Dani028582.2
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- bab1
- Assembly
- GCA_951804985.1
- Location
- OX638134.1:89318294-89320093[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-17 4.4e-14 52.9 0.0 1 43 55 98 55 100 0.95 2 3 3.9 1.3e+04 -3.0 2.2 4 22 195 216 192 219 0.64 3 3 4.3 1.4e+04 -3.1 0.1 4 11 311 318 309 318 0.84
Sequence Information
- Coding Sequence
- ATGTTGGAGAATTCGCACTCGTGGATGGGCGCATCGACCTCCTCAATTGCAGCAGACAGTTATCAGTACCAATTGCAATCCATGTGGCAGAAGTGCTGGAACACTAACCAAAATCTCATGCATCATCTGCGCTTTCGCGAACGCGGCCCCCTCAAGTCCTGGCGCCCCGAGACAATGGCCGAGGCCATTTTCAGCGTGCTCAAAGAGGGTCTCTCGTTGTCGCAGGCAGCGCGTAAATACGACATTCCGTATCCGACCTTCGTGCTCTATGCGAATCGGGTGCACAACATGCTGGGACCCTCCATCGATGGTGGACCCGACTTGCGACCCAAGGGCCGTGGACGGCCGCAGCGCATACTGCTGGGCATCTGGCCGGATGAGCACATCAAGGGTGTCATCAAGACGGTTGTCTTTCGTGATGCCAAAGAAATAAAAGACGACAGCCTGGCGCATCTGCCATATGGCAGGCATTCGCCCGTGTTTCCGTTTCAAGACAGTCATCTCAACTATCCGGGCATGGGTGGACCCTGCCCCAATGGCATGCCCACGCCTACGCCCACCGGCGATCAAATGTCTCAAGAGGCCACCGCAGCCGCAGTGGCTGCCGTCGCACACAACCTGCGTCAACAAATGCAACTCGCAGCGGCGGCGCAGCACCAACATGCCGAAGGACCGCCGGGCGGTAATCTTTTCAATATACCGCCGCACCTGCAACCGCATCTggcggcagcagcagctgcGGGTGGCGCAGGGGCGTCCGGCGCAATGCCAGGCACAGGGCCGGCTGGCATCGCTCTTCCGAAGCAAAGCATTTCACCTGCAACCAGTTCTACGTCGAATCCCGGTAGTTCGCTGTTAGGTCCGCCGCGGCATGGACAGTCGCCTTGTGCCGCCGGTGGTGGGCTGCCAGTATTGCCAAGTTTGCCGCCTGCCATGGCCGCCGCTCTGCATATGGCAGGCGGTCCACTGGGACGTAACGATGCCAGTTCCGCAGCAGCCATGTTGAATCAGCAGCATCAACTGCAACAGATGCatctgcagcagcaacatgcgCTGCATCAGcaccaacagcaacagcagcagcaacatcagcagcagcaacaacatcagcagcagcaacaccaacagcatcagcagcaacaccaacaacaccaacaacagaTGCAGCATCACCAACAGCAACATTTACCCACTCACATGTCGTTTCATCCGTCTGCAGCAGCCAGCACAtcggcggcagcagcaacatccaCGTTACTACGtcatcagcaacagcaacaagcaGCAAACGCTGCACATTCCGCCTCCTCTtccacagcagcagcatcaactTCGTCCAGCAAGCATCAAAAATCGCCACATCAGGAGCGACTTCACAGCAGTCCTGGCGACAAGTCGCTTCATTCACCGCTTGCCGACATCGGATTGGACACTGGTGTCGCCGTCGGCGTCAGCGGCATGGCCTACAAACCGTCGCGCGGCTATTCGCCACCACGTGCCGAGCACCTCTTCCAGGAGGACATCACCGACTTGGTTGGCGGATCCACAACATCGTCGACGTTGTCGTCGGTTGTTGCCACGACAACAGCAACGTCCTCCAGCGTCATCACAGCAGCGACTACGTCCAGCAGCACCAGCGGCAGCAGCTGCATCAAAATCGAGCCGATTACCATTAGTAGCGAATGA
- Protein Sequence
- MLENSHSWMGASTSSIAADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKEIKDDSLAHLPYGRHSPVFPFQDSHLNYPGMGGPCPNGMPTPTPTGDQMSQEATAAAVAAVAHNLRQQMQLAAAAQHQHAEGPPGGNLFNIPPHLQPHLAAAAAAGGAGASGAMPGTGPAGIALPKQSISPATSSTSNPGSSLLGPPRHGQSPCAAGGGLPVLPSLPPAMAAALHMAGGPLGRNDASSAAAMLNQQHQLQQMHLQQQHALHQHQQQQQQQHQQQQQHQQQQHQQHQQQHQQHQQQMQHHQQQHLPTHMSFHPSAAASTSAAAATSTLLRHQQQQQAANAAHSASSSTAAASTSSSKHQKSPHQERLHSSPGDKSLHSPLADIGLDTGVAVGVSGMAYKPSRGYSPPRAEHLFQEDITDLVGGSTTSSTLSSVVATTTATSSSVITAATTSSSTSGSSCIKIEPITISSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -