGACAGAAGCAAGCATTGCCGAGGTCCAGTCGCTGATGGGGAAGTCGACGGACTATCGAAAACGTCCGCGGAAGCGCAAGACGgataaagtttcaaaaaatctgAAACAGGAGAAAATACCACAACCTGAAGCGACGACACCTAAACGGCCAAAAGTGGAATGTGTCACAGGTGAAGAATATATAGCCGACATCAAGCAAGATCCCGCCGATAAGGCAATGATCGTGGTTGATCCGTTTGCTGGCAATATTCGAATAAAATCTGATCCGCACGAGGAGTTCATTGATATTTCGTAtcGGCTGAGTCTCTTATATGTCTATAAACAATGCGAGTGGTTCCAATGGCGCGATGGCGACTTTGGCAAGCTAGGACGTGGCGGCTCGGAAGGTTCATCGATACCGCATGAAATGGAACGACAAATTGGCGTCACGTGA
Protein Sequence
MEESDSNEKCFNVENADEEQENDDDDDYQEDEEEEDEEEDDEVDDTQENLDLDDTKISAWKYRSSYENDIYIDGIKQLLKQHRPVCNANALVLNKEMQAQLVTVRDNVQRLLQHIQKVYDENEDRLKNGMKYKRRGMGIRGAYLQGGTFYFKGNMFFKDVNCRNCPNNPDYTYRSEVQHEMFPMDYELRGRHVWSVMDKFGIVRGIKEQAIEYLERKQKKPKTKNRRDKDIKLYTRKLSALLPQIDDGFEIDWNLIGMHTLKHRHTPSSCEAMWNVYLKPSLKRGGWSKEENAVLITAAKRYNFENWQAIADEVGHRSDYQCFVQFQTTVAFMLRTKWVKWTPQEDARLLHLISTYSQNGVINWNAVSARFPQRSKSRAMSRYMYTLNPQISHAPFTPQEDLTLLAAVKEYGENFSCIPRTFFPNRTSVQLRSRYKNTLMHRSKHQGWTKADDQLLMDFVAKHGQSSWVKCAELLPTHTRTGCRTRFLTIKNFLEKNPNATVDDLPRKFRCPSNSITTDNWAEKIIELRNNPNATLLIHKRRPKRIWKQIDKDKQTAKRAAERERRAAEKPPTPPPPTPPEPVVKPPRIPYVRKKSPYIKRIRSIELRMYNYFKYAYNFRIAVNPCNAPPQTPHTLQLVQAACGFQARPNFYFRIDRPTLPNNVAEHCHAVLSKCSTESLAESPLMGFTLPPNWSSLCGFRAMCVLSAQVQTADATAAKQTTNLVAAKVENTEAVQLLRQRLRTLFYKTGLLSRLHPNNIGDMATGLQNQMASIGEGETTTTEASIAEVQSLMGKSTDYRKRPRKRKTDKVSKNLKQEKIPQPEATTPKRPKVECVTGEEYIADIKQDPADKAMIVVDPFAGNIRIKSDPHEEFIDISYRLSLLYVYKQCEWFQWRDGDFGKLGRGGSEGSSIPHEMERQIGVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-